RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 SPG7Q9UQ90 795 aa8.93□□□□□ -0.98
MED28-201ENST00000237380 TATP17735 454 aaPredicted RBP8.93□□□□□ -0.98
MED28-201ENST00000237380 GNAI1P63096 354 aa8.93□□□□□ -0.98
MED28-201ENST00000237380 ARHGAP5Q13017 1502 aa8.93□□□□□ -0.98
MED28-201ENST00000237380 HIRIP3Q9BW71 556 aaPredicted RBP8.93□□□□□ -0.98
MED28-201ENST00000237380 RILPL2Q969X0 211 aa8.93□□□□□ -0.98
MED28-201ENST00000237380 ZKSCAN2Q63HK3 967 aa8.93□□□□□ -0.98
MED28-201ENST00000237380 PPP4R3AQ6IN85 833 aa8.93□□□□□ -0.98
MED28-201ENST00000237380 NACAP1Q9BZK3 213 aa8.93□□□□□ -0.98
MED28-201ENST00000237380 PPP1R1BQ9UD71 204 aaPredicted RBP8.93□□□□□ -0.98
MED28-201ENST00000237380 MYOM3Q5VTT5 1437 aa8.92□□□□□ -0.98
MED28-201ENST00000237380 IRX6P78412 446 aaPredicted RBP8.92□□□□□ -0.98
MED28-201ENST00000237380 ERCC4Q92889 916 aaPredicted RBP8.92□□□□□ -0.98
MED28-201ENST00000237380 PDE4CQ08493 712 aa8.92□□□□□ -0.98
MED28-201ENST00000237380 ZNF692Q9BU19 519 aaPredicted RBP8.92□□□□□ -0.98
MED28-201ENST00000237380 SLF2Q8IX21 1173 aa8.92□□□□□ -0.98
MED28-201ENST00000237380 GAPVD1Q14C86 1478 aa8.92□□□□□ -0.98
MED28-201ENST00000237380 TEX35Q5T0J7 233 aa8.92□□□□□ -0.98
MED28-201ENST00000237380 CCP110O43303 1012 aa8.92□□□□□ -0.98
MED28-201ENST00000237380 ZFYVE27Q5T4F4 411 aa8.92□□□□□ -0.98
MED28-201ENST00000237380 ANKLE2Q86XL3 938 aa8.92□□□□□ -0.98
MED28-201ENST00000237380 SMARCE1Q969G3 411 aa8.92□□□□□ -0.98
MED28-201ENST00000237380 KAT6BQ8WYB5 2073 aa8.92□□□□□ -0.98
MED28-201ENST00000237380 POTEJP0CG39 1038 aa8.91□□□□□ -0.98
MED28-201ENST00000237380 MCTP1Q6DN14 999 aa8.91□□□□□ -0.98
MED28-201ENST00000237380 MYBBP1AQ9BQG0 1328 aaKnown RBP8.91□□□□□ -0.98
MED28-201ENST00000237380 TDRD9Q8NDG6 1382 aaKnown RBP8.91□□□□□ -0.98
MED28-201ENST00000237380 HSP90AA2PQ14568 343 aaPredicted RBP8.91□□□□□ -0.98
MED28-201ENST00000237380 CCDC30Q5VVM6 783 aa8.91□□□□□ -0.98
MED28-201ENST00000237380 TRAK1Q9UPV9 953 aa8.91□□□□□ -0.98
MED28-201ENST00000237380 EHMT1Q9H9B1 1298 aa8.91□□□□□ -0.98
MED28-201ENST00000237380 MAGEC2Q9UBF1 373 aaPredicted RBP8.91□□□□□ -0.98
MED28-201ENST00000237380 STIM1Q13586 685 aa8.91□□□□□ -0.98
MED28-201ENST00000237380 CCDC112Q8NEF3 446 aa8.91□□□□□ -0.98
MED28-201ENST00000237380 CCDC158Q5M9N0 1113 aa8.9□□□□□ -0.98
MED28-201ENST00000237380 WIZO95785 1651 aa8.9□□□□□ -0.98
MED28-201ENST00000237380 DAPK1P53355 1430 aa8.9□□□□□ -0.98
MED28-201ENST00000237380 B4GALNT3Q6L9W6 998 aa8.9□□□□□ -0.98
MED28-201ENST00000237380 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.9□□□□□ -0.99
MED28-201ENST00000237380 INTS3Q68E01 1043 aaKnown RBP8.9□□□□□ -0.99
MED28-201ENST00000237380 DHX37Q8IY37 1157 aaKnown RBP8.9□□□□□ -0.99
MED28-201ENST00000237380 SPDYE4A6NLX3 237 aa8.89□□□□□ -0.99
MED28-201ENST00000237380 LETM1O95202 739 aaPredicted RBP8.89□□□□□ -0.99
MED28-201ENST00000237380 PROSER2Q86WR7 435 aaPredicted RBP8.89□□□□□ -0.99
MED28-201ENST00000237380 C16orf71Q8IYS4 520 aaPredicted RBP8.89□□□□□ -0.99
MED28-201ENST00000237380 CNTROBQ8N137 903 aa8.89□□□□□ -0.99
MED28-201ENST00000237380 NEBLO76041 1014 aa8.89□□□□□ -0.99
MED28-201ENST00000237380 FILIP1LQ4L180 1135 aa8.89□□□□□ -0.99
MED28-201ENST00000237380 DACH1Q9UI36 760 aa8.89□□□□□ -0.99
MED28-201ENST00000237380 JMYQ8N9B5 988 aa8.89□□□□□ -0.99
MED28-201ENST00000237380 FHOD3Q2V2M9 1422 aa8.89□□□□□ -0.99
MED28-201ENST00000237380 CENPQQ7L2Z9 268 aaPredicted RBP8.89□□□□□ -0.99
MED28-201ENST00000237380 GOLGA6L3A6NEY3 463 aa8.89□□□□□ -0.99
MED28-201ENST00000237380 PDCP20941 246 aa8.89□□□□□ -0.99
MED28-201ENST00000237380 DNAJC2Q99543 621 aaKnown RBP8.88□□□□□ -0.99
MED28-201ENST00000237380 MAP3K9P80192 1104 aa8.88□□□□□ -0.99
MED28-201ENST00000237380 SASS6Q6UVJ0 657 aa8.88□□□□□ -0.99
MED28-201ENST00000237380 RABEP1Q15276 862 aa8.88□□□□□ -0.99
MED28-201ENST00000237380 NLRP2Q9NX02 1062 aa8.88□□□□□ -0.99
MED28-201ENST00000237380 ANO2Q9NQ90 1003 aa8.88□□□□□ -0.99
MED28-201ENST00000237380 BMP2KQ9NSY1 1161 aaPredicted RBP8.88□□□□□ -0.99
MED28-201ENST00000237380 SMC2O95347 1197 aa8.88□□□□□ -0.99
MED28-201ENST00000237380 WASHC4Q2M389 1173 aa8.88□□□□□ -0.99
MED28-201ENST00000237380 PPP4R3BQ5MIZ7 849 aa8.88□□□□□ -0.99
MED28-201ENST00000237380 ARGLU1Q9NWB6 273 aaPredicted RBP8.88□□□□□ -0.99
MED28-201ENST00000237380 HSPA5P11021 654 aaKnown RBP8.88□□□□□ -0.99
MED28-201ENST00000237380 MCM2P49736 904 aa8.88□□□□□ -0.99
MED28-201ENST00000237380 CCDC73Q6ZRK6 1079 aa8.88□□□□□ -0.99
MED28-201ENST00000237380 TSPYL4Q9UJ04 414 aa8.88□□□□□ -0.99
MED28-201ENST00000237380 EIF2S2P20042 333 aaKnown RBP8.88□□□□□ -0.99
MED28-201ENST00000237380 DRC1Q96MC2 740 aa8.88□□□□□ -0.99
MED28-201ENST00000237380 NAP1L1P55209 391 aaKnown RBP8.88□□□□□ -0.99
MED28-201ENST00000237380 EZRP15311 586 aaKnown RBP8.87□□□□□ -0.99
MED28-201ENST00000237380 CCDC150Q8NCX0 1101 aa8.87□□□□□ -0.99
MED28-201ENST00000237380 FKBP5Q13451 457 aaPredicted RBP8.87□□□□□ -0.99
MED28-201ENST00000237380 STARD3NLO95772 234 aa8.87□□□□□ -0.99
MED28-201ENST00000237380 ANKRD1Q15327 319 aa8.87□□□□□ -0.99
MED28-201ENST00000237380 SOGA3Q5TF21 947 aa8.87□□□□□ -0.99
MED28-201ENST00000237380 GNAI3P08754 354 aa8.87□□□□□ -0.99
MED28-201ENST00000237380 CETN2P41208 172 aa8.87□□□□□ -0.99
MED28-201ENST00000237380 RAB3GAP2Q9H2M9 1393 aa8.87□□□□□ -0.99
MED28-201ENST00000237380 KRT18P05783 430 aaKnown RBP8.87□□□□□ -0.99
MED28-201ENST00000237380 NOM1Q5C9Z4 860 aaKnown RBP8.87□□□□□ -0.99
MED28-201ENST00000237380 ABTB2Q8N961 1025 aa8.87□□□□□ -0.99
MED28-201ENST00000237380 CALRP27797 417 aaKnown RBP8.87□□□□□ -0.99
MED28-201ENST00000237380 TRAF1Q13077 416 aa8.87□□□□□ -0.99
MED28-201ENST00000237380 CDKL5O76039 1030 aa8.86□□□□□ -0.99
MED28-201ENST00000237380 LRRC45Q96CN5 670 aa8.86□□□□□ -0.99
MED28-201ENST00000237380 CCDC57Q2TAC2 916 aa8.86□□□□□ -0.99
MED28-201ENST00000237380 CCDC146Q8IYE0 955 aa8.86□□□□□ -0.99
MED28-201ENST00000237380 GRIN2BQ13224 1484 aa8.86□□□□□ -0.99
MED28-201ENST00000237380 PPP1R12BO60237 982 aaPredicted RBP8.86□□□□□ -0.99
MED28-201ENST00000237380 ATF7IPQ6VMQ6 1270 aa8.86□□□□□ -0.99
MED28-201ENST00000237380 CNNM1Q9NRU3 951 aa8.86□□□□□ -0.99
MED28-201ENST00000237380 SLC52A1Q9NWF4 448 aa8.86□□□□□ -0.99
MED28-201ENST00000237380 ANKRD45Q5TZF3 282 aa8.86□□□□□ -0.99
MED28-201ENST00000237380 SEPT7Q16181 437 aaKnown RBP8.86□□□□□ -0.99
MED28-201ENST00000237380 TRIM22Q8IYM9 498 aa8.86□□□□□ -0.99
MED28-201ENST00000237380 CCDC191Q8NCU4 936 aa8.86□□□□□ -0.99
MED28-201ENST00000237380 NUTM2FA1L443 756 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms