RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Birc3O08863 600 aa13.31□□□□□ -0.28
Rnf40-201ENSMUST00000033088 Tnnt1O88346 262 aa13.31□□□□□ -0.28
Rnf40-201ENSMUST00000033088 Zscan10Q3URR7 782 aa13.31□□□□□ -0.28
Rnf40-201ENSMUST00000033088 Gm156Q58A37 223 aa13.3□□□□□ -0.28
Rnf40-201ENSMUST00000033088 Ush1cQ9ES64 910 aa13.3□□□□□ -0.28
Rnf40-201ENSMUST00000033088 Apaf1O88879 1249 aa13.3□□□□□ -0.28
Rnf40-201ENSMUST00000033088 Mical1Q8VDP3 1048 aa13.3□□□□□ -0.28
Rnf40-201ENSMUST00000033088 Trpm2Q91YD4 1506 aa13.29□□□□□ -0.28
Rnf40-201ENSMUST00000033088 Rprd2Q6NXI6 1469 aaKnown RBP13.29□□□□□ -0.28
Rnf40-201ENSMUST00000033088 Becn1O88597 448 aa13.29□□□□□ -0.28
Rnf40-201ENSMUST00000033088 Kif7B7ZNG0 1348 aa13.28□□□□□ -0.28
Rnf40-201ENSMUST00000033088 Camsap2Q8C1B1 1461 aa13.28□□□□□ -0.28
Rnf40-201ENSMUST00000033088 Ssh2Q5SW75 1423 aa13.28□□□□□ -0.28
Rnf40-201ENSMUST00000033088 Kif21bQ9QXL1 1668 aa13.28□□□□□ -0.28
Rnf40-201ENSMUST00000033088 Rabep1O35551 862 aa13.28□□□□□ -0.28
Rnf40-201ENSMUST00000033088 Vgll3P85442 326 aa13.28□□□□□ -0.28
Rnf40-201ENSMUST00000033088 Rsph3aQ3UFY4 516 aa13.27□□□□□ -0.28
Rnf40-201ENSMUST00000033088 Zfyve16Q80U44 1528 aa13.27□□□□□ -0.28
Rnf40-201ENSMUST00000033088 Dhx9O70133 1380 aaKnown RBP13.27□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Pik3c2gO70167 1506 aa13.27□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Podxl2Q8CAE9 603 aa13.27□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Lemd3Q9WU40 921 aa13.27□□□□□ -0.29
Rnf40-201ENSMUST00000033088 PogkQ80TC5 607 aa13.26□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Ylpm1Q9R0I7 1386 aaKnown RBP13.26□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Trim30aP15533 496 aa13.26□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Gtf2e1Q9D0D5 440 aa13.26□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Spag9Q58A65 1321 aaKnown RBP13.26□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Phactr2B1AVP0 632 aa13.26□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Aplp1Q03157 653 aa13.25□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Kidins220E9Q9B7 1793 aa13.25□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Cdc42bpbQ7TT50 1713 aa13.25□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Frmd3Q8BHD4 595 aa13.25□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Tsen2Q6P7W5 460 aa13.25□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Cog6Q8R3I3 657 aa13.25□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Tfip11Q9ERA6 838 aaKnown RBP13.24□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Nek4Q9Z1J2 792 aa13.24□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Atxn3Q9CVD2 355 aa13.24□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Plcd3Q8K2J0 785 aa13.24□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Supt6hQ62383 1726 aaKnown RBP13.24□□□□□ -0.29
Rnf40-201ENSMUST00000033088 DroshaQ5HZJ0 1373 aaKnown RBP13.24□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Mcm4P49717 862 aa13.23□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Map3k5O35099 1380 aa13.23□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Adgrl3Q80TS3 1537 aa13.23□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Utp3Q9JI13 469 aaKnown RBP13.22□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Clstn1Q9EPL2 979 aa13.22□□□□□ -0.29
Rnf40-201ENSMUST00000033088 PtprgQ05909 1442 aa13.22□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Sptbn5F6UCX4 1208 aa13.21□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Il4rP16382 810 aa13.21□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Nkx1-2P42580 305 aa13.21□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Cbx1P83917 185 aaKnown RBP13.21□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Phf14Q9D4H9 881 aa13.21□□□□□ -0.29
Rnf40-201ENSMUST00000033088 Zhx1P70121 873 aa13.21□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Trim58Q5NCC9 485 aa13.21□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Sytl4Q9R0Q1 673 aa13.21□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Abca9Q8K449 1623 aa13.21□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Fam184bQ0KK56 942 aa13.2□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Triml2E9PW10 424 aa13.2□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Ak9G3UYQ4 1894 aa13.2□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Pprc1Q6NZN1 1644 aa13.19□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Casq1O09165 405 aa13.19□□□□□ -0.3
Rnf40-201ENSMUST00000033088 IqubQ8CDK3 788 aa13.19□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Ppp2r3aB2RXC8 1150 aa13.19□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Ccar1Q8CH18 1146 aaKnown RBP13.19□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Cd109Q8R422 1442 aa13.18□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Ppp2r1aQ76MZ3 589 aa13.18□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Pde4cQ3UEI1 686 aa13.18□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Erbb3Q61526 1339 aa13.18□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Serpina10Q8R121 448 aa13.17□□□□□ -0.3
Rnf40-201ENSMUST00000033088 FosbP13346 338 aa13.17□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Zfp91Q62511 572 aa13.17□□□□□ -0.3
Rnf40-201ENSMUST00000033088 OvosQ3UU35 1456 aa13.16□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Q9D2X8 372 aa13.16□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Ppp1r9bQ6R891 817 aaKnown RBP13.16□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Brpf1B2RRD7 1212 aa13.15□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Cpa2Q504N0 417 aa13.15□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Rbm27Q5SFM8 1060 aaKnown RBP13.15□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Catsper2A2ARP9 588 aa13.15□□□□□ -0.3
Rnf40-201ENSMUST00000033088 G3bp1P97855 465 aaKnown RBP13.15□□□□□ -0.3
Rnf40-201ENSMUST00000033088 Nsd2Q8BVE8 1365 aa13.14□□□□□ -0.31
Rnf40-201ENSMUST00000033088 Nos1Q9Z0J4 1429 aa13.14□□□□□ -0.31
Rnf40-201ENSMUST00000033088 Kif3bQ61771 747 aa13.14□□□□□ -0.31
Rnf40-201ENSMUST00000033088 Smc5Q8CG46 1101 aaKnown RBP13.14□□□□□ -0.31
Rnf40-201ENSMUST00000033088 GsdmaQ9EST1 446 aa13.14□□□□□ -0.31
Rnf40-201ENSMUST00000033088 Asxl1P59598 1514 aa13.14□□□□□ -0.31
Rnf40-201ENSMUST00000033088 Gas2l2Q5SSG4 860 aa13.14□□□□□ -0.31
Rnf40-201ENSMUST00000033088 Rassf8Q8CJ96 419 aa13.14□□□□□ -0.31
Rnf40-201ENSMUST00000033088 Usp54Q8BL06 1588 aaKnown RBP13.14□□□□□ -0.31
Rnf40-201ENSMUST00000033088 Abca17E9PX95 1733 aa13.13□□□□□ -0.31
Rnf40-201ENSMUST00000033088 Kif1bQ60575 1816 aaKnown RBP13.13□□□□□ -0.31
Rnf40-201ENSMUST00000033088 Syce3B5KM66 88 aa13.13□□□□□ -0.31
Rnf40-201ENSMUST00000033088 Pnmal2G3X9N3 661 aa13.12□□□□□ -0.31
Rnf40-201ENSMUST00000033088 Dusp27Q148W8 1138 aa13.12□□□□□ -0.31
Rnf40-201ENSMUST00000033088 Atp2b2Q9R0K7 1198 aa13.12□□□□□ -0.31
Rnf40-201ENSMUST00000033088 Kif14L0N7N1 1674 aaKnown RBP13.12□□□□□ -0.31
Rnf40-201ENSMUST00000033088 Myom3A2ABU4 1439 aa13.12□□□□□ -0.31
Rnf40-201ENSMUST00000033088 Atp7aQ64430 1491 aa13.12□□□□□ -0.31
Rnf40-201ENSMUST00000033088 Tpd52l1O54818 204 aa13.12□□□□□ -0.31
Rnf40-201ENSMUST00000033088 Dixdc1Q80Y83 711 aa13.12□□□□□ -0.31
Rnf40-201ENSMUST00000033088 Ppp1r18Q8BQ30 594 aa13.12□□□□□ -0.31
Rnf40-201ENSMUST00000033088 Sf3a1Q8K4Z5 791 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 130.9 ms