RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C PFY1P07274 126 aa6.93□□□□□ -1.3
SSN3YPL042C RPL42AP0CX27 106 aaKnown RBP6.93□□□□□ -1.3
SSN3YPL042C RPL42BP0CX28 106 aaKnown RBP6.93□□□□□ -1.3
SSN3YPL042C YOR314WQ12506 109 aa6.93□□□□□ -1.3
SSN3YPL042C YAL065CO13511 128 aa6.92□□□□□ -1.3
SSN3YPL042C YSY6P38374 65 aa6.92□□□□□ -1.3
SSN3YPL042C PPT2Q12036 173 aa6.92□□□□□ -1.3
SSN3YPL042C YPR053CQ6Q5F3 151 aa6.92□□□□□ -1.3
SSN3YPL042C RPS11AP0CX47 156 aaKnown RBP6.91□□□□□ -1.3
SSN3YPL042C RPS11BP0CX48 156 aaKnown RBP6.91□□□□□ -1.3
SSN3YPL042C YDL241WQ07738 123 aa6.91□□□□□ -1.3
SSN3YPL042C YDR246W-AQ3E763 66 aa6.91□□□□□ -1.3
SSN3YPL042C YIL014C-AQ02598 104 aa6.9□□□□□ -1.3
SSN3YPL042C MGR2Q02889 113 aa6.9□□□□□ -1.31
SSN3YPL042C YGR121W-AQ3E816 71 aa6.9□□□□□ -1.31
SSN3YPL042C RPR2P40571 144 aa6.87□□□□□ -1.31
SSN3YPL042C YLR162WQ06235 118 aa6.86□□□□□ -1.31
SSN3YPL042C YER188C-AP0C0V2 99 aa6.84□□□□□ -1.32
SSN3YPL042C DCV1P43595 202 aa6.84□□□□□ -1.32
SSN3YPL042C TOS6P48560 102 aa6.84□□□□□ -1.32
SSN3YPL042C ERI1P62651 68 aaKnown RBP6.84□□□□□ -1.32
SSN3YPL042C YJL197C-AP0C5P0 93 aa6.82□□□□□ -1.32
SSN3YPL042C AIM4P38305 123 aaPredicted RBP6.82□□□□□ -1.32
SSN3YPL042C YLR122CQ12312 125 aa6.82□□□□□ -1.32
SSN3YPL042C YJR085CP47131 105 aaKnown RBP6.81□□□□□ -1.32
SSN3YPL042C YKL065W-AQ2V2P2 73 aa6.81□□□□□ -1.32
SSN3YPL042C YEL067CP39978 195 aa6.81□□□□□ -1.32
SSN3YPL042C YCR001WP25347 104 aa6.8□□□□□ -1.32
SSN3YPL042C YHR125WP38831 101 aa6.8□□□□□ -1.32
SSN3YPL042C YGL149WP53116 101 aa6.8□□□□□ -1.32
SSN3YPL042C YER078W-AQ3E7A2 54 aa6.8□□□□□ -1.32
SSN3YPL042C RTC6O14464 93 aa6.79□□□□□ -1.32
SSN3YPL042C RPL36BO14455 100 aaKnown RBP6.78□□□□□ -1.32
SSN3YPL042C RPL36AP05745 100 aaPredicted RBP6.78□□□□□ -1.32
SSN3YPL042C DSE2P38844 325 aa6.78□□□□□ -1.32
SSN3YPL042C KRE9P39005 276 aa6.78□□□□□ -1.32
SSN3YPL042C VAM10Q08474 114 aa6.78□□□□□ -1.32
SSN3YPL042C HMRA2P0CY13 119 aa6.77□□□□□ -1.32
SSN3YPL042C COX23P38824 151 aa6.77□□□□□ -1.32
SSN3YPL042C YOR008C-AQ3E7B9 74 aa6.77□□□□□ -1.32
SSN3YPL042C YBR209WP38311 105 aa6.77□□□□□ -1.33
SSN3YPL042C YMR122CQ03879 124 aa6.77□□□□□ -1.33
SSN3YPL042C COA3Q3E7B2 85 aa6.77□□□□□ -1.33
SSN3YPL042C AIM19P40502 157 aa6.76□□□□□ -1.33
SSN3YPL042C YGR240C-AQ3E786 66 aa6.76□□□□□ -1.33
SSN3YPL042C YJR146WP47174 117 aa6.75□□□□□ -1.33
SSN3YPL042C PMP3P87284 55 aa6.75□□□□□ -1.33
SSN3YPL042C SGF11Q03067 99 aa6.74□□□□□ -1.33
SSN3YPL042C YLR194CQ05777 254 aa6.74□□□□□ -1.33
SSN3YPL042C YPR153WQ06537 140 aa6.74□□□□□ -1.33
SSN3YPL042C RDS3Q06835 107 aaPredicted RBP6.74□□□□□ -1.33
SSN3YPL042C AUA1P32450 94 aa6.74□□□□□ -1.33
SSN3YPL042C SPC1P46965 94 aa6.71□□□□□ -1.34
SSN3YPL042C YDR115WQ04598 105 aa6.71□□□□□ -1.34
SSN3YPL042C RPL26BP53221 127 aaKnown RBP6.7□□□□□ -1.34
SSN3YPL042C YMR122W-AQ3E842 84 aa6.68□□□□□ -1.34
SSN3YPL042C IRC21Q04772 201 aa6.67□□□□□ -1.34
SSN3YPL042C ECM19Q06011 112 aa6.67□□□□□ -1.34
SSN3YPL042C YCR095W-AQ3E787 52 aa6.67□□□□□ -1.34
SSN3YPL042C YHR032W-AP0C5N6 59 aa6.66□□□□□ -1.34
SSN3YPL042C YEL008WP40001 126 aa6.66□□□□□ -1.34
SSN3YPL042C QCR8P08525 94 aa6.65□□□□□ -1.35
SSN3YPL042C YDL022C-AP0C5L6 82 aa6.65□□□□□ -1.35
SSN3YPL042C IGD1P43598 195 aa6.64□□□□□ -1.35
SSN3YPL042C MRX7P53869 86 aa6.61□□□□□ -1.35
SSN3YPL042C YBR027CP38220 110 aa6.59□□□□□ -1.35
SSN3YPL042C EDC1P53080 175 aaPredicted RBP6.59□□□□□ -1.35
SSN3YPL042C YNR077CP53758 84 aa6.59□□□□□ -1.35
SSN3YPL042C YIL156W-BQ2V2P4 73 aa6.59□□□□□ -1.35
SSN3YPL042C SNA2P56508 79 aa6.58□□□□□ -1.36
SSN3YPL042C YBR219CP38317 127 aa6.58□□□□□ -1.36
SSN3YPL042C RPL33AP05744 107 aaKnown RBP6.57□□□□□ -1.36
SSN3YPL042C SHU1P38751 150 aa6.57□□□□□ -1.36
SSN3YPL042C RPL33BP41056 107 aaKnown RBP6.57□□□□□ -1.36
SSN3YPL042C YPR010C-AA5Z2X5 72 aa6.56□□□□□ -1.36
SSN3YPL042C YLR285C-AQ3E771 56 aa6.56□□□□□ -1.36
SSN3YPL042C CMC4Q3E7A9 73 aa6.56□□□□□ -1.36
SSN3YPL042C YFL067WP43537 175 aa6.55□□□□□ -1.36
SSN3YPL042C YDR010CQ12426 110 aa6.55□□□□□ -1.36
SSN3YPL042C YDR182W-AQ3E796 67 aa6.55□□□□□ -1.36
SSN3YPL042C YLL066W-BQ8TGJ7 56 aa6.55□□□□□ -1.36
SSN3YPL042C MRPS12P53732 153 aa6.54□□□□□ -1.36
SSN3YPL042C NOP10Q6Q547 58 aaPredicted RBP6.52□□□□□ -1.37
SSN3YPL042C YAL067W-AQ8TGK6 75 aa6.51□□□□□ -1.37
SSN3YPL042C HOT13P36078 116 aa6.5□□□□□ -1.37
SSN3YPL042C YPR195CQ06594 109 aa6.5□□□□□ -1.37
SSN3YPL042C RPC10P40422 70 aa6.49□□□□□ -1.37
SSN3YPL042C YEL014CP39999 101 aa6.49□□□□□ -1.37
SSN3YPL042C BSC4P53841 131 aa6.49□□□□□ -1.37
SSN3YPL042C YNL190WP53872 204 aa6.49□□□□□ -1.37
SSN3YPL042C YLR236CA0A023PZG4 107 aa6.48□□□□□ -1.37
SSN3YPL042C YOL166W-AQ8TGJ1 51 aa6.46□□□□□ -1.37
SSN3YPL042C RPS30AP0CX33 63 aaKnown RBP6.45□□□□□ -1.38
SSN3YPL042C RPS30BP0CX34 63 aaKnown RBP6.45□□□□□ -1.38
SSN3YPL042C COX8P04039 78 aa6.41□□□□□ -1.38
SSN3YPL042C YNL042W-BQ3E7Z2 85 aa6.4□□□□□ -1.38
SSN3YPL042C YOR034C-AQ3E735 80 aa6.39□□□□□ -1.39
SSN3YPL042C YLL006W-AQ3E814 58 aa6.39□□□□□ -1.39
SSN3YPL042C AQY2P0CD90 149 aa6.36□□□□□ -1.39
SSN3YPL042C MVB12P42939 101 aa6.34□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms