RNA–Protein interactions for RNA: ENST00000225308.12

SLC25A39-201, Transcript of solute carrier family 25 member 39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC25A39, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-201ENST00000225308 PRAM1Q96QH2 718 aa31.11■■■□□ 2.57
SLC25A39-201ENST00000225308 GPRASP1Q5JY77 1395 aa31.1■■■□□ 2.57
SLC25A39-201ENST00000225308 CDC42BPGQ6DT37 1551 aa31.08■■■□□ 2.57
SLC25A39-201ENST00000225308 CADPS2Q86UW7 1296 aa31.07■■■□□ 2.56
SLC25A39-201ENST00000225308 ATF3P18847 181 aa31.06■■■□□ 2.56
SLC25A39-201ENST00000225308 SAFB2Q14151 953 aaKnown RBP eCLIP31.06■■■□□ 2.56
SLC25A39-201ENST00000225308 POGKQ9P215 609 aa31.05■■■□□ 2.56
SLC25A39-201ENST00000225308 PIP4K2BP78356 416 aa31.04■■■□□ 2.56
SLC25A39-201ENST00000225308 ILDR1Q86SU0 546 aaPredicted RBP31.03■■■□□ 2.56
SLC25A39-201ENST00000225308 SLAIN2Q9P270 581 aa31.02■■■□□ 2.56
SLC25A39-201ENST00000225308 ADGRB2O60241 1585 aa31.02■■■□□ 2.56
SLC25A39-201ENST00000225308 MST1RQ04912 1400 aa31.02■■■□□ 2.56
SLC25A39-201ENST00000225308 ROBO1Q9Y6N7 1651 aa31.01■■■□□ 2.55
SLC25A39-201ENST00000225308 SCAF1Q9H7N4 1312 aaKnown RBP31.01■■■□□ 2.55
SLC25A39-201ENST00000225308 FMN2Q9NZ56 1722 aa30.99■■■□□ 2.55
SLC25A39-201ENST00000225308 CARD11Q9BXL7 1154 aa30.98■■■□□ 2.55
SLC25A39-201ENST00000225308 QRICH2Q9H0J4 1663 aa30.97■■■□□ 2.55
SLC25A39-201ENST00000225308 MINK1Q8N4C8 1332 aaPredicted RBP30.95■■■□□ 2.54
SLC25A39-201ENST00000225308 C1orf167Q5SNV9 1468 aa30.93■■■□□ 2.54
SLC25A39-201ENST00000225308 CENPJQ9HC77 1338 aaPredicted RBP30.93■■■□□ 2.54
SLC25A39-201ENST00000225308 HIRIP3Q9BW71 556 aaPredicted RBP30.93■■■□□ 2.54
SLC25A39-201ENST00000225308 EIF3AQ14152 1382 aaKnown RBP30.91■■■□□ 2.54
SLC25A39-201ENST00000225308 RGPD8O14715 1765 aaPredicted RBP30.9■■■□□ 2.54
SLC25A39-201ENST00000225308 BRINP3Q76B58 766 aa30.87■■■□□ 2.53
SLC25A39-201ENST00000225308 USP32Q8NFA0 1604 aa30.87■■■□□ 2.53
SLC25A39-201ENST00000225308 NUTM2FA1L443 756 aa30.86■■■□□ 2.53
SLC25A39-201ENST00000225308 WASLO00401 505 aaPredicted RBP30.84■■■□□ 2.53
SLC25A39-201ENST00000225308 TULP4Q9NRJ4 1543 aa30.83■■■□□ 2.53
SLC25A39-201ENST00000225308 HSPA1LP34931 641 aa30.82■■■□□ 2.52
SLC25A39-201ENST00000225308 ORAI2Q96SN7 254 aa30.82■■■□□ 2.52
SLC25A39-201ENST00000225308 NHSL1Q5SYE7 1610 aa30.81■■■□□ 2.52
SLC25A39-201ENST00000225308 AHDC1Q5TGY3 1603 aaPredicted RBP30.81■■■□□ 2.52
SLC25A39-201ENST00000225308 ANKARQ7Z5J8 1434 aa30.8■■■□□ 2.52
SLC25A39-201ENST00000225308 USP47Q96K76 1375 aa30.8■■■□□ 2.52
SLC25A39-201ENST00000225308 SBNO2Q9Y2G9 1366 aa30.8■■■□□ 2.52
SLC25A39-201ENST00000225308 PHLPP1O60346 1717 aa30.79■■■□□ 2.52
SLC25A39-201ENST00000225308 ATP7BP35670 1465 aa30.78■■■□□ 2.52
SLC25A39-201ENST00000225308 PRR36Q9H6K5 1346 aa30.77■■■□□ 2.52
SLC25A39-201ENST00000225308 ESCO1Q5FWF5 840 aa30.76■■■□□ 2.52
SLC25A39-201ENST00000225308 CDK19Q9BWU1 502 aa30.76■■■□□ 2.52
SLC25A39-201ENST00000225308 KIF1AQ12756 1690 aa30.75■■■□□ 2.51
SLC25A39-201ENST00000225308 COL16A1Q07092 1604 aaPredicted RBP30.75■■■□□ 2.51
SLC25A39-201ENST00000225308 ITSN1Q15811 1721 aa30.75■■■□□ 2.51
SLC25A39-201ENST00000225308 TOPAZ1Q8N9V7 1692 aa30.73■■■□□ 2.51
SLC25A39-201ENST00000225308 ST20-MTHFSA0A0A6YYL1 179 aa30.73■■■□□ 2.51
SLC25A39-201ENST00000225308 DDX17Q92841 729 aaKnown RBP30.72■■■□□ 2.51
SLC25A39-201ENST00000225308 TESK2Q96S53 571 aa30.7■■■□□ 2.51
SLC25A39-201ENST00000225308 EVC2Q86UK5 1308 aa30.69■■■□□ 2.5
SLC25A39-201ENST00000225308 NUDT16Q96DE0 195 aaKnown RBP30.69■■■□□ 2.5
SLC25A39-201ENST00000225308 SRPK2P78362 688 aaKnown RBP30.68■■■□□ 2.5
SLC25A39-201ENST00000225308 CABP2Q9NPB3 220 aa30.68■■■□□ 2.5
SLC25A39-201ENST00000225308 PHF8Q9UPP1 1060 aa30.68■■■□□ 2.5
SLC25A39-201ENST00000225308 FOXO3O43524 673 aa30.65■■■□□ 2.5
SLC25A39-201ENST00000225308 NPHP3Q7Z494 1330 aa30.64■■■□□ 2.5
SLC25A39-201ENST00000225308 PXDNQ92626 1479 aa30.64■■■□□ 2.49
SLC25A39-201ENST00000225308 PMFBP1Q8TBY8 1022 aa30.62■■■□□ 2.49
SLC25A39-201ENST00000225308 CCDC61Q9Y6R9 512 aa30.62■■■□□ 2.49
SLC25A39-201ENST00000225308 SOS2Q07890 1332 aaPredicted RBP30.62■■■□□ 2.49
SLC25A39-201ENST00000225308 PPIP5K1Q6PFW1 1433 aa30.59■■■□□ 2.49
SLC25A39-201ENST00000225308 EIF4G2P78344 907 aaKnown RBP eCLIP30.58■■■□□ 2.49
SLC25A39-201ENST00000225308 XPCQ01831 940 aaPredicted RBP30.58■■■□□ 2.49
SLC25A39-201ENST00000225308 SHPRHQ149N8 1683 aa30.57■■■□□ 2.48
SLC25A39-201ENST00000225308 DISP3Q9P2K9 1392 aa30.56■■■□□ 2.48
SLC25A39-201ENST00000225308 SLC24A1O60721 1099 aa30.55■■■□□ 2.48
SLC25A39-201ENST00000225308 HSPA5P11021 654 aaKnown RBP30.55■■■□□ 2.48
SLC25A39-201ENST00000225308 POLR3AO14802 1390 aaPredicted RBP30.55■■■□□ 2.48
SLC25A39-201ENST00000225308 ATAD2Q6PL18 1390 aa30.55■■■□□ 2.48
SLC25A39-201ENST00000225308 PLEKHG3A1L390 1219 aa30.55■■■□□ 2.48
SLC25A39-201ENST00000225308 LRRC59Q96AG4 307 aaKnown RBP30.54■■■□□ 2.48
SLC25A39-201ENST00000225308 JCADQ9P266 1359 aa30.54■■■□□ 2.48
SLC25A39-201ENST00000225308 TRPM3Q9HCF6 1732 aaPredicted RBP30.53■■■□□ 2.48
SLC25A39-201ENST00000225308 NGDNQ8NEJ9 315 aaKnown RBP30.52■■■□□ 2.48
SLC25A39-201ENST00000225308 KRT28Q7Z3Y7 464 aa30.51■■■□□ 2.48
SLC25A39-201ENST00000225308 CABP1Q9NZU7 370 aa30.51■■■□□ 2.48
SLC25A39-201ENST00000225308 ACEP12821 1306 aa30.51■■■□□ 2.47
SLC25A39-201ENST00000225308 TMF1P82094 1093 aa30.51■■■□□ 2.47
SLC25A39-201ENST00000225308 PSME1Q06323 249 aa30.5■■■□□ 2.47
SLC25A39-201ENST00000225308 PUS7Q96PZ0 661 aaKnown RBP30.5■■■□□ 2.47
SLC25A39-201ENST00000225308 PNPLA6Q8IY17 1366 aa30.48■■■□□ 2.47
SLC25A39-201ENST00000225308 AKAP12Q02952 1782 aa30.47■■■□□ 2.47
SLC25A39-201ENST00000225308 SBNO1A3KN83 1393 aa30.46■■■□□ 2.47
SLC25A39-201ENST00000225308 TNS3Q68CZ2 1445 aa30.45■■■□□ 2.47
SLC25A39-201ENST00000225308 SPATA31A3Q5VYP0 1347 aa30.45■■■□□ 2.46
SLC25A39-201ENST00000225308 ALS2Q96Q42 1657 aa30.45■■■□□ 2.46
SLC25A39-201ENST00000225308 COL22A1Q8NFW1 1626 aaPredicted RBP30.44■■■□□ 2.46
SLC25A39-201ENST00000225308 CD163L1Q9NR16 1453 aa30.42■■■□□ 2.46
SLC25A39-201ENST00000225308 CPSF1Q10570 1443 aaKnown RBP30.41■■■□□ 2.46
SLC25A39-201ENST00000225308 USP6P35125 1406 aa30.4■■■□□ 2.46
SLC25A39-201ENST00000225308 MON2Q7Z3U7 1717 aa30.4■■■□□ 2.46
SLC25A39-201ENST00000225308 MYOM1P52179 1685 aa30.4■■■□□ 2.46
SLC25A39-201ENST00000225308 SPATA31A6Q5VVP1 1343 aa30.39■■■□□ 2.46
SLC25A39-201ENST00000225308 CDCA8Q53HL2 280 aa30.39■■■□□ 2.46
SLC25A39-201ENST00000225308 SLC12A5Q9H2X9 1139 aa30.39■■■□□ 2.46
SLC25A39-201ENST00000225308 MED1Q15648 1581 aaPredicted RBP30.39■■■□□ 2.45
SLC25A39-201ENST00000225308 TMC1Q8TDI8 760 aa30.38■■■□□ 2.45
SLC25A39-201ENST00000225308 NINLQ9Y2I6 1382 aa30.38■■■□□ 2.45
SLC25A39-201ENST00000225308 LRP6O75581 1613 aa30.37■■■□□ 2.45
SLC25A39-201ENST00000225308 NRKQ7Z2Y5 1582 aa30.37■■■□□ 2.45
SLC25A39-201ENST00000225308 SSH2Q76I76 1423 aa30.36■■■□□ 2.45
SLC25A39-201ENST00000225308 ARHGEF10O15013 1369 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms