RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 PIK3C2BO00750 1634 aa21.15■□□□□ 0.98
LTBR-201ENST00000228918 MORC1Q86VD1 984 aa21.15■□□□□ 0.98
LTBR-201ENST00000228918 NINLQ9Y2I6 1382 aa21.14■□□□□ 0.97
LTBR-201ENST00000228918 FAM161AQ3B820 660 aa21.14■□□□□ 0.97
LTBR-201ENST00000228918 GGT6Q6P531 493 aa21.14■□□□□ 0.97
LTBR-201ENST00000228918 WWC1Q8IX03 1113 aa21.14■□□□□ 0.97
LTBR-201ENST00000228918 SLC12A5Q9H2X9 1139 aa21.14■□□□□ 0.97
LTBR-201ENST00000228918 ARHGEF28Q8N1W1 1705 aaKnown RBP21.14■□□□□ 0.97
LTBR-201ENST00000228918 C8orf34Q49A92 452 aa21.13■□□□□ 0.97
LTBR-201ENST00000228918 LAS1LQ9Y4W2 734 aaKnown RBP21.13■□□□□ 0.97
LTBR-201ENST00000228918 NPM1P06748 294 aaKnown RBP eCLIP21.12■□□□□ 0.97
LTBR-201ENST00000228918 TMEM132EQ6IEE7 984 aa21.12■□□□□ 0.97
LTBR-201ENST00000228918 OSCARQ8IYS5 282 aa21.12■□□□□ 0.97
LTBR-201ENST00000228918 NEXMIFQ5QGS0 1516 aa21.11■□□□□ 0.97
LTBR-201ENST00000228918 PDE3AQ14432 1141 aa21.11■□□□□ 0.97
LTBR-201ENST00000228918 TULP4Q9NRJ4 1543 aa21.1■□□□□ 0.97
LTBR-201ENST00000228918 VIRMAQ69YN4 1812 aaKnown RBP21.1■□□□□ 0.97
LTBR-201ENST00000228918 CGNL1Q0VF96 1302 aa21.1■□□□□ 0.97
LTBR-201ENST00000228918 RUNDC1Q96C34 613 aa21.09■□□□□ 0.97
LTBR-201ENST00000228918 USP35Q9P2H5 1018 aa21.09■□□□□ 0.97
LTBR-201ENST00000228918 PPM1GO15355 546 aaPredicted RBP21.09■□□□□ 0.97
LTBR-201ENST00000228918 TNNT2P45379 298 aaPredicted RBP21.08■□□□□ 0.96
LTBR-201ENST00000228918 PHF23Q9BUL5 403 aaPredicted RBP21.08■□□□□ 0.96
LTBR-201ENST00000228918 RGS3P49796 1198 aa21.07■□□□□ 0.96
LTBR-201ENST00000228918 PUS7Q96PZ0 661 aaKnown RBP21.07■□□□□ 0.96
LTBR-201ENST00000228918 NEFMP07197 916 aa21.07■□□□□ 0.96
LTBR-201ENST00000228918 DIP2CQ9Y2E4 1556 aa21.06■□□□□ 0.96
LTBR-201ENST00000228918 ANKRD36BQ8N2N9 1353 aa21.06■□□□□ 0.96
LTBR-201ENST00000228918 NSD2O96028 1365 aa21.05■□□□□ 0.96
LTBR-201ENST00000228918 NEO1Q92859 1461 aa21.05■□□□□ 0.96
LTBR-201ENST00000228918 TCP11L2Q8N4U5 519 aa21.04■□□□□ 0.96
LTBR-201ENST00000228918 EVC2Q86UK5 1308 aa21.04■□□□□ 0.96
LTBR-201ENST00000228918 IGHDP01880 384 aa21.03■□□□□ 0.96
LTBR-201ENST00000228918 MTHFSP49914 203 aa21.03■□□□□ 0.96
LTBR-201ENST00000228918 CLUAP1Q96AJ1 413 aa21.03■□□□□ 0.96
LTBR-201ENST00000228918 RRP7AQ9Y3A4 280 aaKnown RBP21.03■□□□□ 0.96
LTBR-201ENST00000228918 CANXP27824 592 aaKnown RBP21.03■□□□□ 0.96
LTBR-201ENST00000228918 NEUROD2Q15784 382 aa21.02■□□□□ 0.96
LTBR-201ENST00000228918 WDR63Q8IWG1 891 aa21.02■□□□□ 0.96
LTBR-201ENST00000228918 PANK1Q8TE04 598 aa21.02■□□□□ 0.96
LTBR-201ENST00000228918 CFAP53Q96M91 514 aa21.02■□□□□ 0.96
LTBR-201ENST00000228918 ARHGAP31Q2M1Z3 1444 aa21.02■□□□□ 0.96
LTBR-201ENST00000228918 VGFO15240 615 aaPredicted RBP21.02■□□□□ 0.95
LTBR-201ENST00000228918 ADGRB2O60241 1585 aa21.01■□□□□ 0.95
LTBR-201ENST00000228918 CCDC27Q2M243 656 aa21.01■□□□□ 0.95
LTBR-201ENST00000228918 ANO8Q9HCE9 1232 aaPredicted RBP21.01■□□□□ 0.95
LTBR-201ENST00000228918 COG6Q9Y2V7 657 aa21.01■□□□□ 0.95
LTBR-201ENST00000228918 RARSP54136 660 aaKnown RBP21.01■□□□□ 0.95
LTBR-201ENST00000228918 NCBP3Q53F19 620 aaKnown RBP20.99■□□□□ 0.95
LTBR-201ENST00000228918 NUTM2DQ5VT03 806 aaPredicted RBP20.99■□□□□ 0.95
LTBR-201ENST00000228918 ZFYVE9O95405 1425 aa20.99■□□□□ 0.95
LTBR-201ENST00000228918 RICTORQ6R327 1708 aa20.99■□□□□ 0.95
LTBR-201ENST00000228918 RAPGEF3O95398 923 aa20.97■□□□□ 0.95
LTBR-201ENST00000228918 MYO5BQ9ULV0 1848 aa20.97■□□□□ 0.95
LTBR-201ENST00000228918 SLC4A3P48751 1232 aa20.97■□□□□ 0.95
LTBR-201ENST00000228918 FRAT1Q92837 279 aaPredicted RBP20.97■□□□□ 0.95
LTBR-201ENST00000228918 MAPK8IP3Q9UPT6 1336 aa20.96■□□□□ 0.95
LTBR-201ENST00000228918 AAMPQ13685 434 aa20.95■□□□□ 0.95
LTBR-201ENST00000228918 CABP2Q9NPB3 220 aa20.95■□□□□ 0.95
LTBR-201ENST00000228918 DAXXQ9UER7 740 aaPredicted RBP20.95■□□□□ 0.94
LTBR-201ENST00000228918 ABCC11Q96J66 1382 aa20.95■□□□□ 0.94
LTBR-201ENST00000228918 A0A1W2PP64 1363 aa20.94■□□□□ 0.94
LTBR-201ENST00000228918 ANKRD26Q9UPS8 1709 aa20.94■□□□□ 0.94
LTBR-201ENST00000228918 PREX1Q8TCU6 1659 aa20.93■□□□□ 0.94
LTBR-201ENST00000228918 IDI1Q13907 227 aa20.93■□□□□ 0.94
LTBR-201ENST00000228918 TMEM131LA2VDJ0 1609 aa20.92■□□□□ 0.94
LTBR-201ENST00000228918 RLBP1P12271 317 aa20.92■□□□□ 0.94
LTBR-201ENST00000228918 MYH16Q9H6N6 1097 aa20.92■□□□□ 0.94
LTBR-201ENST00000228918 CLTCQ00610 1675 aaKnown RBP20.92■□□□□ 0.94
LTBR-201ENST00000228918 U2AF1L5P0DN76 240 aaPredicted RBP20.92■□□□□ 0.94
LTBR-201ENST00000228918 U2AF1Q01081 240 aaKnown RBP eCLIP20.92■□□□□ 0.94
LTBR-201ENST00000228918 COL3A1P02461 1466 aaPredicted RBP20.91■□□□□ 0.94
LTBR-201ENST00000228918 PTPRMP28827 1452 aa20.91■□□□□ 0.94
LTBR-201ENST00000228918 PMFBP1Q8TBY8 1022 aa20.91■□□□□ 0.94
LTBR-201ENST00000228918 TNNQ9UQP3 1299 aa20.91■□□□□ 0.94
LTBR-201ENST00000228918 SLC52A1Q9NWF4 448 aa20.9■□□□□ 0.94
LTBR-201ENST00000228918 NFKBIBQ15653 356 aa20.9■□□□□ 0.94
LTBR-201ENST00000228918 USP19O94966 1318 aa20.9■□□□□ 0.94
LTBR-201ENST00000228918 SAFB2Q14151 953 aaKnown RBP eCLIP20.89■□□□□ 0.94
LTBR-201ENST00000228918 BCL2L13Q9BXK5 485 aa20.89■□□□□ 0.94
LTBR-201ENST00000228918 YEATS2Q9ULM3 1422 aa20.89■□□□□ 0.93
LTBR-201ENST00000228918 PCDHB15Q9Y5E8 787 aa20.88■□□□□ 0.93
LTBR-201ENST00000228918 ZMYM3Q14202 1370 aa20.88■□□□□ 0.93
LTBR-201ENST00000228918 MED14O60244 1454 aa20.87■□□□□ 0.93
LTBR-201ENST00000228918 ATAD2Q6PL18 1390 aa20.87■□□□□ 0.93
LTBR-201ENST00000228918 NLRP1Q9C000 1473 aa20.87■□□□□ 0.93
LTBR-201ENST00000228918 CD163L1Q9NR16 1453 aa20.86■□□□□ 0.93
LTBR-201ENST00000228918 SRPK2P78362 688 aaKnown RBP20.86■□□□□ 0.93
LTBR-201ENST00000228918 STK26Q9P289 416 aa20.86■□□□□ 0.93
LTBR-201ENST00000228918 CT47B1P0C2W7 299 aaPredicted RBP20.85■□□□□ 0.93
LTBR-201ENST00000228918 IL27Q8NEV9 243 aa20.85■□□□□ 0.93
LTBR-201ENST00000228918 PLEKHF1Q96S99 279 aa20.85■□□□□ 0.93
LTBR-201ENST00000228918 GGNBP2Q9H3C7 697 aa20.84■□□□□ 0.93
LTBR-201ENST00000228918 YTHDC2Q9H6S0 1430 aaKnown RBP20.84■□□□□ 0.93
LTBR-201ENST00000228918 SEC24BO95487 1268 aa20.83■□□□□ 0.92
LTBR-201ENST00000228918 MVPQ14764 893 aaKnown RBP20.83■□□□□ 0.92
LTBR-201ENST00000228918 KIF20BQ96Q89 1820 aa20.82■□□□□ 0.92
LTBR-201ENST00000228918 ZKSCAN2Q63HK3 967 aa20.81■□□□□ 0.92
LTBR-201ENST00000228918 TERF2IPQ9NYB0 399 aa20.81■□□□□ 0.92
LTBR-201ENST00000228918 TMPOP42166 694 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms