RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Tmco3Q8BH01 678 aa18.13■□□□□ 0.49
Chd3-201ENSMUST00000092971 IkQ9Z1M8 557 aaKnown RBP18.13■□□□□ 0.49
Chd3-201ENSMUST00000092971 Baz1aO88379 1555 aa18.13■□□□□ 0.49
Chd3-201ENSMUST00000092971 Slc13a4Q8BZ82 625 aa18.12■□□□□ 0.49
Chd3-201ENSMUST00000092971 Rbm5Q91YE7 815 aaKnown RBP18.12■□□□□ 0.49
Chd3-201ENSMUST00000092971 Trim58Q5NCC9 485 aa18.12■□□□□ 0.49
Chd3-201ENSMUST00000092971 Erc2Q6PH08 957 aa18.11■□□□□ 0.49
Chd3-201ENSMUST00000092971 ItpripQ3TNL8 555 aa18.11■□□□□ 0.49
Chd3-201ENSMUST00000092971 Hap1O35668 628 aa18.11■□□□□ 0.49
Chd3-201ENSMUST00000092971 Gigyf1Q99MR1 1044 aaKnown RBP18.11■□□□□ 0.49
Chd3-201ENSMUST00000092971 Agtpbp1Q641K1 1218 aa18.1■□□□□ 0.49
Chd3-201ENSMUST00000092971 Def6Q8C2K1 630 aa18.1■□□□□ 0.49
Chd3-201ENSMUST00000092971 Cyp46a1Q9WVK8 500 aa18.1■□□□□ 0.49
Chd3-201ENSMUST00000092971 Ccdc173A0JLY1 547 aa18.1■□□□□ 0.49
Chd3-201ENSMUST00000092971 Sart1Q9Z315 806 aaKnown RBP18.1■□□□□ 0.49
Chd3-201ENSMUST00000092971 Kif3cO35066 796 aa18.1■□□□□ 0.49
Chd3-201ENSMUST00000092971 EzrP26040 586 aaKnown RBP18.1■□□□□ 0.49
Chd3-201ENSMUST00000092971 Znf692Q3U381 531 aa18.1■□□□□ 0.49
Chd3-201ENSMUST00000092971 Kif16bB1AVY7 1312 aa18.1■□□□□ 0.49
Chd3-201ENSMUST00000092971 Fam184bQ0KK56 942 aa18.09■□□□□ 0.49
Chd3-201ENSMUST00000092971 Ssr1Q9CY50 286 aaKnown RBP18.09■□□□□ 0.49
Chd3-201ENSMUST00000092971 Fyb1O35601 819 aa18.09■□□□□ 0.49
Chd3-201ENSMUST00000092971 NexnQ7TPW1 607 aa18.08■□□□□ 0.48
Chd3-201ENSMUST00000092971 Kcnj4P52189 445 aa18.08■□□□□ 0.48
Chd3-201ENSMUST00000092971 NacadQ5SWP3 1504 aa18.08■□□□□ 0.48
Chd3-201ENSMUST00000092971 Ccdc183A2AJB1 534 aa18.07■□□□□ 0.48
Chd3-201ENSMUST00000092971 Sv2bQ8BG39 683 aa18.07■□□□□ 0.48
Chd3-201ENSMUST00000092971 Sel1lQ9Z2G6 790 aa18.07■□□□□ 0.48
Chd3-201ENSMUST00000092971 Ccdc30Q8BVF4 654 aa18.07■□□□□ 0.48
Chd3-201ENSMUST00000092971 Cdca7Q9D0M2 382 aa18.07■□□□□ 0.48
Chd3-201ENSMUST00000092971 Cdkn1cP49919 348 aa18.06■□□□□ 0.48
Chd3-201ENSMUST00000092971 Gbp4Q61107 620 aa18.06■□□□□ 0.48
Chd3-201ENSMUST00000092971 Usp47Q8BY87 1376 aa18.06■□□□□ 0.48
Chd3-201ENSMUST00000092971 Olfml1Q8BSH2 233 aa18.06■□□□□ 0.48
Chd3-201ENSMUST00000092971 Tnpo1Q8BFY9 898 aaKnown RBP18.06■□□□□ 0.48
Chd3-201ENSMUST00000092971 MycnP03966 462 aaKnown RBP18.06■□□□□ 0.48
Chd3-201ENSMUST00000092971 Kcnh8P59111 1102 aa18.06■□□□□ 0.48
Chd3-201ENSMUST00000092971 Nol8Q3UHX0 1147 aaKnown RBP18.05■□□□□ 0.48
Chd3-201ENSMUST00000092971 Ccdc181Q80ZU5 509 aa18.05■□□□□ 0.48
Chd3-201ENSMUST00000092971 Stk38Q91VJ4 465 aa18.04■□□□□ 0.48
Chd3-201ENSMUST00000092971 CalrP14211 416 aaKnown RBP18.04■□□□□ 0.48
Chd3-201ENSMUST00000092971 Rpgrip1lQ8CG73 1264 aa18.04■□□□□ 0.48
Chd3-201ENSMUST00000092971 UvssaQ9D479 717 aa18.04■□□□□ 0.48
Chd3-201ENSMUST00000092971 Pip4k2bQ80XI4 416 aa18.03■□□□□ 0.48
Chd3-201ENSMUST00000092971 Cep112Q5PR68 954 aa18.03■□□□□ 0.48
Chd3-201ENSMUST00000092971 Prpf4bQ61136 1007 aaKnown RBP18.03■□□□□ 0.48
Chd3-201ENSMUST00000092971 Ints3Q7TPD0 1041 aaKnown RBP18.03■□□□□ 0.48
Chd3-201ENSMUST00000092971 Kif3aP28741 701 aa18.02■□□□□ 0.48
Chd3-201ENSMUST00000092971 Washc4Q3UMB9 1173 aa18.02■□□□□ 0.48
Chd3-201ENSMUST00000092971 Zscan10Q3URR7 782 aa18.02■□□□□ 0.48
Chd3-201ENSMUST00000092971 Psma5Q9Z2U1 241 aaKnown RBP18.02■□□□□ 0.48
Chd3-201ENSMUST00000092971 Rnf187Q8BFX1 236 aa18.02■□□□□ 0.47
Chd3-201ENSMUST00000092971 Gm10471E9Q1C7 252 aa18.01■□□□□ 0.47
Chd3-201ENSMUST00000092971 Kiaa0753Q6A000 959 aa18.01■□□□□ 0.47
Chd3-201ENSMUST00000092971 Znf526Q8BI66 675 aa18.01■□□□□ 0.47
Chd3-201ENSMUST00000092971 Tex19.1Q99MV2 351 aa18.01■□□□□ 0.47
Chd3-201ENSMUST00000092971 TbcaP48428 108 aaKnown RBP18.01■□□□□ 0.47
Chd3-201ENSMUST00000092971 Eif5P59325 429 aaKnown RBP18.01■□□□□ 0.47
Chd3-201ENSMUST00000092971 Cnnm3Q32NY4 713 aa18.01■□□□□ 0.47
Chd3-201ENSMUST00000092971 Lamb3Q61087 1168 aa18.01■□□□□ 0.47
Chd3-201ENSMUST00000092971 Cchcr1Q8K2I2 770 aa18.01■□□□□ 0.47
Chd3-201ENSMUST00000092971 Larp1Q6ZQ58 1072 aaKnown RBP18.01■□□□□ 0.47
Chd3-201ENSMUST00000092971 Ttll5Q8CHB8 1328 aa18.01■□□□□ 0.47
Chd3-201ENSMUST00000092971 CastP51125 788 aa18.01■□□□□ 0.47
Chd3-201ENSMUST00000092971 Abcd1P48410 736 aa18.01■□□□□ 0.47
Chd3-201ENSMUST00000092971 Ttll13A4Q9F6 804 aa18■□□□□ 0.47
Chd3-201ENSMUST00000092971 Plekhh2Q8C115 1491 aa18■□□□□ 0.47
Chd3-201ENSMUST00000092971 Ccdc102aQ3TMW1 549 aa17.99■□□□□ 0.47
Chd3-201ENSMUST00000092971 Dnajc2P54103 621 aaKnown RBP17.99■□□□□ 0.47
Chd3-201ENSMUST00000092971 Bag1Q60739 355 aa17.99■□□□□ 0.47
Chd3-201ENSMUST00000092971 Fkbp4P30416 458 aa17.99■□□□□ 0.47
Chd3-201ENSMUST00000092971 Pde1cQ64338 706 aa17.99■□□□□ 0.47
Chd3-201ENSMUST00000092971 Smc2Q8CG48 1191 aaKnown RBP17.98■□□□□ 0.47
Chd3-201ENSMUST00000092971 Gnai1B2RSH2 354 aa17.98■□□□□ 0.47
Chd3-201ENSMUST00000092971 Gnai3Q9DC51 354 aa17.98■□□□□ 0.47
Chd3-201ENSMUST00000092971 Mrvi1Q9WUX5 899 aaKnown RBP17.98■□□□□ 0.47
Chd3-201ENSMUST00000092971 Stard8Q8K031 1019 aa17.98■□□□□ 0.47
Chd3-201ENSMUST00000092971 Odf2lQ9D478 642 aa17.98■□□□□ 0.47
Chd3-201ENSMUST00000092971 Erc1Q99MI1 1120 aa17.98■□□□□ 0.47
Chd3-201ENSMUST00000092971 TimelessQ9R1X4 1197 aa17.98■□□□□ 0.47
Chd3-201ENSMUST00000092971 Tax1bp1Q3UKC1 814 aaKnown RBP17.97■□□□□ 0.47
Chd3-201ENSMUST00000092971 Trim55G3X8Y1 545 aa17.97■□□□□ 0.47
Chd3-201ENSMUST00000092971 Erlin2Q8BFZ9 340 aa17.97■□□□□ 0.47
Chd3-201ENSMUST00000092971 Tango6Q8C3S2 1079 aa17.97■□□□□ 0.47
Chd3-201ENSMUST00000092971 TnmdQ9EP64 317 aa17.97■□□□□ 0.47
Chd3-201ENSMUST00000092971 Cnnm1Q0GA42 951 aa17.97■□□□□ 0.47
Chd3-201ENSMUST00000092971 Gps2Q921N8 327 aa17.96■□□□□ 0.47
Chd3-201ENSMUST00000092971 Zpr1Q62384 459 aa17.96■□□□□ 0.47
Chd3-201ENSMUST00000092971 Rab11fip3Q8CHD8 1047 aa17.96■□□□□ 0.47
Chd3-201ENSMUST00000092971 Serpina10Q8R121 448 aa17.96■□□□□ 0.47
Chd3-201ENSMUST00000092971 Lrrcc1Q69ZB0 1026 aa17.96■□□□□ 0.47
Chd3-201ENSMUST00000092971 Tmx4Q8C0L0 335 aa17.96■□□□□ 0.47
Chd3-201ENSMUST00000092971 Swt1Q9DBQ9 907 aa17.96■□□□□ 0.47
Chd3-201ENSMUST00000092971 Mctp1E9PV86 951 aa17.95■□□□□ 0.46
Chd3-201ENSMUST00000092971 Ell2Q3UKU1 639 aa17.95■□□□□ 0.46
Chd3-201ENSMUST00000092971 Nol7Q9D7Z3 254 aaKnown RBP17.95■□□□□ 0.46
Chd3-201ENSMUST00000092971 Jakmip1Q8BVL9 626 aa17.95■□□□□ 0.46
Chd3-201ENSMUST00000092971 PdcQ9QW08 244 aa17.95■□□□□ 0.46
Chd3-201ENSMUST00000092971 Ccnb3Q810T2 1396 aa17.95■□□□□ 0.46
Chd3-201ENSMUST00000092971 Q9D9S1 216 aa17.94■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms