RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Ppp1r9bQ6R891 817 aaKnown RBP19.64■□□□□ 0.74
Col17a1-202ENSMUST00000086923 Dhx8A2A4P0 1244 aaKnown RBP19.64■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Triml2E9PW10 424 aa19.64■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Tsen2Q6P7W5 460 aa19.64■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Ccdc181Q80ZU5 509 aa19.64■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Pibf1E9Q6K3 756 aa19.63■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Serpinb6bO08804 377 aa19.63■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Paxbp1P58501 919 aa19.63■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Usp47Q8BY87 1376 aa19.63■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Nat10Q8K224 1024 aaKnown RBP19.63■□□□□ 0.73
Col17a1-202ENSMUST00000086923 ImpactO55091 318 aa19.62■□□□□ 0.73
Col17a1-202ENSMUST00000086923 TnmdQ9EP64 317 aa19.62■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Ints3Q7TPD0 1041 aaKnown RBP19.62■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Pmfbp1Q9WVQ0 1022 aa19.62■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Kiaa0753Q6A000 959 aa19.62■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Chmp3Q9CQ10 224 aa19.62■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Cabp1Q9JLK7 227 aa19.62■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Cfap58B2RW38 873 aa19.62■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Lekr1B2RVN1 116 aa19.61■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Gm21969J3QJZ1 289 aa19.61■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Slc4a10Q5DTL9 1118 aa19.61■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Exoc8Q6PGF7 716 aa19.61■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Ctr9Q62018 1173 aaKnown RBP19.61■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Cc2d1aQ8K1A6 943 aa19.61■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Fbxo3Q9DC63 480 aa19.61■□□□□ 0.73
Col17a1-202ENSMUST00000086923 FosbP13346 338 aa19.6■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Utp14aQ640M1 767 aaKnown RBP19.6■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Brd2Q7JJ13 798 aaKnown RBP19.6■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Gbp4Q61107 620 aa19.6■□□□□ 0.73
Col17a1-202ENSMUST00000086923 HmmrQ00547 794 aaKnown RBP19.6■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Dnaaf4Q8R368 420 aa19.6■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Gprasp1Q5U4C1 1347 aa19.59■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Cchcr1Q8K2I2 770 aa19.59■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Kif27Q7M6Z4 1394 aa19.59■□□□□ 0.73
Col17a1-202ENSMUST00000086923 AnlnQ8K298 1121 aaKnown RBP19.58■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Cplx1P63040 134 aa19.58■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Clcn1Q64347 994 aa19.58■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Med4Q9CQA5 270 aa19.57■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Cog6Q8R3I3 657 aa19.57■□□□□ 0.72
Col17a1-202ENSMUST00000086923 L3mbtl2P59178 703 aa19.57■□□□□ 0.72
Col17a1-202ENSMUST00000086923 NgefQ8CHT1 710 aa19.57■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Trim25Q61510 634 aaKnown RBP19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 NexnQ7TPW1 607 aa19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Ppm1eQ80TL0 749 aa19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Smc1bQ920F6 1248 aa19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 GsdmaQ9EST1 446 aa19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Birc3O08863 600 aa19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Samm50Q8BGH2 469 aa19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Ccdc47Q9D024 483 aaKnown RBP19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Mctp1E9PV86 951 aa19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Spag9Q58A65 1321 aaKnown RBP19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Nap1l1P28656 391 aaKnown RBP19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Rassf4Q8CB96 322 aa19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Kif2aP28740 705 aa19.55■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Uri1Q3TLD5 531 aa19.55■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Rpap1Q80TE0 1409 aa19.55■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Tmx4Q8C0L0 335 aa19.55■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Hmox1P14901 289 aa19.54■□□□□ 0.72
Col17a1-202ENSMUST00000086923 CenphQ9QYM8 241 aa19.54■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Pds5bQ4VA53 1446 aaKnown RBP19.54■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Zscan10Q3URR7 782 aa19.54■□□□□ 0.72
Col17a1-202ENSMUST00000086923 ClasrpQ8CFC7 668 aa19.54■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Jakmip2D3YXK0 820 aa19.54■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Dync1i1O88485 628 aa19.54■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Nf2P46662 596 aa19.54■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Cplx2P84086 134 aa19.54■□□□□ 0.72
Col17a1-202ENSMUST00000086923 4931400O07RikQ9D4M5 137 aa19.53■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Cnnm3Q32NY4 713 aa19.53■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Nectin2P32507 530 aa19.53■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Mnat1P51949 309 aa19.53■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Kif18aQ91WD7 886 aa19.53■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Slu7Q8BHJ9 585 aa19.52■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Iqca1Q9CUL5 857 aa19.52■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Evc2Q8K1G2 1220 aa19.52■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Ddx11Q6AXC6 880 aa19.52■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Adcy5P84309 1262 aa19.51■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Necab1Q8BG18 352 aa19.51■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Lamb3Q61087 1168 aa19.51■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Tceal9Q9DD24 104 aa19.51■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Q7TT23 1179 aa19.51■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Dnai2A2AC93 623 aa19.51■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Nutm1Q8BHP2 1126 aa19.51■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Maats1Q8BRC6 783 aa19.51■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Tfip11Q9ERA6 838 aaKnown RBP19.51■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Mcm2P97310 904 aa19.5■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Krt82Q99M74 516 aa19.5■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Dapk1Q80YE7 1442 aa19.5■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Gm45140A0A0N4SUM8 220 aa19.5■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Atp2b2Q9R0K7 1198 aa19.5■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Hap1O35668 628 aa19.5■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Cyp46a1Q9WVK8 500 aa19.5■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Nucb2P81117 420 aa19.49■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Pde1cQ64338 706 aa19.49■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Ankrd24Q80VM7 985 aa19.49■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Nup88Q8CEC0 753 aaKnown RBP19.49■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Ccdc39Q9D5Y1 937 aa19.49■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Zfp251Q6PCX8 632 aa19.49■□□□□ 0.71
Col17a1-202ENSMUST00000086923 CenpjQ569L8 1344 aa19.49■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Phldb2Q8K1N2 1249 aa19.49■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Grpel1Q99LP6 217 aa19.48■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 8.8 ms