RNA–Protein interactions for RNA: ENSMUST00000106653.3

Usp47-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Usp47, Length 5,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-201ENSMUST00000106653 Mical1Q8VDP3 1048 aa20.42■□□□□ 0.86
Usp47-201ENSMUST00000106653 NexnQ7TPW1 607 aa20.42■□□□□ 0.86
Usp47-201ENSMUST00000106653 Grin2aP35436 1464 aa20.42■□□□□ 0.86
Usp47-201ENSMUST00000106653 4933402E13RikQ9D4D2 429 aa20.42■□□□□ 0.86
Usp47-201ENSMUST00000106653 Rrp12Q6P5B0 1295 aaKnown RBP20.41■□□□□ 0.86
Usp47-201ENSMUST00000106653 Mphosph10Q810V0 681 aaKnown RBP20.41■□□□□ 0.86
Usp47-201ENSMUST00000106653 Igf1rQ60751 1373 aa20.41■□□□□ 0.86
Usp47-201ENSMUST00000106653 Cyp46a1Q9WVK8 500 aa20.4■□□□□ 0.86
Usp47-201ENSMUST00000106653 Abcc5Q9R1X5 1436 aa20.4■□□□□ 0.86
Usp47-201ENSMUST00000106653 PhaxQ9JJT9 385 aaKnown RBP20.4■□□□□ 0.86
Usp47-201ENSMUST00000106653 Evi5lH3BKQ3 813 aa20.4■□□□□ 0.86
Usp47-201ENSMUST00000106653 Cplx2P84086 134 aa20.4■□□□□ 0.86
Usp47-201ENSMUST00000106653 Srek1Q8BZX4 494 aaKnown RBP20.39■□□□□ 0.86
Usp47-201ENSMUST00000106653 Glipr1l2Q9CQ35 332 aa20.39■□□□□ 0.86
Usp47-201ENSMUST00000106653 Zranb3Q6NZP1 1069 aa20.39■□□□□ 0.85
Usp47-201ENSMUST00000106653 Dennd6aQ8BH65 605 aa20.39■□□□□ 0.85
Usp47-201ENSMUST00000106653 Dhx16G3X8X0 1044 aaKnown RBP20.38■□□□□ 0.85
Usp47-201ENSMUST00000106653 Ccdc183A2AJB1 534 aa20.38■□□□□ 0.85
Usp47-201ENSMUST00000106653 Cabp2Q9JLK4 216 aa20.38■□□□□ 0.85
Usp47-201ENSMUST00000106653 Gm21969J3QJZ1 289 aa20.38■□□□□ 0.85
Usp47-201ENSMUST00000106653 Tomm22Q9CPQ3 142 aa20.37■□□□□ 0.85
Usp47-201ENSMUST00000106653 Ppm1fQ8CGA0 452 aa20.37■□□□□ 0.85
Usp47-201ENSMUST00000106653 BcanQ61361 883 aa20.37■□□□□ 0.85
Usp47-201ENSMUST00000106653 Nek4Q9Z1J2 792 aa20.37■□□□□ 0.85
Usp47-201ENSMUST00000106653 Fmnl2A2APV2 1086 aa20.36■□□□□ 0.85
Usp47-201ENSMUST00000106653 SkilQ60665 675 aa20.36■□□□□ 0.85
Usp47-201ENSMUST00000106653 Ttll13A4Q9F6 804 aa20.36■□□□□ 0.85
Usp47-201ENSMUST00000106653 Slc52a2Q9D8F3 450 aa20.36■□□□□ 0.85
Usp47-201ENSMUST00000106653 Sh3bgrQ9WUZ7 214 aa20.36■□□□□ 0.85
Usp47-201ENSMUST00000106653 Evc2Q8K1G2 1220 aa20.35■□□□□ 0.85
Usp47-201ENSMUST00000106653 Ddrgk1Q80WW9 315 aa20.34■□□□□ 0.85
Usp47-201ENSMUST00000106653 Mcm2P97310 904 aa20.34■□□□□ 0.85
Usp47-201ENSMUST00000106653 Gpatch11Q3UFS4 262 aa20.34■□□□□ 0.85
Usp47-201ENSMUST00000106653 TefQ9JLC6 301 aa20.34■□□□□ 0.85
Usp47-201ENSMUST00000106653 Asxl1P59598 1514 aa20.34■□□□□ 0.85
Usp47-201ENSMUST00000106653 Ppp2r3aB2RXC8 1150 aa20.34■□□□□ 0.85
Usp47-201ENSMUST00000106653 Ttc21bQ0HA38 1315 aa20.33■□□□□ 0.85
Usp47-201ENSMUST00000106653 Smc3Q9CW03 1217 aaKnown RBP20.33■□□□□ 0.85
Usp47-201ENSMUST00000106653 Gnl3lQ6PGG6 577 aaKnown RBP20.33■□□□□ 0.85
Usp47-201ENSMUST00000106653 Chmp4cQ9D7F7 232 aa20.33■□□□□ 0.85
Usp47-201ENSMUST00000106653 Dusp27Q148W8 1138 aa20.33■□□□□ 0.84
Usp47-201ENSMUST00000106653 Caskin1Q6P9K8 1431 aa20.33■□□□□ 0.84
Usp47-201ENSMUST00000106653 PrxO55103 1391 aa20.33■□□□□ 0.84
Usp47-201ENSMUST00000106653 Becn1O88597 448 aa20.33■□□□□ 0.84
Usp47-201ENSMUST00000106653 Gimap6Q8K349 305 aa20.33■□□□□ 0.84
Usp47-201ENSMUST00000106653 CrcpO35427 148 aa20.32■□□□□ 0.84
Usp47-201ENSMUST00000106653 Kiaa0754Q69ZZ9 979 aa20.32■□□□□ 0.84
Usp47-201ENSMUST00000106653 Vps53Q8CCB4 832 aa20.32■□□□□ 0.84
Usp47-201ENSMUST00000106653 Cnnm1Q0GA42 951 aa20.31■□□□□ 0.84
Usp47-201ENSMUST00000106653 HnrnpmQ9D0E1 729 aaKnown RBP20.31■□□□□ 0.84
Usp47-201ENSMUST00000106653 Mlh3A0A1Y7VMP7 1443 aa20.31■□□□□ 0.84
Usp47-201ENSMUST00000106653 Rfx7F8VPJ6 1459 aa20.31■□□□□ 0.84
Usp47-201ENSMUST00000106653 Gm21698A0A087WQP8 267 aa20.3■□□□□ 0.84
Usp47-201ENSMUST00000106653 Gm21671G3UY31 267 aa20.3■□□□□ 0.84
Usp47-201ENSMUST00000106653 Fkbp4P30416 458 aa20.3■□□□□ 0.84
Usp47-201ENSMUST00000106653 Eva1cP58659 440 aa20.3■□□□□ 0.84
Usp47-201ENSMUST00000106653 Trim30aP15533 496 aa20.29■□□□□ 0.84
Usp47-201ENSMUST00000106653 PalmQ9Z0P4 383 aa20.29■□□□□ 0.84
Usp47-201ENSMUST00000106653 IbtkQ6ZPR6 1352 aaKnown RBP20.29■□□□□ 0.84
Usp47-201ENSMUST00000106653 Stk3Q9JI10 497 aa20.29■□□□□ 0.84
Usp47-201ENSMUST00000106653 Cplx1P63040 134 aa20.29■□□□□ 0.84
Usp47-201ENSMUST00000106653 Smg7Q5RJH6 1138 aaKnown RBP20.29■□□□□ 0.84
Usp47-201ENSMUST00000106653 BccipQ9CWI3 316 aa20.29■□□□□ 0.84
Usp47-201ENSMUST00000106653 Tpm3P21107 285 aaKnown RBP20.28■□□□□ 0.84
Usp47-201ENSMUST00000106653 Chrna2Q91X60 512 aa20.28■□□□□ 0.84
Usp47-201ENSMUST00000106653 Krt82Q99M74 516 aa20.28■□□□□ 0.84
Usp47-201ENSMUST00000106653 Zkscan2G3X952 960 aa20.28■□□□□ 0.84
Usp47-201ENSMUST00000106653 Bicd2Q921C5 820 aa20.28■□□□□ 0.84
Usp47-201ENSMUST00000106653 VgfQ0VGU4 617 aa20.28■□□□□ 0.84
Usp47-201ENSMUST00000106653 Utp3Q9JI13 469 aaKnown RBP20.28■□□□□ 0.84
Usp47-201ENSMUST00000106653 Ankrd26Q811D2 1581 aa20.28■□□□□ 0.84
Usp47-201ENSMUST00000106653 Gnai2P08752 355 aaKnown RBP20.27■□□□□ 0.84
Usp47-201ENSMUST00000106653 Kif4P33174 1231 aa20.27■□□□□ 0.84
Usp47-201ENSMUST00000106653 Tnnt2P50752 301 aa20.27■□□□□ 0.84
Usp47-201ENSMUST00000106653 Fchsd2Q3USJ8 740 aa20.27■□□□□ 0.84
Usp47-201ENSMUST00000106653 Kri1Q8VDQ9 704 aaKnown RBP20.27■□□□□ 0.84
Usp47-201ENSMUST00000106653 Cchcr1Q8K2I2 770 aa20.26■□□□□ 0.83
Usp47-201ENSMUST00000106653 Cdc37l1Q9CZP7 335 aa20.26■□□□□ 0.83
Usp47-201ENSMUST00000106653 Gripap1Q8VD04 806 aa20.25■□□□□ 0.83
Usp47-201ENSMUST00000106653 PsapQ61207 557 aaKnown RBP20.25■□□□□ 0.83
Usp47-201ENSMUST00000106653 Polr3gQ6NXY9 223 aa20.25■□□□□ 0.83
Usp47-201ENSMUST00000106653 Ccp110Q7TSH4 1004 aa20.25■□□□□ 0.83
Usp47-201ENSMUST00000106653 Rec8Q8C5S7 591 aa20.25■□□□□ 0.83
Usp47-201ENSMUST00000106653 FosbP13346 338 aa20.24■□□□□ 0.83
Usp47-201ENSMUST00000106653 Sall3Q62255 1320 aa20.24■□□□□ 0.83
Usp47-201ENSMUST00000106653 Slx4Q6P1D7 1565 aa20.24■□□□□ 0.83
Usp47-201ENSMUST00000106653 Nphp1Q9QY53 687 aa20.24■□□□□ 0.83
Usp47-201ENSMUST00000106653 Larp1bA0A0A6YXJ7 370 aaKnown RBP20.23■□□□□ 0.83
Usp47-201ENSMUST00000106653 Sf3b2Q3UJB0 878 aaKnown RBP20.23■□□□□ 0.83
Usp47-201ENSMUST00000106653 Psma5Q9Z2U1 241 aaKnown RBP20.23■□□□□ 0.83
Usp47-201ENSMUST00000106653 Ints3Q7TPD0 1041 aaKnown RBP20.22■□□□□ 0.83
Usp47-201ENSMUST00000106653 PogkQ80TC5 607 aa20.22■□□□□ 0.83
Usp47-201ENSMUST00000106653 Noc3lQ8VI84 807 aaKnown RBP20.22■□□□□ 0.83
Usp47-201ENSMUST00000106653 GphnQ8BUV3 769 aaKnown RBP20.22■□□□□ 0.83
Usp47-201ENSMUST00000106653 Ush1cQ9ES64 910 aa20.22■□□□□ 0.83
Usp47-201ENSMUST00000106653 Tpm2P58774 284 aa20.22■□□□□ 0.83
Usp47-201ENSMUST00000106653 A0A1L1SQF0 893 aa20.21■□□□□ 0.83
Usp47-201ENSMUST00000106653 Isy1Q69ZQ2 285 aaKnown RBP20.21■□□□□ 0.83
Usp47-201ENSMUST00000106653 Mad1l1Q9WTX8 717 aaKnown RBP20.21■□□□□ 0.83
Usp47-201ENSMUST00000106653 Tpm4Q6IRU2 248 aa20.21■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms