RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 TRAK1Q9UPV9 953 aa33.22■■■□□ 2.91
RUNDC3A-201ENST00000225441 DISP3Q9P2K9 1392 aa33.19■■■□□ 2.9
RUNDC3A-201ENST00000225441 YTHDC2Q9H6S0 1430 aaKnown RBP33.19■■■□□ 2.9
RUNDC3A-201ENST00000225441 CNGB1Q14028 1251 aaPredicted RBP33.18■■■□□ 2.9
RUNDC3A-201ENST00000225441 ARHGEF28Q8N1W1 1705 aaKnown RBP33.17■■■□□ 2.9
RUNDC3A-201ENST00000225441 CENPJQ9HC77 1338 aaPredicted RBP33.16■■■□□ 2.9
RUNDC3A-201ENST00000225441 ADAMTS13Q76LX8 1427 aa33.15■■■□□ 2.9
RUNDC3A-201ENST00000225441 KDM4FA0A1W2PPD8 638 aa33.15■■■□□ 2.9
RUNDC3A-201ENST00000225441 CCDC136Q96JN2 1154 aa33.15■■■□□ 2.9
RUNDC3A-201ENST00000225441 BLMP54132 1417 aaPredicted RBP33.14■■■□□ 2.9
RUNDC3A-201ENST00000225441 MSH5O43196 834 aa33.14■■■□□ 2.9
RUNDC3A-201ENST00000225441 CDCA8Q53HL2 280 aa33.14■■■□□ 2.9
RUNDC3A-201ENST00000225441 SBNO2Q9Y2G9 1366 aa33.14■■■□□ 2.9
RUNDC3A-201ENST00000225441 STK26Q9P289 416 aa33.13■■■□□ 2.89
RUNDC3A-201ENST00000225441 METP08581 1390 aa33.11■■■□□ 2.89
RUNDC3A-201ENST00000225441 SLC24A1O60721 1099 aa33.11■■■□□ 2.89
RUNDC3A-201ENST00000225441 QRICH2Q9H0J4 1663 aa33.1■■■□□ 2.89
RUNDC3A-201ENST00000225441 MED14O60244 1454 aa33.1■■■□□ 2.89
RUNDC3A-201ENST00000225441 PANK3Q9H999 370 aa33.09■■■□□ 2.89
RUNDC3A-201ENST00000225441 RRP1P56182 461 aaKnown RBP33.07■■■□□ 2.89
RUNDC3A-201ENST00000225441 DLC1Q96QB1 1528 aa33.07■■■□□ 2.88
RUNDC3A-201ENST00000225441 ANKLE2Q86XL3 938 aa33.06■■■□□ 2.88
RUNDC3A-201ENST00000225441 RCAN3Q9UKA8 241 aa33.05■■■□□ 2.88
RUNDC3A-201ENST00000225441 ABCC11Q96J66 1382 aa33.05■■■□□ 2.88
RUNDC3A-201ENST00000225441 DIP2AQ14689 1571 aa33.05■■■□□ 2.88
RUNDC3A-201ENST00000225441 KNDC1Q76NI1 1749 aa33.01■■■□□ 2.88
RUNDC3A-201ENST00000225441 ERICH6Q7L0X2 663 aa33.01■■■□□ 2.87
RUNDC3A-201ENST00000225441 SLC26A8Q96RN1 970 aa33.01■■■□□ 2.87
RUNDC3A-201ENST00000225441 TBX22Q9Y458 520 aa33.01■■■□□ 2.87
RUNDC3A-201ENST00000225441 NPC1L1Q9UHC9 1359 aa33■■■□□ 2.87
RUNDC3A-201ENST00000225441 PRAM1Q96QH2 718 aa33■■■□□ 2.87
RUNDC3A-201ENST00000225441 TECPR2O15040 1411 aa32.99■■■□□ 2.87
RUNDC3A-201ENST00000225441 POGKQ9P215 609 aa32.98■■■□□ 2.87
RUNDC3A-201ENST00000225441 CPS1P31327 1500 aa32.96■■■□□ 2.87
RUNDC3A-201ENST00000225441 CC2D1BQ5T0F9 858 aaKnown RBP32.95■■■□□ 2.86
RUNDC3A-201ENST00000225441 SAFB2Q14151 953 aaKnown RBP eCLIP32.94■■■□□ 2.86
RUNDC3A-201ENST00000225441 SIRT1Q96EB6 747 aa32.93■■■□□ 2.86
RUNDC3A-201ENST00000225441 KNSTRNQ9Y448 316 aa32.93■■■□□ 2.86
RUNDC3A-201ENST00000225441 TULP4Q9NRJ4 1543 aa32.92■■■□□ 2.86
RUNDC3A-201ENST00000225441 FAM135BQ49AJ0 1406 aa32.92■■■□□ 2.86
RUNDC3A-201ENST00000225441 PTPRUQ92729 1446 aa32.92■■■□□ 2.86
RUNDC3A-201ENST00000225441 NPHP4O75161 1426 aaPredicted RBP32.9■■■□□ 2.86
RUNDC3A-201ENST00000225441 PLEKHH1Q9ULM0 1364 aa32.9■■■□□ 2.86
RUNDC3A-201ENST00000225441 WAPLQ7Z5K2 1190 aa32.89■■■□□ 2.86
RUNDC3A-201ENST00000225441 EVC2Q86UK5 1308 aa32.89■■■□□ 2.86
RUNDC3A-201ENST00000225441 PIK3R4Q99570 1358 aa32.88■■■□□ 2.85
RUNDC3A-201ENST00000225441 MYOM1P52179 1685 aa32.87■■■□□ 2.85
RUNDC3A-201ENST00000225441 MINK1Q8N4C8 1332 aaPredicted RBP32.87■■■□□ 2.85
RUNDC3A-201ENST00000225441 ROBO2Q9HCK4 1378 aa32.86■■■□□ 2.85
RUNDC3A-201ENST00000225441 NCKAP5LQ9HCH0 1330 aa32.85■■■□□ 2.85
RUNDC3A-201ENST00000225441 AMER1Q5JTC6 1135 aaPredicted RBP32.85■■■□□ 2.85
RUNDC3A-201ENST00000225441 PUS7Q96PZ0 661 aaKnown RBP32.84■■■□□ 2.85
RUNDC3A-201ENST00000225441 TCERG1O14776 1098 aaKnown RBP32.84■■■□□ 2.85
RUNDC3A-201ENST00000225441 AMOTL2Q9Y2J4 779 aa32.84■■■□□ 2.85
RUNDC3A-201ENST00000225441 XRN1Q8IZH2 1706 aaKnown RBP32.83■■■□□ 2.85
RUNDC3A-201ENST00000225441 PPP2R1AP30153 589 aa32.82■■■□□ 2.84
RUNDC3A-201ENST00000225441 LMTK3Q96Q04 1460 aa32.82■■■□□ 2.84
RUNDC3A-201ENST00000225441 PTCH1Q13635 1447 aa32.81■■■□□ 2.84
RUNDC3A-201ENST00000225441 EXOC6Q8TAG9 804 aa32.79■■■□□ 2.84
RUNDC3A-201ENST00000225441 MS4A1P11836 297 aa32.77■■■□□ 2.84
RUNDC3A-201ENST00000225441 ANP32AP39687 249 aaKnown RBP32.77■■■□□ 2.84
RUNDC3A-201ENST00000225441 WDR43Q15061 677 aaKnown RBP eCLIP32.76■■■□□ 2.83
RUNDC3A-201ENST00000225441 CABP2Q9NPB3 220 aa32.76■■■□□ 2.83
RUNDC3A-201ENST00000225441 HSPA2P54652 639 aa32.75■■■□□ 2.83
RUNDC3A-201ENST00000225441 CHD2O14647 1828 aaKnown RBP32.75■■■□□ 2.83
RUNDC3A-201ENST00000225441 CDCA7LQ96GN5 454 aa32.74■■■□□ 2.83
RUNDC3A-201ENST00000225441 SRPK2P78362 688 aaKnown RBP32.74■■■□□ 2.83
RUNDC3A-201ENST00000225441 ADAMTS8Q9UP79 889 aa32.74■■■□□ 2.83
RUNDC3A-201ENST00000225441 NOP58Q9Y2X3 529 aaKnown RBP32.74■■■□□ 2.83
RUNDC3A-201ENST00000225441 NGEFQ8N5V2 710 aa32.73■■■□□ 2.83
RUNDC3A-201ENST00000225441 SENP3-EIF4A1A0A087X0R7 540 aa32.72■■■□□ 2.83
RUNDC3A-201ENST00000225441 CDK19Q9BWU1 502 aa32.72■■■□□ 2.83
RUNDC3A-201ENST00000225441 SALL2Q9Y467 1007 aaPredicted RBP32.72■■■□□ 2.83
RUNDC3A-201ENST00000225441 KCNA6P17658 529 aa32.71■■■□□ 2.83
RUNDC3A-201ENST00000225441 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.71■■■□□ 2.83
RUNDC3A-201ENST00000225441 ADGRB2O60241 1585 aa32.71■■■□□ 2.83
RUNDC3A-201ENST00000225441 ATAD2Q6PL18 1390 aa32.7■■■□□ 2.83
RUNDC3A-201ENST00000225441 ZNF521Q96K83 1311 aa32.69■■■□□ 2.82
RUNDC3A-201ENST00000225441 IPO9Q96P70 1041 aaKnown RBP32.68■■■□□ 2.82
RUNDC3A-201ENST00000225441 WASLO00401 505 aaPredicted RBP32.67■■■□□ 2.82
RUNDC3A-201ENST00000225441 SLC12A5Q9H2X9 1139 aa32.66■■■□□ 2.82
RUNDC3A-201ENST00000225441 NINLQ9Y2I6 1382 aa32.66■■■□□ 2.82
RUNDC3A-201ENST00000225441 NWD1Q149M9 1564 aa32.63■■■□□ 2.81
RUNDC3A-201ENST00000225441 GOLGA2Q08379 1002 aa32.61■■■□□ 2.81
RUNDC3A-201ENST00000225441 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.6■■■□□ 2.81
RUNDC3A-201ENST00000225441 DUSP27Q5VZP5 1158 aa32.59■■■□□ 2.81
RUNDC3A-201ENST00000225441 STRCQ7RTU9 1775 aa32.59■■■□□ 2.81
RUNDC3A-201ENST00000225441 ANKRD36BQ8N2N9 1353 aa32.59■■■□□ 2.81
RUNDC3A-201ENST00000225441 CARD14Q9BXL6 1004 aa32.58■■■□□ 2.81
RUNDC3A-201ENST00000225441 TRMT2AQ8IZ69 625 aaKnown RBP32.55■■■□□ 2.8
RUNDC3A-201ENST00000225441 SLFN5Q08AF3 891 aa32.53■■■□□ 2.8
RUNDC3A-201ENST00000225441 NUDT16Q96DE0 195 aaKnown RBP32.53■■■□□ 2.8
RUNDC3A-201ENST00000225441 CRBNQ96SW2 442 aa32.53■■■□□ 2.8
RUNDC3A-201ENST00000225441 ATP7BP35670 1465 aa32.53■■■□□ 2.8
RUNDC3A-201ENST00000225441 NSD3Q9BZ95 1437 aa32.52■■■□□ 2.8
RUNDC3A-201ENST00000225441 ZBTB47Q9UFB7 747 aaPredicted RBP32.52■■■□□ 2.8
RUNDC3A-201ENST00000225441 BACH2Q9BYV9 841 aa32.51■■■□□ 2.8
RUNDC3A-201ENST00000225441 CABP1Q9NZU7 370 aa32.51■■■□□ 2.8
RUNDC3A-201ENST00000225441 CD163L1Q9NR16 1453 aa32.51■■■□□ 2.8
RUNDC3A-201ENST00000225441 NKTRP30414 1462 aaKnown RBP32.51■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms