RNA–Protein interactions for RNA: ENSMUST00000173004.1

Lsm2-207, Transcript of U6 snRNA-associated Sm-like protein LSm2, mousemouse

TSL 1 (best) BASIC

Gene Lsm2, Length 870 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2-207ENSMUST00000173004 Pik3r4Q8VD65 1358 aa18.76■□□□□ 0.59
Lsm2-207ENSMUST00000173004 Mroh1E0CZ22 1640 aa18.75■□□□□ 0.59
Lsm2-207ENSMUST00000173004 En2P09066 324 aa18.75■□□□□ 0.59
Lsm2-207ENSMUST00000173004 Ezh2Q61188 746 aaKnown RBP18.74■□□□□ 0.59
Lsm2-207ENSMUST00000173004 Kcna6Q61923 529 aa18.74■□□□□ 0.59
Lsm2-207ENSMUST00000173004 Gm10563F6WIE4 79 aa18.73■□□□□ 0.59
Lsm2-207ENSMUST00000173004 Grwd1Q810D6 446 aaKnown RBP18.73■□□□□ 0.59
Lsm2-207ENSMUST00000173004 Fam135bQ9DAI6 1403 aa18.73■□□□□ 0.59
Lsm2-207ENSMUST00000173004 AU022751B1B0V2 589 aa18.72■□□□□ 0.59
Lsm2-207ENSMUST00000173004 Hoxd11P23813 323 aa18.72■□□□□ 0.59
Lsm2-207ENSMUST00000173004 Socs7Q8VHQ2 579 aa18.72■□□□□ 0.59
Lsm2-207ENSMUST00000173004 Myom3A2ABU4 1439 aa18.72■□□□□ 0.59
Lsm2-207ENSMUST00000173004 Ppip5k1A2ARP1 1436 aa18.72■□□□□ 0.59
Lsm2-207ENSMUST00000173004 Magea1O89006 320 aa18.71■□□□□ 0.59
Lsm2-207ENSMUST00000173004 Magea5O89009 320 aa18.71■□□□□ 0.59
Lsm2-207ENSMUST00000173004 Atp1b4Q99ME6 356 aa18.71■□□□□ 0.59
Lsm2-207ENSMUST00000173004 Magea2Q9R2A2 320 aa18.71■□□□□ 0.59
Lsm2-207ENSMUST00000173004 Iqgap3F8VQ29 1632 aa18.69■□□□□ 0.58
Lsm2-207ENSMUST00000173004 Itsn2Q9Z0R6 1659 aa18.68■□□□□ 0.58
Lsm2-207ENSMUST00000173004 Shank2Q80Z38 1476 aa18.67■□□□□ 0.58
Lsm2-207ENSMUST00000173004 Map4P27546 1125 aaKnown RBP18.67■□□□□ 0.58
Lsm2-207ENSMUST00000173004 Zfp644E9QA22 1323 aa18.67■□□□□ 0.58
Lsm2-207ENSMUST00000173004 Igf2rQ07113 2483 aaKnown RBP18.66■□□□□ 0.58
Lsm2-207ENSMUST00000173004 Ttll5Q8CHB8 1328 aa18.65■□□□□ 0.58
Lsm2-207ENSMUST00000173004 Rreb1Q3UH06 1700 aaKnown RBP18.64■□□□□ 0.57
Lsm2-207ENSMUST00000173004 Ly75Q60767 1723 aa18.64■□□□□ 0.57
Lsm2-207ENSMUST00000173004 AatkQ80YE4 1365 aa18.64■□□□□ 0.57
Lsm2-207ENSMUST00000173004 Ift172Q6VH22 1749 aa18.63■□□□□ 0.57
Lsm2-207ENSMUST00000173004 Pik3c2gO70167 1506 aa18.63■□□□□ 0.57
Lsm2-207ENSMUST00000173004 Usp32F8VPZ3 1604 aa18.63■□□□□ 0.57
Lsm2-207ENSMUST00000173004 HrcG5E8J6 738 aa18.62■□□□□ 0.57
Lsm2-207ENSMUST00000173004 Shq1Q7TMX5 569 aa18.62■□□□□ 0.57
Lsm2-207ENSMUST00000173004 Wnk3Q80XP9 1757 aa18.62■□□□□ 0.57
Lsm2-207ENSMUST00000173004 PtpruB1AUH1 1446 aa18.6■□□□□ 0.57
Lsm2-207ENSMUST00000173004 Ubxn2bQ0KL01 331 aa18.6■□□□□ 0.57
Lsm2-207ENSMUST00000173004 Apba2P98084 750 aa18.59■□□□□ 0.57
Lsm2-207ENSMUST00000173004 Ccdc129Q14B48 1034 aa18.59■□□□□ 0.57
Lsm2-207ENSMUST00000173004 Zcwpw1Q6IR42 630 aa18.59■□□□□ 0.57
Lsm2-207ENSMUST00000173004 Gpr150Q8BL07 427 aa18.58■□□□□ 0.56
Lsm2-207ENSMUST00000173004 Nup153E9Q3G8 1462 aaKnown RBP18.58■□□□□ 0.56
Lsm2-207ENSMUST00000173004 Plekhg1F6S200 1446 aa18.57■□□□□ 0.56
Lsm2-207ENSMUST00000173004 Nup155Q99P88 1391 aaKnown RBP18.57■□□□□ 0.56
Lsm2-207ENSMUST00000173004 Lrp5Q91VN0 1614 aa18.56■□□□□ 0.56
Lsm2-207ENSMUST00000173004 Cd109Q8R422 1442 aa18.56■□□□□ 0.56
Lsm2-207ENSMUST00000173004 Atp10bB1AWN4 1474 aa18.55■□□□□ 0.56
Lsm2-207ENSMUST00000173004 Atp7bQ64446 1462 aa18.55■□□□□ 0.56
Lsm2-207ENSMUST00000173004 Nsd2Q8BVE8 1365 aa18.55■□□□□ 0.56
Lsm2-207ENSMUST00000173004 Nrxn1Q9CS84 1514 aa18.53■□□□□ 0.56
Lsm2-207ENSMUST00000173004 Q3UJC8 639 aa18.52■□□□□ 0.56
Lsm2-207ENSMUST00000173004 Cadps2Q8BYR5 1297 aa18.52■□□□□ 0.56
Lsm2-207ENSMUST00000173004 Camta1A2A891 1682 aa18.51■□□□□ 0.55
Lsm2-207ENSMUST00000173004 Txnrd1Q9JMH6 613 aa18.51■□□□□ 0.55
Lsm2-207ENSMUST00000173004 Cps1Q8C196 1500 aa18.5■□□□□ 0.55
Lsm2-207ENSMUST00000173004 Sirt1Q923E4 737 aa18.5■□□□□ 0.55
Lsm2-207ENSMUST00000173004 Kif20bQ80WE4 1774 aaKnown RBP18.49■□□□□ 0.55
Lsm2-207ENSMUST00000173004 Myom1Q62234 1667 aaKnown RBP18.48■□□□□ 0.55
Lsm2-207ENSMUST00000173004 Dhx9O70133 1380 aaKnown RBP18.48■□□□□ 0.55
Lsm2-207ENSMUST00000173004 Tmem2Q5FWI3 1383 aa18.48■□□□□ 0.55
Lsm2-207ENSMUST00000173004 Idi1P58044 227 aa18.48■□□□□ 0.55
Lsm2-207ENSMUST00000173004 ErbinQ80TH2 1402 aa18.48■□□□□ 0.55
Lsm2-207ENSMUST00000173004 Cdhr2E9Q7P9 1308 aa18.48■□□□□ 0.55
Lsm2-207ENSMUST00000173004 Astn2Q80Z10 1352 aa18.46■□□□□ 0.55
Lsm2-207ENSMUST00000173004 Clstn2Q9ER65 966 aa18.46■□□□□ 0.55
Lsm2-207ENSMUST00000173004 Kcnq2Q9Z351 759 aa18.46■□□□□ 0.55
Lsm2-207ENSMUST00000173004 Pola1P33609 1465 aa18.46■□□□□ 0.54
Lsm2-207ENSMUST00000173004 Taok3Q8BYC6 898 aa18.45■□□□□ 0.54
Lsm2-207ENSMUST00000173004 Ehmt2Q9Z148 1263 aaKnown RBP18.45■□□□□ 0.54
Lsm2-207ENSMUST00000173004 Zmym3Q9JLM4 1370 aa18.44■□□□□ 0.54
Lsm2-207ENSMUST00000173004 MaddQ80U28 1577 aa18.43■□□□□ 0.54
Lsm2-207ENSMUST00000173004 Edc4Q3UJB9 1406 aaKnown RBP18.43■□□□□ 0.54
Lsm2-207ENSMUST00000173004 Sox12Q04890 314 aa18.43■□□□□ 0.54
Lsm2-207ENSMUST00000173004 Abca15E9PWH4 1668 aa18.43■□□□□ 0.54
Lsm2-207ENSMUST00000173004 Ppp6r1Q7TSI3 856 aa18.42■□□□□ 0.54
Lsm2-207ENSMUST00000173004 Cacna1sQ02789 1880 aa18.41■□□□□ 0.54
Lsm2-207ENSMUST00000173004 Nfat5Q9WV30 1534 aa18.41■□□□□ 0.54
Lsm2-207ENSMUST00000173004 Ccdc85cE9Q6B2 420 aa18.41■□□□□ 0.54
Lsm2-207ENSMUST00000173004 4930523C07RikE9Q2T4 99 aa18.39■□□□□ 0.53
Lsm2-207ENSMUST00000173004 NclP09405 707 aaKnown RBP18.39■□□□□ 0.53
Lsm2-207ENSMUST00000173004 D430041D05RikF6ZGR6 1678 aa18.38■□□□□ 0.53
Lsm2-207ENSMUST00000173004 Rab3gap2Q8BMG7 1366 aa18.38■□□□□ 0.53
Lsm2-207ENSMUST00000173004 Mia2Q91ZV0 1396 aa18.38■□□□□ 0.53
Lsm2-207ENSMUST00000173004 Kif1aP33173 1695 aa18.38■□□□□ 0.53
Lsm2-207ENSMUST00000173004 Rtl5Q5DTT4 599 aa18.37■□□□□ 0.53
Lsm2-207ENSMUST00000173004 Dixdc1Q80Y83 711 aa18.37■□□□□ 0.53
Lsm2-207ENSMUST00000173004 UtrnE9Q6R7 3430 aa18.36■□□□□ 0.53
Lsm2-207ENSMUST00000173004 Slc35g1Q8BY79 368 aa18.36■□□□□ 0.53
Lsm2-207ENSMUST00000173004 Acin1Q9JIX8 1338 aaKnown RBP18.35■□□□□ 0.53
Lsm2-207ENSMUST00000173004 Rad23bP54728 416 aa18.35■□□□□ 0.53
Lsm2-207ENSMUST00000173004 Trak1Q6PD31 939 aa18.35■□□□□ 0.53
Lsm2-207ENSMUST00000173004 Fer1l6E0CZ42 1862 aa18.35■□□□□ 0.53
Lsm2-207ENSMUST00000173004 C5P06684 1680 aa18.34■□□□□ 0.53
Lsm2-207ENSMUST00000173004 Als2Q920R0 1651 aa18.34■□□□□ 0.53
Lsm2-207ENSMUST00000173004 Col16a1Q8BLX7 1580 aa18.34■□□□□ 0.53
Lsm2-207ENSMUST00000173004 Wdr17E9Q271 1322 aa18.34■□□□□ 0.53
Lsm2-207ENSMUST00000173004 Stk26Q99JT2 416 aa18.34■□□□□ 0.53
Lsm2-207ENSMUST00000173004 Rnf180Q3U827 592 aa18.33■□□□□ 0.52
Lsm2-207ENSMUST00000173004 Sgip1Q8VD37 806 aa18.33■□□□□ 0.52
Lsm2-207ENSMUST00000173004 Cep170bQ80U49 1574 aa18.33■□□□□ 0.52
Lsm2-207ENSMUST00000173004 Mast2Q60592 1734 aa18.32■□□□□ 0.52
Lsm2-207ENSMUST00000173004 Erbb3Q61526 1339 aa18.32■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms