RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W YLR363W-AQ3E747 85 aa1.15□□□□□ -2.22
VPS16YPL045W YOL013W-AP0C272 63 aaPredicted RBP1.15□□□□□ -2.23
VPS16YPL045W PAU1P0CE88 120 aa1.15□□□□□ -2.23
VPS16YPL045W PAU14P0CE89 120 aa1.15□□□□□ -2.23
VPS16YPL045W PAU6P0CE90 120 aa1.15□□□□□ -2.23
VPS16YPL045W PAU18P0CE91 120 aa1.15□□□□□ -2.23
VPS16YPL045W PAU8P0CE92 120 aa1.15□□□□□ -2.23
VPS16YPL045W PAU11P0CE93 120 aa1.15□□□□□ -2.23
VPS16YPL045W YCR001WP25347 104 aa1.15□□□□□ -2.23
VPS16YPL045W PAU16P35994 123 aa1.15□□□□□ -2.23
VPS16YPL045W LSM2P38203 95 aaKnown RBP1.15□□□□□ -2.23
VPS16YPL045W YBR013CP38215 129 aa1.15□□□□□ -2.23
VPS16YPL045W PAU13P38725 120 aa1.15□□□□□ -2.23
VPS16YPL045W YHR173CP38864 112 aa1.15□□□□□ -2.23
VPS16YPL045W PAU15P40585 124 aa1.15□□□□□ -2.23
VPS16YPL045W PAU10Q03050 120 aa1.15□□□□□ -2.23
VPS16YPL045W PAU20Q08322 120 aa1.15□□□□□ -2.23
VPS16YPL045W YPR145C-AQ2V2P0 78 aa1.15□□□□□ -2.23
VPS16YPL045W PAU9Q3E770 120 aa1.15□□□□□ -2.23
VPS16YPL045W SRB6P32570 121 aa1.14□□□□□ -2.23
VPS16YPL045W SNU13P39990 126 aaKnown RBP1.14□□□□□ -2.23
VPS16YPL045W YJL009WP47078 108 aa1.14□□□□□ -2.23
VPS16YPL045W ENV10Q99382 181 aa1.14□□□□□ -2.23
VPS16YPL045W YLR342W-AQ3E810 57 aa1.14□□□□□ -2.23
VPS16YPL045W RSM19P53733 91 aaPredicted RBP1.13□□□□□ -2.23
VPS16YPL045W YOR011W-AQ3E807 68 aa1.13□□□□□ -2.23
VPS16YPL045W RPS11AP0CX47 156 aaKnown RBP1.13□□□□□ -2.23
VPS16YPL045W RPS11BP0CX48 156 aaKnown RBP1.13□□□□□ -2.23
VPS16YPL045W TOM7P53507 60 aa1.13□□□□□ -2.23
VPS16YPL045W COX12Q01519 83 aa1.13□□□□□ -2.23
VPS16YPL045W YCR075W-AQ3E830 75 aa1.13□□□□□ -2.23
VPS16YPL045W AUA1P32450 94 aa1.12□□□□□ -2.23
VPS16YPL045W YGR025WP53216 100 aa1.12□□□□□ -2.23
VPS16YPL045W LSM6Q06406 86 aaKnown RBP1.12□□□□□ -2.23
VPS16YPL045W YOR105WQ08504 108 aa1.12□□□□□ -2.23
VPS16YPL045W RPS22BQ3E7Y3 130 aaKnown RBP1.12□□□□□ -2.23
VPS16YPL045W HMRA1P0CY11 126 aa1.12□□□□□ -2.23
VPS16YPL045W YOR072WQ08486 104 aa1.12□□□□□ -2.23
VPS16YPL045W YGL041C-BQ3E750 60 aa1.12□□□□□ -2.23
VPS16YPL045W YMR141CP40211 102 aa1.11□□□□□ -2.23
VPS16YPL045W MGR2Q02889 113 aa1.11□□□□□ -2.23
VPS16YPL045W LCL2Q08045 131 aa1.11□□□□□ -2.23
VPS16YPL045W MRPL31P14063 131 aaPredicted RBP1.11□□□□□ -2.23
VPS16YPL045W PAU7P39545 55 aa1.11□□□□□ -2.23
VPS16YPL045W HUA1P40325 198 aa1.11□□□□□ -2.23
VPS16YPL045W YIL102CP40488 101 aa1.11□□□□□ -2.23
VPS16YPL045W PAU5P43575 122 aa1.11□□□□□ -2.23
VPS16YPL045W ICS3P47034 131 aa1.11□□□□□ -2.23
VPS16YPL045W YGR240C-AQ3E786 66 aa1.11□□□□□ -2.23
VPS16YPL045W RRT15Q3E811 62 aa1.11□□□□□ -2.23
VPS16YPL045W MSL1P40567 111 aaPredicted RBP1.1□□□□□ -2.23
VPS16YPL045W MRPS12P53732 153 aa1.1□□□□□ -2.23
VPS16YPL045W SGF11Q03067 99 aa1.1□□□□□ -2.23
VPS16YPL045W YBR200W-AQ3E755 54 aa1.1□□□□□ -2.23
VPS16YPL045W YNR034W-AQ3E841 98 aa1.1□□□□□ -2.23
VPS16YPL045W MVB12P42939 101 aa1.09□□□□□ -2.23
VPS16YPL045W YDR029WQ12111 104 aa1.09□□□□□ -2.23
VPS16YPL045W SPC1P46965 94 aa1.08□□□□□ -2.24
VPS16YPL045W ERI1P62651 68 aaKnown RBP1.08□□□□□ -2.24
VPS16YPL045W PMP3P87284 55 aa1.08□□□□□ -2.24
VPS16YPL045W MDN1Q12019 4910 aaKnown RBP1.07□□□□□ -2.24
VPS16YPL045W YPR010C-AA5Z2X5 72 aa1.07□□□□□ -2.24
VPS16YPL045W HHY1P39982 102 aa1.07□□□□□ -2.24
VPS16YPL045W TOS6P48560 102 aa1.07□□□□□ -2.24
VPS16YPL045W LCL1Q02786 101 aa1.07□□□□□ -2.24
VPS16YPL045W YMR122W-AQ3E842 84 aa1.07□□□□□ -2.24
VPS16YPL045W YCR095W-AQ3E787 52 aa1.06□□□□□ -2.24
VPS16YPL045W YHL005CP38752 130 aa1.06□□□□□ -2.24
VPS16YPL045W YDR042CQ03205 200 aa1.06□□□□□ -2.24
VPS16YPL045W YLL066W-BQ8TGJ7 56 aa1.06□□□□□ -2.24
VPS16YPL045W YOR008C-AQ3E7B9 74 aa1.05□□□□□ -2.24
VPS16YPL045W YDR210WQ03482 75 aa1.05□□□□□ -2.24
VPS16YPL045W YLR255CO13574 117 aa1.04□□□□□ -2.24
VPS16YPL045W SSS1P35179 80 aa1.04□□□□□ -2.24
VPS16YPL045W RPC10P40422 70 aa1.04□□□□□ -2.24
VPS16YPL045W YHR213W-BQ8TGK1 99 aa1.04□□□□□ -2.24
VPS16YPL045W YMR175W-AQ3E766 64 aa1.04□□□□□ -2.24
VPS16YPL045W ECM12O13529 151 aa1.03□□□□□ -2.24
VPS16YPL045W SNA2P56508 79 aa1.03□□□□□ -2.24
VPS16YPL045W YPL038W-AQ3E7B4 63 aa1.03□□□□□ -2.24
VPS16YPL045W YIL134C-AQ45U18 67 aa1.03□□□□□ -2.24
VPS16YPL045W SHU1P38751 150 aa1.03□□□□□ -2.25
VPS16YPL045W RSM18P40033 138 aa1.03□□□□□ -2.25
VPS16YPL045W RPL37AP49166 88 aaKnown RBP1.03□□□□□ -2.25
VPS16YPL045W YAL065CO13511 128 aa1.02□□□□□ -2.25
VPS16YPL045W YJR128WP47162 119 aa1.02□□□□□ -2.25
VPS16YPL045W YDR034C-AP0C289 58 aa1.01□□□□□ -2.25
VPS16YPL045W ICY1Q04329 127 aa1.01□□□□□ -2.25
VPS16YPL045W RPL29P05747 59 aaPredicted RBP1□□□□□ -2.25
VPS16YPL045W YBL039W-BP0C268 59 aa1□□□□□ -2.25
VPS16YPL045W YDL022C-AP0C5L6 82 aa1□□□□□ -2.25
VPS16YPL045W YLL006W-AQ3E814 58 aa1□□□□□ -2.25
VPS16YPL045W YLR307C-AQ3E825 87 aa1□□□□□ -2.25
VPS16YPL045W CWP2P43497 92 aa1□□□□□ -2.25
VPS16YPL045W PAU23Q07987 124 aa1□□□□□ -2.25
VPS16YPL045W PAU17Q12370 124 aa1□□□□□ -2.25
VPS16YPL045W YKL023C-AQ2V2P3 75 aa1□□□□□ -2.25
VPS16YPL045W MRX7P53869 86 aa0.99□□□□□ -2.25
VPS16YPL045W AIM19P40502 157 aa0.98□□□□□ -2.25
VPS16YPL045W YNL190WP53872 204 aa0.98□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms