RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Itsn2Q9Z0R6 1659 aa21.04■□□□□ 0.96
Trim8-201ENSMUST00000026008 Gtf3c3Q3TMP1 882 aa21.04■□□□□ 0.96
Trim8-201ENSMUST00000026008 P2rx7Q9Z1M0 595 aa21.04■□□□□ 0.96
Trim8-201ENSMUST00000026008 Kiaa1210E9Q0C6 1637 aa21.04■□□□□ 0.96
Trim8-201ENSMUST00000026008 Mre11Q61216 706 aa21.04■□□□□ 0.96
Trim8-201ENSMUST00000026008 Ksr2Q3UVC0 959 aa21.04■□□□□ 0.96
Trim8-201ENSMUST00000026008 U2af1Q9D883 239 aaKnown RBP21.03■□□□□ 0.96
Trim8-201ENSMUST00000026008 Ccdc183A2AJB1 534 aa21.03■□□□□ 0.96
Trim8-201ENSMUST00000026008 Rlbp1Q9Z275 317 aa21.03■□□□□ 0.96
Trim8-201ENSMUST00000026008 Abca17E9PX95 1733 aa21.02■□□□□ 0.96
Trim8-201ENSMUST00000026008 Nphp4P59240 1425 aa21.02■□□□□ 0.96
Trim8-201ENSMUST00000026008 Trim58Q5NCC9 485 aa21.02■□□□□ 0.96
Trim8-201ENSMUST00000026008 Atp1b4Q99ME6 356 aa21.01■□□□□ 0.95
Trim8-201ENSMUST00000026008 Duxf3A0A0N4SV92 674 aa21.01■□□□□ 0.95
Trim8-201ENSMUST00000026008 Stk26Q99JT2 416 aa21.01■□□□□ 0.95
Trim8-201ENSMUST00000026008 Abca6Q8K441 1624 aa21■□□□□ 0.95
Trim8-201ENSMUST00000026008 Zfyve16Q80U44 1528 aa21■□□□□ 0.95
Trim8-201ENSMUST00000026008 Myo5cE9Q1F5 1742 aa21■□□□□ 0.95
Trim8-201ENSMUST00000026008 Zranb1Q7M760 708 aa21■□□□□ 0.95
Trim8-201ENSMUST00000026008 Nos1Q9Z0J4 1429 aa20.99■□□□□ 0.95
Trim8-201ENSMUST00000026008 KarsQ99MN1 595 aaKnown RBP20.99■□□□□ 0.95
Trim8-201ENSMUST00000026008 IqubQ8CDK3 788 aa20.98■□□□□ 0.95
Trim8-201ENSMUST00000026008 Gm6268A2A3U9 297 aa20.98■□□□□ 0.95
Trim8-201ENSMUST00000026008 Tsen2Q6P7W5 460 aa20.98■□□□□ 0.95
Trim8-201ENSMUST00000026008 Map4k4P97820 1233 aaKnown RBP20.97■□□□□ 0.95
Trim8-201ENSMUST00000026008 Cluap1Q8R3P7 413 aa20.97■□□□□ 0.95
Trim8-201ENSMUST00000026008 Cald1E9QA15 768 aaKnown RBP20.97■□□□□ 0.95
Trim8-201ENSMUST00000026008 Exosc9Q9JHI7 438 aaKnown RBP20.96■□□□□ 0.95
Trim8-201ENSMUST00000026008 Gm156Q58A37 223 aa20.95■□□□□ 0.94
Trim8-201ENSMUST00000026008 IbtkQ6ZPR6 1352 aaKnown RBP20.95■□□□□ 0.94
Trim8-201ENSMUST00000026008 Gprasp1Q5U4C1 1347 aa20.95■□□□□ 0.94
Trim8-201ENSMUST00000026008 Cep152A2AUM9 1736 aaKnown RBP20.95■□□□□ 0.94
Trim8-201ENSMUST00000026008 Ptch1Q61115 1434 aa20.94■□□□□ 0.94
Trim8-201ENSMUST00000026008 Iqgap3F8VQ29 1632 aa20.94■□□□□ 0.94
Trim8-201ENSMUST00000026008 AU022751B1B0V2 589 aa20.93■□□□□ 0.94
Trim8-201ENSMUST00000026008 Ppp1r3fQ9JIG4 799 aa20.93■□□□□ 0.94
Trim8-201ENSMUST00000026008 Rims1Q99NE5 1463 aa20.93■□□□□ 0.94
Trim8-201ENSMUST00000026008 Abca9Q8K449 1623 aa20.93■□□□□ 0.94
Trim8-201ENSMUST00000026008 Znf518aB2RRF6 1478 aaKnown RBP20.92■□□□□ 0.94
Trim8-201ENSMUST00000026008 Znf330Q922H9 316 aa20.91■□□□□ 0.94
Trim8-201ENSMUST00000026008 Zmym3Q9JLM4 1370 aa20.9■□□□□ 0.94
Trim8-201ENSMUST00000026008 Pnmal2G3X9N3 661 aa20.9■□□□□ 0.94
Trim8-201ENSMUST00000026008 Scaf11E9PZM7 1456 aaKnown RBP20.9■□□□□ 0.94
Trim8-201ENSMUST00000026008 Fndc1E9Q043 1732 aa20.9■□□□□ 0.94
Trim8-201ENSMUST00000026008 Cdk5rap2Q8K389 1822 aa20.89■□□□□ 0.94
Trim8-201ENSMUST00000026008 Ppp1r9bQ6R891 817 aaKnown RBP20.89■□□□□ 0.93
Trim8-201ENSMUST00000026008 Znf521Q6KAS7 1311 aa20.89■□□□□ 0.93
Trim8-201ENSMUST00000026008 Plcd4Q8K3R3 807 aa20.89■□□□□ 0.93
Trim8-201ENSMUST00000026008 Myom1Q62234 1667 aaKnown RBP20.88■□□□□ 0.93
Trim8-201ENSMUST00000026008 Talpid3E9PV87 1520 aa20.88■□□□□ 0.93
Trim8-201ENSMUST00000026008 Dusp27Q148W8 1138 aa20.87■□□□□ 0.93
Trim8-201ENSMUST00000026008 CenpjQ569L8 1344 aa20.87■□□□□ 0.93
Trim8-201ENSMUST00000026008 Ccar1Q8CH18 1146 aaKnown RBP20.87■□□□□ 0.93
Trim8-201ENSMUST00000026008 OvosQ3UU35 1456 aa20.86■□□□□ 0.93
Trim8-201ENSMUST00000026008 Ppp2r3aB2RXC8 1150 aa20.86■□□□□ 0.93
Trim8-201ENSMUST00000026008 Spryd3E9Q9B3 442 aa20.85■□□□□ 0.93
Trim8-201ENSMUST00000026008 Efcab6Q6P1E8 1516 aa20.85■□□□□ 0.93
Trim8-201ENSMUST00000026008 Abca8aQ8K442 1620 aa20.85■□□□□ 0.93
Trim8-201ENSMUST00000026008 Ppp1r18Q8BQ30 594 aa20.85■□□□□ 0.93
Trim8-201ENSMUST00000026008 Senp3Q9EP97 568 aaKnown RBP20.85■□□□□ 0.93
Trim8-201ENSMUST00000026008 Prex1Q69ZK0 1650 aa20.84■□□□□ 0.93
Trim8-201ENSMUST00000026008 Myom2Q14BI5 1463 aa20.83■□□□□ 0.93
Trim8-201ENSMUST00000026008 Adgrb3Q80ZF8 1522 aa20.83■□□□□ 0.93
Trim8-201ENSMUST00000026008 Tmem131lQ3U3D7 1597 aa20.83■□□□□ 0.92
Trim8-201ENSMUST00000026008 Tnpo1Q8BFY9 898 aaKnown RBP20.82■□□□□ 0.92
Trim8-201ENSMUST00000026008 PalldQ9ET54 1408 aa20.81■□□□□ 0.92
Trim8-201ENSMUST00000026008 Lrrc7Q80TE7 1490 aa20.81■□□□□ 0.92
Trim8-201ENSMUST00000026008 InsrP15208 1372 aa20.81■□□□□ 0.92
Trim8-201ENSMUST00000026008 Mfap1aC0HKD8 439 aaKnown RBP20.81■□□□□ 0.92
Trim8-201ENSMUST00000026008 Mfap1bC0HKD9 439 aaKnown RBP20.81■□□□□ 0.92
Trim8-201ENSMUST00000026008 Shq1Q7TMX5 569 aa20.8■□□□□ 0.92
Trim8-201ENSMUST00000026008 Plppr3Q7TPB0 716 aa20.8■□□□□ 0.92
Trim8-201ENSMUST00000026008 Nutm1Q8BHP2 1126 aa20.8■□□□□ 0.92
Trim8-201ENSMUST00000026008 Uggt1Q6P5E4 1551 aa20.79■□□□□ 0.92
Trim8-201ENSMUST00000026008 Gli2Q0VGT2 1544 aa20.79■□□□□ 0.92
Trim8-201ENSMUST00000026008 Ccdc60Q8C4J0 545 aa20.78■□□□□ 0.92
Trim8-201ENSMUST00000026008 Fam135bQ9DAI6 1403 aa20.78■□□□□ 0.92
Trim8-201ENSMUST00000026008 Iqsec2Q5DU25 1478 aa20.78■□□□□ 0.92
Trim8-201ENSMUST00000026008 Sptbn5F6UCX4 1208 aa20.77■□□□□ 0.92
Trim8-201ENSMUST00000026008 Tmc1Q8R4P5 757 aa20.77■□□□□ 0.92
Trim8-201ENSMUST00000026008 DnmbpQ6TXD4 1580 aa20.76■□□□□ 0.91
Trim8-201ENSMUST00000026008 Ehbp1l1Q99MS7 1716 aa20.76■□□□□ 0.91
Trim8-201ENSMUST00000026008 Htatsf1Q8BGC0 757 aa20.75■□□□□ 0.91
Trim8-201ENSMUST00000026008 Skint5A7XUY5 1461 aa20.75■□□□□ 0.91
Trim8-201ENSMUST00000026008 AU019823E9PUQ3 292 aa20.75■□□□□ 0.91
Trim8-201ENSMUST00000026008 Slc52a2Q9D8F3 450 aa20.74■□□□□ 0.91
Trim8-201ENSMUST00000026008 Nectin2P32507 530 aa20.74■□□□□ 0.91
Trim8-201ENSMUST00000026008 Tmco5bQ80X59 307 aa20.74■□□□□ 0.91
Trim8-201ENSMUST00000026008 Maco1Q7TQE6 664 aaKnown RBP20.73■□□□□ 0.91
Trim8-201ENSMUST00000026008 Rbm25B2RY56 838 aaKnown RBP20.72■□□□□ 0.91
Trim8-201ENSMUST00000026008 KdrP35918 1367 aa20.72■□□□□ 0.91
Trim8-201ENSMUST00000026008 Rabep1O35551 862 aa20.72■□□□□ 0.91
Trim8-201ENSMUST00000026008 CastP51125 788 aa20.71■□□□□ 0.91
Trim8-201ENSMUST00000026008 Atl3Q91YH5 541 aa20.71■□□□□ 0.91
Trim8-201ENSMUST00000026008 Q9D9H8 365 aa20.71■□□□□ 0.91
Trim8-201ENSMUST00000026008 Yeats2Q3TUF7 1407 aa20.71■□□□□ 0.91
Trim8-201ENSMUST00000026008 Depdc5P61460 1591 aa20.71■□□□□ 0.91
Trim8-201ENSMUST00000026008 Utp14aQ640M1 767 aaKnown RBP20.7■□□□□ 0.9
Trim8-201ENSMUST00000026008 Tbc1d32Q3URV1 1296 aa20.69■□□□□ 0.9
Trim8-201ENSMUST00000026008 Afap1Q80YS6 731 aa20.68■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 34.9 ms