RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 PPLO60437 1756 aa17.66■□□□□ 0.42
FRG1-201ENST00000226798 C8orf37Q96NL8 207 aa17.65■□□□□ 0.42
FRG1-201ENST00000226798 COL22A1Q8NFW1 1626 aaPredicted RBP17.65■□□□□ 0.42
FRG1-201ENST00000226798 ROBO2Q9HCK4 1378 aa17.65■□□□□ 0.42
FRG1-201ENST00000226798 RRBP1Q9P2E9 1410 aaKnown RBP17.64■□□□□ 0.42
FRG1-201ENST00000226798 RBM6P78332 1123 aaKnown RBP17.63■□□□□ 0.41
FRG1-201ENST00000226798 SOS2Q07890 1332 aaPredicted RBP17.62■□□□□ 0.41
FRG1-201ENST00000226798 QTRT2Q9H974 415 aaKnown RBP17.61■□□□□ 0.41
FRG1-201ENST00000226798 CDC42BPGQ6DT37 1551 aa17.61■□□□□ 0.41
FRG1-201ENST00000226798 PPARGC1BQ86YN6 1023 aaKnown RBP17.6■□□□□ 0.41
FRG1-201ENST00000226798 HFM1A2PYH4 1435 aa17.6■□□□□ 0.41
FRG1-201ENST00000226798 MARF1Q9Y4F3 1742 aaKnown RBP17.59■□□□□ 0.41
FRG1-201ENST00000226798 VGFO15240 615 aaPredicted RBP17.58■□□□□ 0.4
FRG1-201ENST00000226798 ORAI2Q96SN7 254 aa17.58■□□□□ 0.4
FRG1-201ENST00000226798 ADAMTS2O95450 1211 aa17.57■□□□□ 0.4
FRG1-201ENST00000226798 NGLY1Q96IV0 654 aa17.57■□□□□ 0.4
FRG1-201ENST00000226798 MYOM2P54296 1465 aa17.56■□□□□ 0.4
FRG1-201ENST00000226798 RPGRIP1LQ68CZ1 1315 aa17.56■□□□□ 0.4
FRG1-201ENST00000226798 PXDNQ92626 1479 aa17.56■□□□□ 0.4
FRG1-201ENST00000226798 IFT172Q9UG01 1749 aa17.55■□□□□ 0.4
FRG1-201ENST00000226798 ATRNO75882 1429 aa17.55■□□□□ 0.4
FRG1-201ENST00000226798 FNBP4Q8N3X1 1017 aaPredicted RBP17.54■□□□□ 0.4
FRG1-201ENST00000226798 ATAD2Q6PL18 1390 aa17.53■□□□□ 0.4
FRG1-201ENST00000226798 KNDC1Q76NI1 1749 aa17.53■□□□□ 0.4
FRG1-201ENST00000226798 USP21Q9UK80 565 aa17.53■□□□□ 0.4
FRG1-201ENST00000226798 TECPR2O15040 1411 aa17.52■□□□□ 0.4
FRG1-201ENST00000226798 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.52■□□□□ 0.39
FRG1-201ENST00000226798 TRPC5Q9UL62 973 aaPredicted RBP17.51■□□□□ 0.39
FRG1-201ENST00000226798 NPHP3Q7Z494 1330 aa17.5■□□□□ 0.39
FRG1-201ENST00000226798 BCL9LQ86UU0 1499 aa17.5■□□□□ 0.39
FRG1-201ENST00000226798 SLC4A1APQ9BWU0 796 aaKnown RBP17.49■□□□□ 0.39
FRG1-201ENST00000226798 FMN2Q9NZ56 1722 aa17.49■□□□□ 0.39
FRG1-201ENST00000226798 SPATA31E1Q6ZUB1 1445 aa17.47■□□□□ 0.39
FRG1-201ENST00000226798 KIF1AQ12756 1690 aa17.47■□□□□ 0.39
FRG1-201ENST00000226798 ESCO1Q5FWF5 840 aa17.46■□□□□ 0.39
FRG1-201ENST00000226798 ADGRF5Q8IZF2 1346 aa17.46■□□□□ 0.38
FRG1-201ENST00000226798 LRPPRCP42704 1394 aaKnown RBP17.45■□□□□ 0.38
FRG1-201ENST00000226798 CCDC144AA2RUR9 1427 aa17.44■□□□□ 0.38
FRG1-201ENST00000226798 PIK3C2GO75747 1445 aa17.44■□□□□ 0.38
FRG1-201ENST00000226798 GLI3P10071 1580 aa17.44■□□□□ 0.38
FRG1-201ENST00000226798 USP32Q8NFA0 1604 aa17.43■□□□□ 0.38
FRG1-201ENST00000226798 ABCC11Q96J66 1382 aa17.43■□□□□ 0.38
FRG1-201ENST00000226798 FOXO3O43524 673 aa17.43■□□□□ 0.38
FRG1-201ENST00000226798 SLIT2O94813 1529 aa17.42■□□□□ 0.38
FRG1-201ENST00000226798 ANKRD30BQ9BXX2 1392 aa17.42■□□□□ 0.38
FRG1-201ENST00000226798 XPCQ01831 940 aaPredicted RBP17.42■□□□□ 0.38
FRG1-201ENST00000226798 PLEKHH1Q9ULM0 1364 aa17.41■□□□□ 0.38
FRG1-201ENST00000226798 RGPD8O14715 1765 aaPredicted RBP17.41■□□□□ 0.38
FRG1-201ENST00000226798 WAPLQ7Z5K2 1190 aa17.41■□□□□ 0.38
FRG1-201ENST00000226798 ABCA3Q99758 1704 aa17.41■□□□□ 0.38
FRG1-201ENST00000226798 BRWD3Q6RI45 1802 aa17.4■□□□□ 0.38
FRG1-201ENST00000226798 RALGAPBQ86X10 1494 aa17.39■□□□□ 0.37
FRG1-201ENST00000226798 GJD4Q96KN9 370 aaPredicted RBP17.39■□□□□ 0.37
FRG1-201ENST00000226798 STK26Q9P289 416 aa17.39■□□□□ 0.37
FRG1-201ENST00000226798 YTHDC2Q9H6S0 1430 aaKnown RBP17.38■□□□□ 0.37
FRG1-201ENST00000226798 SPATA31A3Q5VYP0 1347 aa17.38■□□□□ 0.37
FRG1-201ENST00000226798 PLCH1Q4KWH8 1693 aa17.38■□□□□ 0.37
FRG1-201ENST00000226798 NWD2Q9ULI1 1742 aa17.38■□□□□ 0.37
FRG1-201ENST00000226798 NUTM2FA1L443 756 aa17.37■□□□□ 0.37
FRG1-201ENST00000226798 CCDC125Q86Z20 511 aa17.37■□□□□ 0.37
FRG1-201ENST00000226798 RGL3Q3MIN7 710 aa17.36■□□□□ 0.37
FRG1-201ENST00000226798 TMEM132EQ6IEE7 984 aa17.36■□□□□ 0.37
FRG1-201ENST00000226798 ZRANB1Q9UGI0 708 aa17.36■□□□□ 0.37
FRG1-201ENST00000226798 NRXN1Q9ULB1 1477 aa17.36■□□□□ 0.37
FRG1-201ENST00000226798 UNC5CLQ8IV45 518 aa17.35■□□□□ 0.37
FRG1-201ENST00000226798 TNS3Q68CZ2 1445 aa17.35■□□□□ 0.37
FRG1-201ENST00000226798 BLMP54132 1417 aaPredicted RBP17.33■□□□□ 0.36
FRG1-201ENST00000226798 SIRT1Q96EB6 747 aa17.33■□□□□ 0.36
FRG1-201ENST00000226798 MPHOSPH9Q99550 1183 aa17.33■□□□□ 0.36
FRG1-201ENST00000226798 KRT28Q7Z3Y7 464 aa17.31■□□□□ 0.36
FRG1-201ENST00000226798 ADGRB2O60241 1585 aa17.31■□□□□ 0.36
FRG1-201ENST00000226798 NRAPQ86VF7 1730 aa17.3■□□□□ 0.36
FRG1-201ENST00000226798 DLC1Q96QB1 1528 aa17.3■□□□□ 0.36
FRG1-201ENST00000226798 TRPM3Q9HCF6 1732 aaPredicted RBP17.3■□□□□ 0.36
FRG1-201ENST00000226798 SBNO1A3KN83 1393 aa17.29■□□□□ 0.36
FRG1-201ENST00000226798 C14orf93Q9H972 538 aaKnown RBP17.29■□□□□ 0.36
FRG1-201ENST00000226798 PHF8Q9UPP1 1060 aa17.29■□□□□ 0.36
FRG1-201ENST00000226798 U3KPZ7 1027 aaPredicted RBP17.29■□□□□ 0.36
FRG1-201ENST00000226798 ALS2Q96Q42 1657 aa17.27■□□□□ 0.36
FRG1-201ENST00000226798 VPS72Q15906 364 aa17.27■□□□□ 0.36
FRG1-201ENST00000226798 ANKARQ7Z5J8 1434 aa17.27■□□□□ 0.35
FRG1-201ENST00000226798 ARHGEF10O15013 1369 aa17.27■□□□□ 0.35
FRG1-201ENST00000226798 CABLES1Q8TDN4 633 aa17.26■□□□□ 0.35
FRG1-201ENST00000226798 ADGRB1O14514 1584 aa17.26■□□□□ 0.35
FRG1-201ENST00000226798 DHX57Q6P158 1386 aaKnown RBP17.26■□□□□ 0.35
FRG1-201ENST00000226798 LRP5O75197 1615 aa17.25■□□□□ 0.35
FRG1-201ENST00000226798 CRYBG1Q9Y4K1 1723 aa17.25■□□□□ 0.35
FRG1-201ENST00000226798 ONECUT3O60422 494 aaPredicted RBP17.25■□□□□ 0.35
FRG1-201ENST00000226798 PSME1Q06323 249 aa17.25■□□□□ 0.35
FRG1-201ENST00000226798 SEPT12Q8IYM1 358 aa17.25■□□□□ 0.35
FRG1-201ENST00000226798 CFAP70Q5T0N1 1121 aa17.24■□□□□ 0.35
FRG1-201ENST00000226798 COL14A1Q05707 1796 aaKnown RBP17.23■□□□□ 0.35
FRG1-201ENST00000226798 HAP1P54257 671 aaPredicted RBP17.23■□□□□ 0.35
FRG1-201ENST00000226798 DEFB132Q7Z7B7 95 aa17.23■□□□□ 0.35
FRG1-201ENST00000226798 PRAM1Q96QH2 718 aa17.23■□□□□ 0.35
FRG1-201ENST00000226798 SAFB2Q14151 953 aaKnown RBP eCLIP17.2■□□□□ 0.34
FRG1-201ENST00000226798 TULP4Q9NRJ4 1543 aa17.2■□□□□ 0.34
FRG1-201ENST00000226798 ACIN1Q9UKV3 1341 aaKnown RBP17.2■□□□□ 0.34
FRG1-201ENST00000226798 RGPD1P0DJD0 1748 aa17.19■□□□□ 0.34
FRG1-201ENST00000226798 FAM83GA6ND36 823 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms