RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 SMC4Q9NTJ3 1288 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 ZNF330Q9Y3S2 320 aaPredicted RBP5.32□□□□□ -1.56
CFTR-201ENST00000003084 PLB1Q6P1J6 1458 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 KIAA1107Q9UPP5 1409 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 GORABQ5T7V8 394 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 HSCBQ8IWL3 235 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 MAP3K1Q13233 1512 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 DIAPH1O60610 1272 aaKnown RBP5.32□□□□□ -1.56
CFTR-201ENST00000003084 TXNDC2Q86VQ3 553 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 AFAP1Q8N556 730 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 CCDC24Q8N4L8 307 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 RGS3P49796 1198 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 ANKLE2Q86XL3 938 aa5.32□□□□□ -1.56
CFTR-201ENST00000003084 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.32□□□□□ -1.56
CFTR-201ENST00000003084 PTMSP20962 102 aa5.31□□□□□ -1.56
CFTR-201ENST00000003084 HMGB2P26583 209 aaKnown RBP5.31□□□□□ -1.56
CFTR-201ENST00000003084 SMG6Q86US8 1419 aaKnown RBP5.31□□□□□ -1.56
CFTR-201ENST00000003084 E9PSI1 815 aa5.31□□□□□ -1.56
CFTR-201ENST00000003084 AKNAQ7Z591 1439 aa5.31□□□□□ -1.56
CFTR-201ENST00000003084 CTHP32929 405 aa5.31□□□□□ -1.56
CFTR-201ENST00000003084 TEX14Q8IWB6 1497 aa5.31□□□□□ -1.56
CFTR-201ENST00000003084 TEFQ10587 303 aa5.31□□□□□ -1.56
CFTR-201ENST00000003084 DNAJC5BQ9UF47 199 aa5.31□□□□□ -1.56
CFTR-201ENST00000003084 NAP1L2Q9ULW6 460 aaPredicted RBP5.31□□□□□ -1.56
CFTR-201ENST00000003084 CHMP3Q9Y3E7 222 aa5.31□□□□□ -1.56
CFTR-201ENST00000003084 WASHC2AQ641Q2 1341 aa5.3□□□□□ -1.56
CFTR-201ENST00000003084 PROSER2Q86WR7 435 aaPredicted RBP5.3□□□□□ -1.56
CFTR-201ENST00000003084 ADGRL1O94910 1474 aa5.3□□□□□ -1.56
CFTR-201ENST00000003084 ANKRD30BQ9BXX2 1392 aa5.3□□□□□ -1.56
CFTR-201ENST00000003084 PCF11O94913 1555 aaKnown RBP5.3□□□□□ -1.56
CFTR-201ENST00000003084 THOC2Q8NI27 1593 aaKnown RBP5.3□□□□□ -1.56
CFTR-201ENST00000003084 CAMSAP2Q08AD1 1489 aa5.3□□□□□ -1.56
CFTR-201ENST00000003084 CDK13Q14004 1512 aaKnown RBP5.3□□□□□ -1.56
CFTR-201ENST00000003084 SENP3-EIF4A1A0A087X0R7 540 aa5.3□□□□□ -1.56
CFTR-201ENST00000003084 DDX58O95786 925 aaKnown RBP5.3□□□□□ -1.56
CFTR-201ENST00000003084 CCDC146Q8IYE0 955 aa5.3□□□□□ -1.56
CFTR-201ENST00000003084 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.29□□□□□ -1.56
CFTR-201ENST00000003084 LMNB1P20700 586 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 NEXNQ0ZGT2 675 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 LRRFIP1Q32MZ4 808 aaKnown RBP5.29□□□□□ -1.56
CFTR-201ENST00000003084 CHMP4CQ96CF2 233 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 ZFP91Q96JP5 570 aaPredicted RBP5.29□□□□□ -1.56
CFTR-201ENST00000003084 DENND4BO75064 1496 aaPredicted RBP5.29□□□□□ -1.56
CFTR-201ENST00000003084 HTATSF1O43719 755 aaKnown RBP5.29□□□□□ -1.56
CFTR-201ENST00000003084 RNF39Q9H2S5 420 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 GJA3Q9Y6H8 435 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 CNTLNQ9NXG0 1405 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 GNL2Q13823 731 aaKnown RBP5.29□□□□□ -1.56
CFTR-201ENST00000003084 RAPGEF4Q8WZA2 1011 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 WDR97A6NE52 1622 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 ERBINQ96RT1 1412 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 PDE4AP27815 886 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 RUNDC1Q96C34 613 aa5.29□□□□□ -1.56
CFTR-201ENST00000003084 GOLGA6L4A6NEF3 574 aa5.28□□□□□ -1.56
CFTR-201ENST00000003084 PTPN23Q9H3S7 1636 aa5.28□□□□□ -1.56
CFTR-201ENST00000003084 ARHGEF11O15085 1522 aa5.28□□□□□ -1.56
CFTR-201ENST00000003084 TRIM44Q96DX7 344 aaPredicted RBP5.28□□□□□ -1.56
CFTR-201ENST00000003084 ISY1Q9ULR0 285 aaKnown RBP5.28□□□□□ -1.56
CFTR-201ENST00000003084 ARID5BQ14865 1188 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 SLC4A10Q6U841 1118 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 TCERG1O14776 1098 aaKnown RBP5.27□□□□□ -1.57
CFTR-201ENST00000003084 NRDCO43847 1150 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 HSP90B1P14625 803 aaKnown RBP5.27□□□□□ -1.57
CFTR-201ENST00000003084 GNAI1P63096 354 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 ESCO1Q5FWF5 840 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 API5Q9BZZ5 524 aaKnown RBP5.27□□□□□ -1.57
CFTR-201ENST00000003084 CCDC7Q96M83 1385 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 TBC1D8BQ0IIM8 1120 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 ZKSCAN2Q63HK3 967 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 L3MBTL3Q96JM7 780 aaPredicted RBP5.27□□□□□ -1.57
CFTR-201ENST00000003084 TSHZ2Q9NRE2 1034 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 RAPGEF6Q8TEU7 1601 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 RTEL1-TNFRSF6BF6WH68 1400 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 PLEKHO1Q53GL0 409 aaPredicted RBP5.27□□□□□ -1.57
CFTR-201ENST00000003084 GAS2L2Q8NHY3 880 aa5.27□□□□□ -1.57
CFTR-201ENST00000003084 NOL10Q9BSC4 688 aaKnown RBP5.27□□□□□ -1.57
CFTR-201ENST00000003084 ZNF608Q9ULD9 1512 aaPredicted RBP5.26□□□□□ -1.57
CFTR-201ENST00000003084 AMOTL1Q8IY63 956 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 VSIG10Q8N0Z9 540 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 PTMAP06454 111 aaKnown RBP5.26□□□□□ -1.57
CFTR-201ENST00000003084 ANKRD13DQ6ZTN6 518 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 REM2Q8IYK8 340 aaPredicted RBP5.26□□□□□ -1.57
CFTR-201ENST00000003084 ATAD2Q6PL18 1390 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 FAM135AQ9P2D6 1515 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 ZBTB24O43167 697 aaPredicted RBP5.26□□□□□ -1.57
CFTR-201ENST00000003084 RAPGEF3O95398 923 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 GPIHBP1Q8IV16 184 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 PRKRIP1Q9H875 184 aaPredicted RBP5.26□□□□□ -1.57
CFTR-201ENST00000003084 WDR62O43379 1518 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 ADAMTS12P58397 1594 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 FRAT2O75474 233 aaPredicted RBP5.26□□□□□ -1.57
CFTR-201ENST00000003084 FANCAO15360 1455 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 RIPK4P57078 832 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 ITSN2Q9NZM3 1697 aa5.26□□□□□ -1.57
CFTR-201ENST00000003084 TRIM6-TRIM34B2RNG4 842 aa5.25□□□□□ -1.57
CFTR-201ENST00000003084 APBB1O00213 710 aa5.25□□□□□ -1.57
CFTR-201ENST00000003084 ABTB2Q8N961 1025 aa5.25□□□□□ -1.57
CFTR-201ENST00000003084 CCDC34Q96HJ3 373 aa5.25□□□□□ -1.57
CFTR-201ENST00000003084 PRAM1Q96QH2 718 aa5.25□□□□□ -1.57
CFTR-201ENST00000003084 CDK19Q9BWU1 502 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms