RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 TRAK1Q9UPV9 953 aa33.65■■■□□ 2.98
HOMER3-201ENST00000221222 ROBO1Q9Y6N7 1651 aa33.65■■■□□ 2.98
HOMER3-201ENST00000221222 MSH6P52701 1360 aa33.65■■■□□ 2.98
HOMER3-201ENST00000221222 NALCNQ8IZF0 1738 aa33.61■■■□□ 2.97
HOMER3-201ENST00000221222 WAPLQ7Z5K2 1190 aa33.6■■■□□ 2.97
HOMER3-201ENST00000221222 PLEKHH1Q9ULM0 1364 aa33.59■■■□□ 2.97
HOMER3-201ENST00000221222 ADGRL3Q9HAR2 1447 aa33.58■■■□□ 2.97
HOMER3-201ENST00000221222 PRAM1Q96QH2 718 aa33.58■■■□□ 2.97
HOMER3-201ENST00000221222 CARD11Q9BXL7 1154 aa33.58■■■□□ 2.97
HOMER3-201ENST00000221222 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.58■■■□□ 2.97
HOMER3-201ENST00000221222 C14orf37Q86TY3 774 aa33.57■■■□□ 2.96
HOMER3-201ENST00000221222 C19orf44Q9H6X5 657 aa33.54■■■□□ 2.96
HOMER3-201ENST00000221222 POGKQ9P215 609 aa33.54■■■□□ 2.96
HOMER3-201ENST00000221222 SLAIN2Q9P270 581 aa33.53■■■□□ 2.96
HOMER3-201ENST00000221222 DCCP43146 1447 aa33.53■■■□□ 2.96
HOMER3-201ENST00000221222 EIF3AQ14152 1382 aaKnown RBP33.51■■■□□ 2.95
HOMER3-201ENST00000221222 ADGRB2O60241 1585 aa33.49■■■□□ 2.95
HOMER3-201ENST00000221222 CDC42BPGQ6DT37 1551 aa33.49■■■□□ 2.95
HOMER3-201ENST00000221222 QRICH2Q9H0J4 1663 aa33.47■■■□□ 2.95
HOMER3-201ENST00000221222 PHLPP1O60346 1717 aa33.47■■■□□ 2.95
HOMER3-201ENST00000221222 SAFB2Q14151 953 aaKnown RBP eCLIP33.47■■■□□ 2.95
HOMER3-201ENST00000221222 CENPJQ9HC77 1338 aaPredicted RBP33.46■■■□□ 2.95
HOMER3-201ENST00000221222 CADPS2Q86UW7 1296 aa33.43■■■□□ 2.94
HOMER3-201ENST00000221222 ATF3P18847 181 aa33.41■■■□□ 2.94
HOMER3-201ENST00000221222 USP47Q96K76 1375 aa33.4■■■□□ 2.94
HOMER3-201ENST00000221222 FMN2Q9NZ56 1722 aa33.39■■■□□ 2.94
HOMER3-201ENST00000221222 RGS17Q9UGC6 210 aaPredicted RBP33.39■■■□□ 2.94
HOMER3-201ENST00000221222 MINK1Q8N4C8 1332 aaPredicted RBP33.39■■■□□ 2.94
HOMER3-201ENST00000221222 SBNO2Q9Y2G9 1366 aa33.37■■■□□ 2.93
HOMER3-201ENST00000221222 MST1RQ04912 1400 aa33.36■■■□□ 2.93
HOMER3-201ENST00000221222 HIRIP3Q9BW71 556 aaPredicted RBP33.34■■■□□ 2.93
HOMER3-201ENST00000221222 COL16A1Q07092 1604 aaPredicted RBP33.32■■■□□ 2.92
HOMER3-201ENST00000221222 ZEB1P37275 1124 aaPredicted RBP33.32■■■□□ 2.92
HOMER3-201ENST00000221222 ST20-MTHFSA0A0A6YYL1 179 aa33.31■■■□□ 2.92
HOMER3-201ENST00000221222 WASLO00401 505 aaPredicted RBP33.31■■■□□ 2.92
HOMER3-201ENST00000221222 JCADQ9P266 1359 aa33.3■■■□□ 2.92
HOMER3-201ENST00000221222 C1orf167Q5SNV9 1468 aa33.29■■■□□ 2.92
HOMER3-201ENST00000221222 TULP4Q9NRJ4 1543 aa33.28■■■□□ 2.92
HOMER3-201ENST00000221222 USP32Q8NFA0 1604 aa33.26■■■□□ 2.92
HOMER3-201ENST00000221222 ANKARQ7Z5J8 1434 aa33.25■■■□□ 2.91
HOMER3-201ENST00000221222 EIF4G2P78344 907 aaKnown RBP eCLIP33.25■■■□□ 2.91
HOMER3-201ENST00000221222 TESK2Q96S53 571 aa33.25■■■□□ 2.91
HOMER3-201ENST00000221222 RGPD8O14715 1765 aaPredicted RBP33.24■■■□□ 2.91
HOMER3-201ENST00000221222 AHDC1Q5TGY3 1603 aaPredicted RBP33.23■■■□□ 2.91
HOMER3-201ENST00000221222 POTEAQ6S8J7 498 aa33.23■■■□□ 2.91
HOMER3-201ENST00000221222 BRINP3Q76B58 766 aa33.23■■■□□ 2.91
HOMER3-201ENST00000221222 CDK19Q9BWU1 502 aa33.23■■■□□ 2.91
HOMER3-201ENST00000221222 EVC2Q86UK5 1308 aa33.22■■■□□ 2.91
HOMER3-201ENST00000221222 SLC24A1O60721 1099 aa33.21■■■□□ 2.91
HOMER3-201ENST00000221222 ATP7BP35670 1465 aa33.19■■■□□ 2.9
HOMER3-201ENST00000221222 NUTM2FA1L443 756 aa33.19■■■□□ 2.9
HOMER3-201ENST00000221222 HSPA5P11021 654 aaKnown RBP33.19■■■□□ 2.9
HOMER3-201ENST00000221222 ITSN1Q15811 1721 aa33.18■■■□□ 2.9
HOMER3-201ENST00000221222 PRR36Q9H6K5 1346 aa33.18■■■□□ 2.9
HOMER3-201ENST00000221222 TOPAZ1Q8N9V7 1692 aa33.17■■■□□ 2.9
HOMER3-201ENST00000221222 LRP6O75581 1613 aa33.15■■■□□ 2.9
HOMER3-201ENST00000221222 KIF1AQ12756 1690 aa33.15■■■□□ 2.9
HOMER3-201ENST00000221222 SRPK2P78362 688 aaKnown RBP33.14■■■□□ 2.9
HOMER3-201ENST00000221222 ORAI2Q96SN7 254 aa33.14■■■□□ 2.9
HOMER3-201ENST00000221222 NUDT16Q96DE0 195 aaKnown RBP33.13■■■□□ 2.89
HOMER3-201ENST00000221222 CABP2Q9NPB3 220 aa33.13■■■□□ 2.89
HOMER3-201ENST00000221222 SHPRHQ149N8 1683 aa33.12■■■□□ 2.89
HOMER3-201ENST00000221222 ESCO1Q5FWF5 840 aa33.12■■■□□ 2.89
HOMER3-201ENST00000221222 MEX3CQ5U5Q3 659 aaKnown RBP33.12■■■□□ 2.89
HOMER3-201ENST00000221222 NHSL1Q5SYE7 1610 aa33.11■■■□□ 2.89
HOMER3-201ENST00000221222 SPATA31A6Q5VVP1 1343 aa33.1■■■□□ 2.89
HOMER3-201ENST00000221222 TMF1P82094 1093 aa33.09■■■□□ 2.89
HOMER3-201ENST00000221222 PUS7Q96PZ0 661 aaKnown RBP33.09■■■□□ 2.89
HOMER3-201ENST00000221222 DDX17Q92841 729 aaKnown RBP33.09■■■□□ 2.89
HOMER3-201ENST00000221222 CCDC61Q9Y6R9 512 aa33.09■■■□□ 2.89
HOMER3-201ENST00000221222 ATAD2Q6PL18 1390 aa33.07■■■□□ 2.88
HOMER3-201ENST00000221222 NUTM2BA6NNL0 878 aaPredicted RBP33.07■■■□□ 2.88
HOMER3-201ENST00000221222 NUTM2EB1AL46 878 aaPredicted RBP33.07■■■□□ 2.88
HOMER3-201ENST00000221222 NUTM2AQ8IVF1 878 aaPredicted RBP33.07■■■□□ 2.88
HOMER3-201ENST00000221222 PHF8Q9UPP1 1060 aa33.07■■■□□ 2.88
HOMER3-201ENST00000221222 PPIP5K1Q6PFW1 1433 aa33.03■■■□□ 2.88
HOMER3-201ENST00000221222 CDCA8Q53HL2 280 aa33.01■■■□□ 2.88
HOMER3-201ENST00000221222 PLEKHG3A1L390 1219 aa33■■■□□ 2.87
HOMER3-201ENST00000221222 NPHP3Q7Z494 1330 aa32.99■■■□□ 2.87
HOMER3-201ENST00000221222 PMFBP1Q8TBY8 1022 aa32.98■■■□□ 2.87
HOMER3-201ENST00000221222 POLR3AO14802 1390 aaPredicted RBP32.97■■■□□ 2.87
HOMER3-201ENST00000221222 FOXO3O43524 673 aa32.97■■■□□ 2.87
HOMER3-201ENST00000221222 PXDNQ92626 1479 aa32.96■■■□□ 2.87
HOMER3-201ENST00000221222 CABP1Q9NZU7 370 aa32.96■■■□□ 2.87
HOMER3-201ENST00000221222 LRRC59Q96AG4 307 aaKnown RBP32.95■■■□□ 2.86
HOMER3-201ENST00000221222 SOS2Q07890 1332 aaPredicted RBP32.94■■■□□ 2.86
HOMER3-201ENST00000221222 NINLQ9Y2I6 1382 aa32.93■■■□□ 2.86
HOMER3-201ENST00000221222 ZNF772Q68DY9 489 aaPredicted RBP32.92■■■□□ 2.86
HOMER3-201ENST00000221222 NGDNQ8NEJ9 315 aaKnown RBP32.92■■■□□ 2.86
HOMER3-201ENST00000221222 ACEP12821 1306 aa32.92■■■□□ 2.86
HOMER3-201ENST00000221222 AKAP12Q02952 1782 aa32.91■■■□□ 2.86
HOMER3-201ENST00000221222 PNPLA6Q8IY17 1366 aa32.91■■■□□ 2.86
HOMER3-201ENST00000221222 MYOM1P52179 1685 aa32.9■■■□□ 2.86
HOMER3-201ENST00000221222 C11orf95C9JLR9 678 aaPredicted RBP32.89■■■□□ 2.86
HOMER3-201ENST00000221222 TRPM3Q9HCF6 1732 aaPredicted RBP32.88■■■□□ 2.85
HOMER3-201ENST00000221222 PSME1Q06323 249 aa32.87■■■□□ 2.85
HOMER3-201ENST00000221222 KRT28Q7Z3Y7 464 aa32.87■■■□□ 2.85
HOMER3-201ENST00000221222 CPSF1Q10570 1443 aaKnown RBP32.87■■■□□ 2.85
HOMER3-201ENST00000221222 CD163L1Q9NR16 1453 aa32.86■■■□□ 2.85
HOMER3-201ENST00000221222 TMC1Q8TDI8 760 aa32.86■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms