RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 SLC12A5Q9H2X9 1139 aa28.73■■■□□ 2.19
SMARCD2-201ENST00000225742 CGNL1Q0VF96 1302 aa28.73■■■□□ 2.19
SMARCD2-201ENST00000225742 PREX1Q8TCU6 1659 aa28.72■■■□□ 2.19
SMARCD2-201ENST00000225742 TULP4Q9NRJ4 1543 aa28.72■■■□□ 2.19
SMARCD2-201ENST00000225742 ANKRD36BQ8N2N9 1353 aa28.72■■■□□ 2.19
SMARCD2-201ENST00000225742 NINLQ9Y2I6 1382 aa28.72■■■□□ 2.19
SMARCD2-201ENST00000225742 PDE4AP27815 886 aa28.71■■■□□ 2.19
SMARCD2-201ENST00000225742 C20orf194Q5TEA3 1177 aa28.71■■■□□ 2.19
SMARCD2-201ENST00000225742 CENPQQ7L2Z9 268 aaPredicted RBP28.7■■■□□ 2.18
SMARCD2-201ENST00000225742 BACH2Q9BYV9 841 aa28.7■■■□□ 2.18
SMARCD2-201ENST00000225742 KDM2BQ8NHM5 1336 aa28.7■■■□□ 2.18
SMARCD2-201ENST00000225742 NCBP3Q53F19 620 aaKnown RBP28.69■■■□□ 2.18
SMARCD2-201ENST00000225742 IDI1Q13907 227 aa28.69■■■□□ 2.18
SMARCD2-201ENST00000225742 TMEM131LA2VDJ0 1609 aa28.69■■■□□ 2.18
SMARCD2-201ENST00000225742 YEATS2Q9ULM3 1422 aa28.68■■■□□ 2.18
SMARCD2-201ENST00000225742 RUNDC1Q96C34 613 aa28.66■■■□□ 2.18
SMARCD2-201ENST00000225742 CFAP53Q96M91 514 aa28.66■■■□□ 2.18
SMARCD2-201ENST00000225742 IQSEC2Q5JU85 1478 aa28.64■■■□□ 2.17
SMARCD2-201ENST00000225742 SPINK5Q9NQ38 1064 aaPredicted RBP28.64■■■□□ 2.17
SMARCD2-201ENST00000225742 MYO5BQ9ULV0 1848 aa28.63■■■□□ 2.17
SMARCD2-201ENST00000225742 WWC1Q8IX03 1113 aa28.62■■■□□ 2.17
SMARCD2-201ENST00000225742 ZBTB47Q9UFB7 747 aaPredicted RBP28.62■■■□□ 2.17
SMARCD2-201ENST00000225742 REREQ9P2R6 1566 aa28.62■■■□□ 2.17
SMARCD2-201ENST00000225742 CLTCQ00610 1675 aaKnown RBP28.59■■■□□ 2.17
SMARCD2-201ENST00000225742 CCDC27Q2M243 656 aa28.59■■■□□ 2.17
SMARCD2-201ENST00000225742 PHF23Q9BUL5 403 aaPredicted RBP28.59■■■□□ 2.17
SMARCD2-201ENST00000225742 PPP6R1Q9UPN7 881 aa28.59■■■□□ 2.17
SMARCD2-201ENST00000225742 WDR63Q8IWG1 891 aa28.58■■■□□ 2.17
SMARCD2-201ENST00000225742 PDE3AQ14432 1141 aa28.57■■■□□ 2.16
SMARCD2-201ENST00000225742 MTHFSP49914 203 aa28.57■■■□□ 2.16
SMARCD2-201ENST00000225742 ATAD2Q6PL18 1390 aa28.56■■■□□ 2.16
SMARCD2-201ENST00000225742 PAK3O75914 559 aaPredicted RBP28.56■■■□□ 2.16
SMARCD2-201ENST00000225742 PTPRMP28827 1452 aa28.56■■■□□ 2.16
SMARCD2-201ENST00000225742 AGLP35573 1532 aa28.56■■■□□ 2.16
SMARCD2-201ENST00000225742 NUTM2DQ5VT03 806 aaPredicted RBP28.55■■■□□ 2.16
SMARCD2-201ENST00000225742 ABCC11Q96J66 1382 aa28.55■■■□□ 2.16
SMARCD2-201ENST00000225742 MED14O60244 1454 aa28.53■■■□□ 2.16
SMARCD2-201ENST00000225742 DMRT2Q9Y5R5 561 aa28.53■■■□□ 2.16
SMARCD2-201ENST00000225742 ANKRD26Q9UPS8 1709 aa28.52■■■□□ 2.16
SMARCD2-201ENST00000225742 TNNT2P45379 298 aaPredicted RBP28.52■■■□□ 2.16
SMARCD2-201ENST00000225742 TCP11L2Q8N4U5 519 aa28.52■■■□□ 2.16
SMARCD2-201ENST00000225742 CABP2Q9NPB3 220 aa28.52■■■□□ 2.16
SMARCD2-201ENST00000225742 YTHDC2Q9H6S0 1430 aaKnown RBP28.52■■■□□ 2.16
SMARCD2-201ENST00000225742 BCAR3O75815 825 aa28.5■■■□□ 2.15
SMARCD2-201ENST00000225742 DIP2BQ9P265 1576 aa28.5■■■□□ 2.15
SMARCD2-201ENST00000225742 AAMPQ13685 434 aa28.5■■■□□ 2.15
SMARCD2-201ENST00000225742 ADGRB2O60241 1585 aa28.49■■■□□ 2.15
SMARCD2-201ENST00000225742 TERF2IPQ9NYB0 399 aa28.48■■■□□ 2.15
SMARCD2-201ENST00000225742 ALKQ9UM73 1620 aa28.48■■■□□ 2.15
SMARCD2-201ENST00000225742 A0A1W2PP64 1363 aa28.48■■■□□ 2.15
SMARCD2-201ENST00000225742 SRPK2P78362 688 aaKnown RBP28.46■■■□□ 2.15
SMARCD2-201ENST00000225742 DDRGK1Q96HY6 314 aa28.45■■■□□ 2.14
SMARCD2-201ENST00000225742 STK26Q9P289 416 aa28.45■■■□□ 2.14
SMARCD2-201ENST00000225742 DLC1Q96QB1 1528 aa28.44■■■□□ 2.14
SMARCD2-201ENST00000225742 NPM2Q86SE8 214 aaKnown RBP28.43■■■□□ 2.14
SMARCD2-201ENST00000225742 CYB5RLQ6IPT4 315 aa28.43■■■□□ 2.14
SMARCD2-201ENST00000225742 MYH16Q9H6N6 1097 aa28.43■■■□□ 2.14
SMARCD2-201ENST00000225742 POGKQ9P215 609 aa28.43■■■□□ 2.14
SMARCD2-201ENST00000225742 FAM69CQ0P6D2 419 aa28.41■■■□□ 2.14
SMARCD2-201ENST00000225742 PRAM1Q96QH2 718 aa28.41■■■□□ 2.14
SMARCD2-201ENST00000225742 SPATA31D1Q6ZQQ2 1576 aa28.41■■■□□ 2.14
SMARCD2-201ENST00000225742 FAM161AQ3B820 660 aa28.41■■■□□ 2.14
SMARCD2-201ENST00000225742 RIMBP3CA6NJZ7 1639 aa28.41■■■□□ 2.14
SMARCD2-201ENST00000225742 RIMBP3BA6NNM3 1639 aa28.41■■■□□ 2.14
SMARCD2-201ENST00000225742 RIMBP3Q9UFD9 1639 aa28.41■■■□□ 2.14
SMARCD2-201ENST00000225742 CANXP27824 592 aaKnown RBP28.4■■■□□ 2.14
SMARCD2-201ENST00000225742 RARSP54136 660 aaKnown RBP28.4■■■□□ 2.14
SMARCD2-201ENST00000225742 SAFB2Q14151 953 aaKnown RBP eCLIP28.4■■■□□ 2.14
SMARCD2-201ENST00000225742 COL3A1P02461 1466 aaPredicted RBP28.4■■■□□ 2.14
SMARCD2-201ENST00000225742 CD163L1Q9NR16 1453 aa28.4■■■□□ 2.14
SMARCD2-201ENST00000225742 U2AF1L5P0DN76 240 aaPredicted RBP28.39■■■□□ 2.14
SMARCD2-201ENST00000225742 U2AF1Q01081 240 aaKnown RBP eCLIP28.39■■■□□ 2.14
SMARCD2-201ENST00000225742 RRP7AQ9Y3A4 280 aaKnown RBP28.39■■■□□ 2.14
SMARCD2-201ENST00000225742 ARHGEF40Q8TER5 1519 aa28.39■■■□□ 2.13
SMARCD2-201ENST00000225742 CT47B1P0C2W7 299 aaPredicted RBP28.39■■■□□ 2.13
SMARCD2-201ENST00000225742 FBXO31Q5XUX0 539 aaPredicted RBP28.39■■■□□ 2.13
SMARCD2-201ENST00000225742 NEUROD2Q15784 382 aa28.38■■■□□ 2.13
SMARCD2-201ENST00000225742 HDGFL2Q7Z4V5 671 aaPredicted RBP28.37■■■□□ 2.13
SMARCD2-201ENST00000225742 NLRP1Q9C000 1473 aa28.37■■■□□ 2.13
SMARCD2-201ENST00000225742 CLUAP1Q96AJ1 413 aa28.36■■■□□ 2.13
SMARCD2-201ENST00000225742 STAG3Q9UJ98 1225 aa28.36■■■□□ 2.13
SMARCD2-201ENST00000225742 MINK1Q8N4C8 1332 aaPredicted RBP28.36■■■□□ 2.13
SMARCD2-201ENST00000225742 KIF20BQ96Q89 1820 aa28.36■■■□□ 2.13
SMARCD2-201ENST00000225742 A2ML1A8K2U0 1454 aa28.35■■■□□ 2.13
SMARCD2-201ENST00000225742 SKAP1Q86WV1 359 aa28.34■■■□□ 2.13
SMARCD2-201ENST00000225742 FYB1O15117 783 aa28.34■■■□□ 2.13
SMARCD2-201ENST00000225742 PNNQ9H307 717 aaKnown RBP28.33■■■□□ 2.13
SMARCD2-201ENST00000225742 CDK19Q9BWU1 502 aa28.32■■■□□ 2.12
SMARCD2-201ENST00000225742 TSPOAP1O95153 1857 aa28.31■■■□□ 2.12
SMARCD2-201ENST00000225742 SETD1AO15047 1707 aaKnown RBP28.31■■■□□ 2.12
SMARCD2-201ENST00000225742 C8orf34Q49A92 452 aa28.31■■■□□ 2.12
SMARCD2-201ENST00000225742 PLEKHF1Q96S99 279 aa28.31■■■□□ 2.12
SMARCD2-201ENST00000225742 GGNBP2Q9H3C7 697 aa28.31■■■□□ 2.12
SMARCD2-201ENST00000225742 ATP7BP35670 1465 aa28.3■■■□□ 2.12
SMARCD2-201ENST00000225742 RIMS2Q9UQ26 1411 aa28.3■■■□□ 2.12
SMARCD2-201ENST00000225742 PNPLA6Q8IY17 1366 aa28.3■■■□□ 2.12
SMARCD2-201ENST00000225742 IL16Q14005 1332 aa28.3■■■□□ 2.12
SMARCD2-201ENST00000225742 PANK1Q8TE04 598 aa28.29■■■□□ 2.12
SMARCD2-201ENST00000225742 MAPK8IP3Q9UPT6 1336 aa28.29■■■□□ 2.12
SMARCD2-201ENST00000225742 PMFBP1Q8TBY8 1022 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms