RNA–Protein interactions for RNA: YPL234C

VMA11, Transcript of Vacuolar ATPase V0 domain subunit c', yeastyeast

Gene VMA11, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA11YPL234C YFR009W-AP0C5M9 85 aa5.96□□□□□ -1.46
VMA11YPL234C RSM19P53733 91 aaPredicted RBP5.96□□□□□ -1.46
VMA11YPL234C SHH4Q06236 168 aa5.96□□□□□ -1.46
VMA11YPL234C YDR119W-AQ2V2P9 66 aa5.96□□□□□ -1.46
VMA11YPL234C YGL041C-BQ3E750 60 aa5.96□□□□□ -1.46
VMA11YPL234C YLR307C-AQ3E825 87 aa5.96□□□□□ -1.46
VMA11YPL234C YSY6P38374 65 aa5.95□□□□□ -1.46
VMA11YPL234C YNL042W-BQ3E7Z2 85 aa5.95□□□□□ -1.46
VMA11YPL234C GAT4P40569 121 aa5.94□□□□□ -1.46
VMA11YPL234C YDR029WQ12111 104 aa5.94□□□□□ -1.46
VMA11YPL234C ECM12O13529 151 aa5.93□□□□□ -1.46
VMA11YPL234C TDA2P40045 126 aa5.93□□□□□ -1.46
VMA11YPL234C RPL38P49167 78 aaKnown RBP5.93□□□□□ -1.46
VMA11YPL234C EDC1P53080 175 aaPredicted RBP5.93□□□□□ -1.46
VMA11YPL234C YLR285C-AQ3E771 56 aa5.93□□□□□ -1.46
VMA11YPL234C YOR304C-AO14468 76 aa5.92□□□□□ -1.46
VMA11YPL234C BET1P22804 142 aa5.92□□□□□ -1.46
VMA11YPL234C YBL112CQ3E7Y4 105 aa5.91□□□□□ -1.46
VMA11YPL234C YHL018WP38744 120 aaPredicted RBP5.89□□□□□ -1.47
VMA11YPL234C YPL038W-AQ3E7B4 63 aa5.89□□□□□ -1.47
VMA11YPL234C YLR156WP0CE96 114 aa5.88□□□□□ -1.47
VMA11YPL234C YLR159WP0CE97 114 aa5.88□□□□□ -1.47
VMA11YPL234C YLR161WP0CE98 114 aa5.88□□□□□ -1.47
VMA11YPL234C PEX22P39718 180 aa5.88□□□□□ -1.47
VMA11YPL234C ICS3P47034 131 aa5.88□□□□□ -1.47
VMA11YPL234C SPT4P32914 102 aaPredicted RBP5.87□□□□□ -1.47
VMA11YPL234C YGL193CP53097 103 aa5.86□□□□□ -1.47
VMA11YPL234C YER039C-AP0CD97 72 aa5.85□□□□□ -1.47
VMA11YPL234C COX23P38824 151 aa5.85□□□□□ -1.47
VMA11YPL234C RSM18P40033 138 aa5.85□□□□□ -1.47
VMA11YPL234C DDR2P89113 61 aa5.85□□□□□ -1.47
VMA11YPL234C EDC2P40023 145 aaPredicted RBP5.84□□□□□ -1.47
VMA11YPL234C ATP20Q12233 115 aa5.84□□□□□ -1.47
VMA11YPL234C YHR213W-BQ8TGK1 99 aa5.84□□□□□ -1.47
VMA11YPL234C RPL36BO14455 100 aaKnown RBP5.83□□□□□ -1.48
VMA11YPL234C YDR034C-AP0C289 58 aa5.82□□□□□ -1.48
VMA11YPL234C BSC4P53841 131 aa5.82□□□□□ -1.48
VMA11YPL234C YKL183C-AQ3E765 70 aa5.82□□□□□ -1.48
VMA11YPL234C YJL133C-AQ3E7A3 74 aa5.82□□□□□ -1.48
VMA11YPL234C MRP10O75012 95 aa5.81□□□□□ -1.48
VMA11YPL234C TOM6P33448 61 aa5.81□□□□□ -1.48
VMA11YPL234C YHR007C-AQ07074 71 aa5.81□□□□□ -1.48
VMA11YPL234C YOR072WQ08486 104 aa5.81□□□□□ -1.48
VMA11YPL234C YOL014WQ08110 124 aa5.78□□□□□ -1.48
VMA11YPL234C YPL080CQ02826 108 aa5.77□□□□□ -1.49
VMA11YPL234C YPR195CQ06594 109 aa5.77□□□□□ -1.49
VMA11YPL234C TDA8Q6B2U8 126 aa5.77□□□□□ -1.49
VMA11YPL234C ECM19Q06011 112 aa5.76□□□□□ -1.49
VMA11YPL234C YOR314WQ12506 109 aa5.76□□□□□ -1.49
VMA11YPL234C YIR021W-AQ3E739 70 aa5.76□□□□□ -1.49
VMA11YPL234C GIS2P53849 153 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
VMA11YPL234C MDN1Q12019 4910 aaKnown RBP5.73□□□□□ -1.49
VMA11YPL234C YCR050CP25630 102 aa5.73□□□□□ -1.49
VMA11YPL234C YER187WP40102 141 aa5.73□□□□□ -1.49
VMA11YPL234C AIM4P38305 123 aaPredicted RBP5.72□□□□□ -1.49
VMA11YPL234C YLR162WQ06235 118 aa5.71□□□□□ -1.5
VMA11YPL234C YBR182C-AQ8TGU6 64 aa5.71□□□□□ -1.5
VMA11YPL234C MIC10Q96VH5 97 aa5.71□□□□□ -1.5
VMA11YPL234C YDR246W-AQ3E763 66 aa5.7□□□□□ -1.5
VMA11YPL234C YGR121W-AQ3E816 71 aa5.7□□□□□ -1.5
VMA11YPL234C YEL045CP32616 141 aa5.69□□□□□ -1.5
VMA11YPL234C NOP10Q6Q547 58 aaPredicted RBP5.67□□□□□ -1.5
VMA11YPL234C YLR415CO13578 112 aa5.66□□□□□ -1.5
VMA11YPL234C SPG1P50088 95 aa5.66□□□□□ -1.5
VMA11YPL234C YMR230W-AQ3E7B5 62 aa5.66□□□□□ -1.5
VMA11YPL234C HOT13P36078 116 aa5.65□□□□□ -1.5
VMA11YPL234C YIL102CP40488 101 aa5.64□□□□□ -1.51
VMA11YPL234C YJL197C-AP0C5P0 93 aa5.63□□□□□ -1.51
VMA11YPL234C YJR085CP47131 105 aaKnown RBP5.62□□□□□ -1.51
VMA11YPL234C LCL1Q02786 101 aa5.62□□□□□ -1.51
VMA11YPL234C LCL2Q08045 131 aa5.62□□□□□ -1.51
VMA11YPL234C YKL069WP36088 180 aa5.61□□□□□ -1.51
VMA11YPL234C YDR182W-AQ3E796 67 aa5.61□□□□□ -1.51
VMA11YPL234C RPL36AP05745 100 aaPredicted RBP5.6□□□□□ -1.51
VMA11YPL234C YLR157W-DP0CE99 70 aa5.59□□□□□ -1.51
VMA11YPL234C YBR027CP38220 110 aa5.59□□□□□ -1.51
VMA11YPL234C YAR064WP39563 99 aa5.59□□□□□ -1.51
VMA11YPL234C LIP1Q03579 150 aa5.59□□□□□ -1.51
VMA11YPL234C MMS2P53152 137 aa5.58□□□□□ -1.52
VMA11YPL234C YCR043CP25361 127 aa5.57□□□□□ -1.52
VMA11YPL234C YOL166W-AQ8TGJ1 51 aa5.57□□□□□ -1.52
VMA11YPL234C YOL097W-AQ3E7Y9 61 aa5.56□□□□□ -1.52
VMA11YPL234C YOL013W-AP0C272 63 aaPredicted RBP5.53□□□□□ -1.52
VMA11YPL234C YOR268CQ08734 132 aa5.52□□□□□ -1.53
VMA11YPL234C YLR361C-AQ3E795 98 aa5.52□□□□□ -1.53
VMA11YPL234C YHL005CP38752 130 aa5.5□□□□□ -1.53
VMA11YPL234C YPR153WQ06537 140 aa5.49□□□□□ -1.53
VMA11YPL234C RPS30AP0CX33 63 aaKnown RBP5.48□□□□□ -1.53
VMA11YPL234C RPS30BP0CX34 63 aaKnown RBP5.48□□□□□ -1.53
VMA11YPL234C YGL149WP53116 101 aa5.47□□□□□ -1.53
VMA11YPL234C YDL012CQ12489 107 aa5.45□□□□□ -1.54
VMA11YPL234C SBH1P52870 82 aa5.44□□□□□ -1.54
VMA11YPL234C DDR48P18899 430 aaKnown RBP5.4□□□□□ -1.54
VMA11YPL234C YHR125WP38831 101 aa5.4□□□□□ -1.54
VMA11YPL234C HHF1P02309 103 aaKnown RBP5.39□□□□□ -1.55
VMA11YPL234C SDH6Q3E785 79 aa5.38□□□□□ -1.55
VMA11YPL234C YHR073W-AP0C5N7 58 aa5.37□□□□□ -1.55
VMA11YPL234C KSH1Q8TGJ3 72 aa5.36□□□□□ -1.55
VMA11YPL234C YOR381W-AQ3E804 55 aa5.34□□□□□ -1.55
VMA11YPL234C KTI11Q3E840 82 aa5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms