RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 ADGRL3Q9HAR2 1447 aa18.5■□□□□ 0.55
TIMP1-201ENST00000218388 ST20-MTHFSA0A0A6YYL1 179 aa18.5■□□□□ 0.55
TIMP1-201ENST00000218388 SBNO2Q9Y2G9 1366 aa18.5■□□□□ 0.55
TIMP1-201ENST00000218388 NALCNQ8IZF0 1738 aa18.49■□□□□ 0.55
TIMP1-201ENST00000218388 XIRP1Q702N8 1843 aaKnown RBP18.49■□□□□ 0.55
TIMP1-201ENST00000218388 ADGRB2O60241 1585 aa18.49■□□□□ 0.55
TIMP1-201ENST00000218388 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.49■□□□□ 0.55
TIMP1-201ENST00000218388 MSH6P52701 1360 aa18.48■□□□□ 0.55
TIMP1-201ENST00000218388 HSPA5P11021 654 aaKnown RBP18.48■□□□□ 0.55
TIMP1-201ENST00000218388 RBM33Q96EV2 1170 aaKnown RBP18.47■□□□□ 0.55
TIMP1-201ENST00000218388 C19orf44Q9H6X5 657 aa18.47■□□□□ 0.55
TIMP1-201ENST00000218388 MINK1Q8N4C8 1332 aaPredicted RBP18.47■□□□□ 0.55
TIMP1-201ENST00000218388 CDC42BPGQ6DT37 1551 aa18.47■□□□□ 0.55
TIMP1-201ENST00000218388 IQSEC2Q5JU85 1478 aa18.46■□□□□ 0.55
TIMP1-201ENST00000218388 DCCP43146 1447 aa18.46■□□□□ 0.55
TIMP1-201ENST00000218388 EVC2Q86UK5 1308 aa18.44■□□□□ 0.54
TIMP1-201ENST00000218388 ATF3P18847 181 aa18.43■□□□□ 0.54
TIMP1-201ENST00000218388 TMF1P82094 1093 aa18.43■□□□□ 0.54
TIMP1-201ENST00000218388 HIRIP3Q9BW71 556 aaPredicted RBP18.43■□□□□ 0.54
TIMP1-201ENST00000218388 CADPS2Q86UW7 1296 aa18.42■□□□□ 0.54
TIMP1-201ENST00000218388 TESK2Q96S53 571 aa18.42■□□□□ 0.54
TIMP1-201ENST00000218388 WASLO00401 505 aaPredicted RBP18.41■□□□□ 0.54
TIMP1-201ENST00000218388 CDCA8Q53HL2 280 aa18.41■□□□□ 0.54
TIMP1-201ENST00000218388 FMN2Q9NZ56 1722 aa18.4■□□□□ 0.54
TIMP1-201ENST00000218388 TULP4Q9NRJ4 1543 aa18.4■□□□□ 0.54
TIMP1-201ENST00000218388 CERKQ8TCT0 537 aa18.4■□□□□ 0.54
TIMP1-201ENST00000218388 SRPK2P78362 688 aaKnown RBP18.38■□□□□ 0.53
TIMP1-201ENST00000218388 CDK19Q9BWU1 502 aa18.38■□□□□ 0.53
TIMP1-201ENST00000218388 ANKARQ7Z5J8 1434 aa18.37■□□□□ 0.53
TIMP1-201ENST00000218388 PUS7Q96PZ0 661 aaKnown RBP18.36■□□□□ 0.53
TIMP1-201ENST00000218388 ITSN1Q15811 1721 aa18.35■□□□□ 0.53
TIMP1-201ENST00000218388 ATAD2Q6PL18 1390 aa18.35■□□□□ 0.53
TIMP1-201ENST00000218388 DISP3Q9P2K9 1392 aa18.35■□□□□ 0.53
TIMP1-201ENST00000218388 MST1RQ04912 1400 aa18.33■□□□□ 0.53
TIMP1-201ENST00000218388 TOM1O60784 492 aa18.33■□□□□ 0.52
TIMP1-201ENST00000218388 CABP2Q9NPB3 220 aa18.33■□□□□ 0.52
TIMP1-201ENST00000218388 ATP7BP35670 1465 aa18.33■□□□□ 0.52
TIMP1-201ENST00000218388 C1orf167Q5SNV9 1468 aa18.32■□□□□ 0.52
TIMP1-201ENST00000218388 USP32Q8NFA0 1604 aa18.31■□□□□ 0.52
TIMP1-201ENST00000218388 NUTM2FA1L443 756 aa18.31■□□□□ 0.52
TIMP1-201ENST00000218388 NUDT16Q96DE0 195 aaKnown RBP18.31■□□□□ 0.52
TIMP1-201ENST00000218388 TOPAZ1Q8N9V7 1692 aa18.31■□□□□ 0.52
TIMP1-201ENST00000218388 RGPD8O14715 1765 aaPredicted RBP18.3■□□□□ 0.52
TIMP1-201ENST00000218388 SLAIN2Q9P270 581 aa18.3■□□□□ 0.52
TIMP1-201ENST00000218388 CCDC61Q9Y6R9 512 aa18.3■□□□□ 0.52
TIMP1-201ENST00000218388 NINLQ9Y2I6 1382 aa18.3■□□□□ 0.52
TIMP1-201ENST00000218388 KIF1AQ12756 1690 aa18.29■□□□□ 0.52
TIMP1-201ENST00000218388 UBAP1LF5GYI3 381 aa18.29■□□□□ 0.52
TIMP1-201ENST00000218388 POLR3GLQ9BT43 218 aa18.29■□□□□ 0.52
TIMP1-201ENST00000218388 PRR36Q9H6K5 1346 aa18.28■□□□□ 0.52
TIMP1-201ENST00000218388 PPIP5K1Q6PFW1 1433 aa18.27■□□□□ 0.52
TIMP1-201ENST00000218388 ESCO1Q5FWF5 840 aa18.27■□□□□ 0.52
TIMP1-201ENST00000218388 CCDC7Q96M83 1385 aa18.27■□□□□ 0.51
TIMP1-201ENST00000218388 KIF7Q2M1P5 1343 aa18.26■□□□□ 0.51
TIMP1-201ENST00000218388 ZNF316A6NFI3 1004 aaPredicted RBP18.25■□□□□ 0.51
TIMP1-201ENST00000218388 C11orf95C9JLR9 678 aaPredicted RBP18.25■□□□□ 0.51
TIMP1-201ENST00000218388 TMC1Q8TDI8 760 aa18.25■□□□□ 0.51
TIMP1-201ENST00000218388 PHF8Q9UPP1 1060 aa18.25■□□□□ 0.51
TIMP1-201ENST00000218388 ROBO1Q9Y6N7 1651 aa18.24■□□□□ 0.51
TIMP1-201ENST00000218388 MYOM1P52179 1685 aa18.23■□□□□ 0.51
TIMP1-201ENST00000218388 PLEKHG3A1L390 1219 aa18.23■□□□□ 0.51
TIMP1-201ENST00000218388 CABP1Q9NZU7 370 aa18.23■□□□□ 0.51
TIMP1-201ENST00000218388 WASHC2AQ641Q2 1341 aa18.23■□□□□ 0.51
TIMP1-201ENST00000218388 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
TIMP1-201ENST00000218388 BRINP3Q76B58 766 aa18.22■□□□□ 0.51
TIMP1-201ENST00000218388 NGDNQ8NEJ9 315 aaKnown RBP18.22■□□□□ 0.51
TIMP1-201ENST00000218388 ORAI2Q96SN7 254 aa18.22■□□□□ 0.51
TIMP1-201ENST00000218388 PIP4K2BP78356 416 aa18.21■□□□□ 0.51
TIMP1-201ENST00000218388 HDGFL2Q7Z4V5 671 aaPredicted RBP18.21■□□□□ 0.51
TIMP1-201ENST00000218388 TERF2IPQ9NYB0 399 aa18.21■□□□□ 0.51
TIMP1-201ENST00000218388 PMFBP1Q8TBY8 1022 aa18.2■□□□□ 0.5
TIMP1-201ENST00000218388 SLC12A5Q9H2X9 1139 aa18.2■□□□□ 0.5
TIMP1-201ENST00000218388 NPHP3Q7Z494 1330 aa18.2■□□□□ 0.5
TIMP1-201ENST00000218388 POLR3AO14802 1390 aaPredicted RBP18.19■□□□□ 0.5
TIMP1-201ENST00000218388 ZNF692Q9BU19 519 aaPredicted RBP18.19■□□□□ 0.5
TIMP1-201ENST00000218388 AKAP12Q02952 1782 aa18.19■□□□□ 0.5
TIMP1-201ENST00000218388 NHSL1Q5SYE7 1610 aa18.19■□□□□ 0.5
TIMP1-201ENST00000218388 ACEP12821 1306 aa18.19■□□□□ 0.5
TIMP1-201ENST00000218388 ANKRD36BQ8N2N9 1353 aa18.18■□□□□ 0.5
TIMP1-201ENST00000218388 AHDC1Q5TGY3 1603 aaPredicted RBP18.16■□□□□ 0.5
TIMP1-201ENST00000218388 CPSF1Q10570 1443 aaKnown RBP18.16■□□□□ 0.5
TIMP1-201ENST00000218388 MON2Q7Z3U7 1717 aa18.16■□□□□ 0.5
TIMP1-201ENST00000218388 FOXO3O43524 673 aa18.16■□□□□ 0.5
TIMP1-201ENST00000218388 PSME1Q06323 249 aa18.16■□□□□ 0.5
TIMP1-201ENST00000218388 BRD4O60885 1362 aaPredicted RBP18.16■□□□□ 0.5
TIMP1-201ENST00000218388 KTN1Q86UP2 1357 aaKnown RBP18.16■□□□□ 0.5
TIMP1-201ENST00000218388 A0A1W2PP64 1363 aa18.15■□□□□ 0.5
TIMP1-201ENST00000218388 CD163L1Q9NR16 1453 aa18.14■□□□□ 0.5
TIMP1-201ENST00000218388 PHLPP1O60346 1717 aa18.14■□□□□ 0.49
TIMP1-201ENST00000218388 USP6P35125 1406 aa18.14■□□□□ 0.49
TIMP1-201ENST00000218388 KRT28Q7Z3Y7 464 aa18.12■□□□□ 0.49
TIMP1-201ENST00000218388 PANK3Q9H999 370 aa18.12■□□□□ 0.49
TIMP1-201ENST00000218388 EDC4Q6P2E9 1401 aaKnown RBP18.12■□□□□ 0.49
TIMP1-201ENST00000218388 PXDNQ92626 1479 aa18.11■□□□□ 0.49
TIMP1-201ENST00000218388 NRKQ7Z2Y5 1582 aa18.11■□□□□ 0.49
TIMP1-201ENST00000218388 SBNO1A3KN83 1393 aa18.1■□□□□ 0.49
TIMP1-201ENST00000218388 SOS2Q07890 1332 aaPredicted RBP18.1■□□□□ 0.49
TIMP1-201ENST00000218388 FBXO41Q8TF61 875 aa18.1■□□□□ 0.49
TIMP1-201ENST00000218388 DDX17Q92841 729 aaKnown RBP18.1■□□□□ 0.49
TIMP1-201ENST00000218388 TRPM3Q9HCF6 1732 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms