RNA–Protein interactions for RNA: YPR032W

SRO7, Transcript of Effector of Rab GTPase Sec4p, yeastyeast

Gene SRO7, Length 3,102 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRO7YPR032W SPG1P50088 95 aa2.87□□□□□ -1.95
SRO7YPR032W TSC3Q3E790 80 aa2.87□□□□□ -1.95
SRO7YPR032W YPR010C-AA5Z2X5 72 aa2.86□□□□□ -1.95
SRO7YPR032W HOT13P36078 116 aa2.85□□□□□ -1.95
SRO7YPR032W YDL241WQ07738 123 aa2.85□□□□□ -1.95
SRO7YPR032W YER135CP40082 130 aa2.85□□□□□ -1.95
SRO7YPR032W PMP3P87284 55 aa2.85□□□□□ -1.95
SRO7YPR032W RPS11AP0CX47 156 aaKnown RBP2.84□□□□□ -1.95
SRO7YPR032W RPS11BP0CX48 156 aaKnown RBP2.84□□□□□ -1.95
SRO7YPR032W EDC2P40023 145 aaPredicted RBP2.84□□□□□ -1.95
SRO7YPR032W LIP1Q03579 150 aa2.84□□□□□ -1.95
SRO7YPR032W MRPS8Q03799 155 aa2.84□□□□□ -1.95
SRO7YPR032W YNL162W-AQ3E7A8 72 aa2.84□□□□□ -1.95
SRO7YPR032W FYV5P25585 152 aa2.83□□□□□ -1.96
SRO7YPR032W RTG1P32607 177 aa2.82□□□□□ -1.96
SRO7YPR032W FAB1P34756 2278 aa2.82□□□□□ -1.96
SRO7YPR032W YCL048W-AQ2V2Q2 79 aa2.82□□□□□ -1.96
SRO7YPR032W YOR011W-AQ3E807 68 aa2.82□□□□□ -1.96
SRO7YPR032W HUB1Q6Q546 73 aa2.82□□□□□ -1.96
SRO7YPR032W YOL013W-AP0C272 63 aaPredicted RBP2.82□□□□□ -1.96
SRO7YPR032W YCR043CP25361 127 aa2.82□□□□□ -1.96
SRO7YPR032W YHR213W-BQ8TGK1 99 aa2.81□□□□□ -1.96
SRO7YPR032W VPS13Q07878 3144 aa2.81□□□□□ -1.96
SRO7YPR032W RPB10P22139 70 aa2.8□□□□□ -1.96
SRO7YPR032W RDS3Q06835 107 aaPredicted RBP2.8□□□□□ -1.96
SRO7YPR032W YLR307C-AQ3E825 87 aa2.8□□□□□ -1.96
SRO7YPR032W YAL064WP39711 94 aa2.8□□□□□ -1.96
SRO7YPR032W YGL149WP53116 101 aa2.8□□□□□ -1.96
SRO7YPR032W TMC1Q08422 150 aaPredicted RBP2.8□□□□□ -1.96
SRO7YPR032W MVB12P42939 101 aa2.79□□□□□ -1.96
SRO7YPR032W YBR230W-AQ3E762 66 aa2.79□□□□□ -1.96
SRO7YPR032W IRA2P19158 3079 aa2.79□□□□□ -1.96
SRO7YPR032W YIL156W-BQ2V2P4 73 aa2.79□□□□□ -1.96
SRO7YPR032W HOR7Q05827 59 aa2.79□□□□□ -1.96
SRO7YPR032W ECM19Q06011 112 aa2.79□□□□□ -1.96
SRO7YPR032W YJL133C-AQ3E7A3 74 aa2.79□□□□□ -1.96
SRO7YPR032W TRA1P38811 3744 aa2.79□□□□□ -1.96
SRO7YPR032W YCR001WP25347 104 aa2.78□□□□□ -1.96
SRO7YPR032W YNL042W-BQ3E7Z2 85 aa2.78□□□□□ -1.96
SRO7YPR032W YGL015CP33199 130 aa2.78□□□□□ -1.96
SRO7YPR032W YHR125WP38831 101 aa2.77□□□□□ -1.97
SRO7YPR032W YIL102CP40488 101 aa2.77□□□□□ -1.97
SRO7YPR032W COX17Q12287 69 aa2.77□□□□□ -1.97
SRO7YPR032W YER145C-AA0A023PYF4 145 aa2.77□□□□□ -1.97
SRO7YPR032W YCR095W-AQ3E787 52 aa2.77□□□□□ -1.97
SRO7YPR032W SDH6Q3E785 79 aa2.77□□□□□ -1.97
SRO7YPR032W YMR001C-AQ8TGS9 76 aa2.77□□□□□ -1.97
SRO7YPR032W CSF1Q12150 2958 aa2.76□□□□□ -1.97
SRO7YPR032W RPC10P40422 70 aa2.76□□□□□ -1.97
SRO7YPR032W YDR010CQ12426 110 aa2.76□□□□□ -1.97
SRO7YPR032W TAR1Q8TGM6 124 aa2.76□□□□□ -1.97
SRO7YPR032W YBL039W-BP0C268 59 aa2.76□□□□□ -1.97
SRO7YPR032W ATP17Q06405 101 aa2.76□□□□□ -1.97
SRO7YPR032W YAR023CD6VPM8 179 aa2.75□□□□□ -1.97
SRO7YPR032W AQY2P0CD90 149 aa2.75□□□□□ -1.97
SRO7YPR032W IGD1P43598 195 aa2.75□□□□□ -1.97
SRO7YPR032W MRX7P53869 86 aa2.75□□□□□ -1.97
SRO7YPR032W YJL127C-BQ3E828 52 aa2.75□□□□□ -1.97
SRO7YPR032W YLR157W-DP0CE99 70 aa2.75□□□□□ -1.97
SRO7YPR032W SPC1P46965 94 aa2.75□□□□□ -1.97
SRO7YPR032W BPH1P25356 2167 aa2.74□□□□□ -1.97
SRO7YPR032W DDR48P18899 430 aaKnown RBP2.74□□□□□ -1.97
SRO7YPR032W YBR027CP38220 110 aa2.74□□□□□ -1.97
SRO7YPR032W YGR240C-AQ3E786 66 aa2.74□□□□□ -1.97
SRO7YPR032W QCR10P37299 77 aa2.73□□□□□ -1.97
SRO7YPR032W BSC4P53841 131 aa2.73□□□□□ -1.97
SRO7YPR032W YJL197C-AP0C5P0 93 aa2.73□□□□□ -1.97
SRO7YPR032W AUA1P32450 94 aa2.73□□□□□ -1.97
SRO7YPR032W DDR2P89113 61 aa2.72□□□□□ -1.97
SRO7YPR032W YBR182C-AQ8TGU6 64 aa2.71□□□□□ -1.98
SRO7YPR032W YAR064WP39563 99 aa2.71□□□□□ -1.98
SRO7YPR032W SOM1Q05676 74 aa2.69□□□□□ -1.98
SRO7YPR032W RPL33AP05744 107 aaKnown RBP2.68□□□□□ -1.98
SRO7YPR032W RPL33BP41056 107 aaKnown RBP2.68□□□□□ -1.98
SRO7YPR032W LCL2Q08045 131 aa2.68□□□□□ -1.98
SRO7YPR032W YFR032C-BQ8TGU2 87 aa2.67□□□□□ -1.98
SRO7YPR032W YNL122CP53921 115 aaPredicted RBP2.66□□□□□ -1.98
SRO7YPR032W YDR034W-BQ6Q5X2 51 aa2.66□□□□□ -1.98
SRO7YPR032W YDR115WQ04598 105 aa2.66□□□□□ -1.98
SRO7YPR032W FYV12Q08559 129 aa2.66□□□□□ -1.98
SRO7YPR032W YDL012CQ12489 107 aa2.65□□□□□ -1.98
SRO7YPR032W GIS2P53849 153 aaKnown RBP RIP-Chip data2.65□□□□□ -1.99not detected
SRO7YPR032W YOR072WQ08486 104 aa2.65□□□□□ -1.99
SRO7YPR032W MRP10O75012 95 aa2.64□□□□□ -1.99
SRO7YPR032W HFA1P32874 2273 aa2.63□□□□□ -1.99
SRO7YPR032W SNA2P56508 79 aa2.63□□□□□ -1.99
SRO7YPR032W YHR007C-AQ07074 71 aa2.63□□□□□ -1.99
SRO7YPR032W RTC6O14464 93 aa2.63□□□□□ -1.99
SRO7YPR032W YGL014C-AP0C5N1 53 aa2.62□□□□□ -1.99
SRO7YPR032W YLL066W-BQ8TGJ7 56 aa2.62□□□□□ -1.99
SRO7YPR032W Q0032Q9ZZX7 96 aa2.62□□□□□ -1.99
SRO7YPR032W YLR255CO13574 117 aa2.61□□□□□ -1.99
SRO7YPR032W YBL008W-AQ3E821 79 aa2.61□□□□□ -1.99
SRO7YPR032W YHR212W-AP0CX91 67 aa2.57□□□□□ -2
SRO7YPR032W YGR146C-AQ8TGT9 53 aa2.57□□□□□ -2
SRO7YPR032W YDR210WQ03482 75 aa2.56□□□□□ -2
SRO7YPR032W YOL097W-AQ3E7Y9 61 aa2.56□□□□□ -2
SRO7YPR032W YCR041WP37265 110 aa2.56□□□□□ -2
SRO7YPR032W YJR128WP47162 119 aa2.56□□□□□ -2
SRO7YPR032W YGL041C-BQ3E750 60 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 86 ms