RNA–Protein interactions for RNA: YPL018W

CTF19, Transcript of Outer kinetochore protein, needed for accurate chromosome segregation, yeastyeast

Gene CTF19, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF19YPL018W YML100W-AQ8TGT0 57 aa4.34□□□□□ -1.71
CTF19YPL018W RPL29P05747 59 aaPredicted RBP4.33□□□□□ -1.72
CTF19YPL018W YPR170W-BP0C5R9 85 aa4.33□□□□□ -1.72
CTF19YPL018W NHP2P32495 156 aaPredicted RBP4.33□□□□□ -1.72
CTF19YPL018W RGM1Q00453 211 aa4.33□□□□□ -1.72
CTF19YPL018W HHF1P02309 103 aaKnown RBP4.32□□□□□ -1.72
CTF19YPL018W BET1P22804 142 aa4.32□□□□□ -1.72
CTF19YPL018W IGD1P43598 195 aa4.32□□□□□ -1.72
CTF19YPL018W KNH1P50112 268 aa4.32□□□□□ -1.72
CTF19YPL018W YCR050CP25630 102 aa4.31□□□□□ -1.72
CTF19YPL018W SPG1P50088 95 aa4.31□□□□□ -1.72
CTF19YPL018W YLR296WQ05898 108 aa4.31□□□□□ -1.72
CTF19YPL018W LSM6Q06406 86 aaKnown RBP4.31□□□□□ -1.72
CTF19YPL018W YKL023C-AQ2V2P3 75 aa4.31□□□□□ -1.72
CTF19YPL018W YLR307C-AQ3E825 87 aa4.31□□□□□ -1.72
CTF19YPL018W KSH1Q8TGJ3 72 aa4.31□□□□□ -1.72
CTF19YPL018W GIS2P53849 153 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
CTF19YPL018W LCL1Q02786 101 aa4.3□□□□□ -1.72
CTF19YPL018W IRC21Q04772 201 aa4.3□□□□□ -1.72
CTF19YPL018W RPL26AP05743 127 aaKnown RBP4.29□□□□□ -1.72
CTF19YPL018W INO4P13902 151 aa4.29□□□□□ -1.72
CTF19YPL018W UBC4P15731 148 aa4.29□□□□□ -1.72
CTF19YPL018W DDR48P18899 430 aaKnown RBP4.29□□□□□ -1.72
CTF19YPL018W RPL26BP53221 127 aaKnown RBP4.29□□□□□ -1.72
CTF19YPL018W YOR376W-AQ3E805 51 aa4.29□□□□□ -1.72
CTF19YPL018W YFL065CP43539 102 aa4.28□□□□□ -1.72
CTF19YPL018W ICY1Q04329 127 aa4.28□□□□□ -1.72
CTF19YPL018W YPR203WQ08994 102 aa4.28□□□□□ -1.72
CTF19YPL018W YIL102C-AQ2V2P5 75 aa4.28□□□□□ -1.72
CTF19YPL018W YOR034C-AQ3E735 80 aa4.28□□□□□ -1.72
CTF19YPL018W YNL162W-AQ3E7A8 72 aa4.28□□□□□ -1.72
CTF19YPL018W MSA2P36157 363 aa4.27□□□□□ -1.73
CTF19YPL018W YLR156WP0CE96 114 aa4.26□□□□□ -1.73
CTF19YPL018W YLR159WP0CE97 114 aa4.26□□□□□ -1.73
CTF19YPL018W YLR161WP0CE98 114 aa4.26□□□□□ -1.73
CTF19YPL018W HUR1P45820 110 aa4.26□□□□□ -1.73
CTF19YPL018W YAL063C-AQ3E791 96 aa4.26□□□□□ -1.73
CTF19YPL018W YNL198CP40166 100 aa4.25□□□□□ -1.73
CTF19YPL018W FYV12Q08559 129 aa4.23□□□□□ -1.73
CTF19YPL018W YNL042W-BQ3E7Z2 85 aa4.23□□□□□ -1.73
CTF19YPL018W YJL127C-BQ3E828 52 aa4.23□□□□□ -1.73
CTF19YPL018W FYV5P25585 152 aa4.22□□□□□ -1.73
CTF19YPL018W TDA2P40045 126 aa4.22□□□□□ -1.73
CTF19YPL018W DDR2P89113 61 aa4.22□□□□□ -1.73
CTF19YPL018W YBR230W-AQ3E762 66 aa4.22□□□□□ -1.73
CTF19YPL018W MIC10Q96VH5 97 aa4.22□□□□□ -1.73
CTF19YPL018W MPC3P53311 146 aa4.21□□□□□ -1.74
CTF19YPL018W YLR236CA0A023PZG4 107 aa4.2□□□□□ -1.74
CTF19YPL018W YCR085WP25650 117 aa4.2□□□□□ -1.74
CTF19YPL018W YHL018WP38744 120 aaPredicted RBP4.2□□□□□ -1.74
CTF19YPL018W RPA12P32529 125 aaKnown RBP4.19□□□□□ -1.74
CTF19YPL018W LIP1Q03579 150 aa4.19□□□□□ -1.74
CTF19YPL018W DSE2P38844 325 aa4.18□□□□□ -1.74
CTF19YPL018W RSM19P53733 91 aaPredicted RBP4.18□□□□□ -1.74
CTF19YPL018W KRE1P17260 313 aa4.17□□□□□ -1.74
CTF19YPL018W HOT13P36078 116 aa4.17□□□□□ -1.74
CTF19YPL018W YHL042WP38729 150 aa4.17□□□□□ -1.74
CTF19YPL018W YFL067WP43537 175 aa4.17□□□□□ -1.74
CTF19YPL018W YJR085CP47131 105 aaKnown RBP4.17□□□□□ -1.74
CTF19YPL018W BSC4P53841 131 aa4.17□□□□□ -1.74
CTF19YPL018W ATP20Q12233 115 aa4.17□□□□□ -1.74
CTF19YPL018W YGL149WP53116 101 aa4.16□□□□□ -1.74
CTF19YPL018W YHR007C-AQ07074 71 aa4.16□□□□□ -1.74
CTF19YPL018W YEL045CP32616 141 aa4.15□□□□□ -1.75
CTF19YPL018W YJR107C-AP0CT86 78 aa4.14□□□□□ -1.75
CTF19YPL018W YOR072WQ08486 104 aa4.14□□□□□ -1.75
CTF19YPL018W YGR121W-AQ3E816 71 aa4.14□□□□□ -1.75
CTF19YPL018W QCR10P37299 77 aa4.13□□□□□ -1.75
CTF19YPL018W RPL36BO14455 100 aaKnown RBP4.12□□□□□ -1.75
CTF19YPL018W YOR268CQ08734 132 aa4.12□□□□□ -1.75
CTF19YPL018W EMC6Q12431 108 aa4.12□□□□□ -1.75
CTF19YPL018W TOM6P33448 61 aa4.11□□□□□ -1.75
CTF19YPL018W ATX1P38636 73 aa4.11□□□□□ -1.75
CTF19YPL018W SOM1Q05676 74 aa4.11□□□□□ -1.75
CTF19YPL018W YDR119W-AQ2V2P9 66 aa4.11□□□□□ -1.75
CTF19YPL018W YCR043CP25361 127 aa4.09□□□□□ -1.75
CTF19YPL018W YER187WP40102 141 aa4.09□□□□□ -1.75
CTF19YPL018W ATP18P81450 59 aa4.09□□□□□ -1.75
CTF19YPL018W YMR230W-AQ3E7B5 62 aa4.08□□□□□ -1.76
CTF19YPL018W YOR381W-AQ3E804 55 aa4.08□□□□□ -1.76
CTF19YPL018W YHR125WP38831 101 aa4.07□□□□□ -1.76
CTF19YPL018W YDR010CQ12426 110 aa4.07□□□□□ -1.76
CTF19YPL018W YFR009W-AP0C5M9 85 aa4.06□□□□□ -1.76
CTF19YPL018W YBR027CP38220 110 aa4.05□□□□□ -1.76
CTF19YPL018W YHL005CP38752 130 aa4.04□□□□□ -1.76
CTF19YPL018W RSM18P40033 138 aa4.04□□□□□ -1.76
CTF19YPL018W ECM19Q06011 112 aa4.03□□□□□ -1.76
CTF19YPL018W YDR381C-AQ3E6R5 114 aa4.03□□□□□ -1.76
CTF19YPL018W YHR213W-BQ8TGK1 99 aa4.03□□□□□ -1.76
CTF19YPL018W ICS3P47034 131 aa4.02□□□□□ -1.77
CTF19YPL018W RPL38P49167 78 aaKnown RBP4.01□□□□□ -1.77
CTF19YPL018W YFL041W-AQ3E817 63 aa4.01□□□□□ -1.77
CTF19YPL018W YER078W-AQ3E7A2 54 aa4□□□□□ -1.77
CTF19YPL018W YJL133C-AQ3E7A3 74 aa4□□□□□ -1.77
CTF19YPL018W OST5Q92316 86 aa4□□□□□ -1.77
CTF19YPL018W EDC1P53080 175 aaPredicted RBP3.99□□□□□ -1.77
CTF19YPL018W YLR162WQ06235 118 aa3.98□□□□□ -1.77
CTF19YPL018W YPL038W-AQ3E7B4 63 aa3.98□□□□□ -1.77
CTF19YPL018W YHR032W-AP0C5N6 59 aa3.97□□□□□ -1.77
CTF19YPL018W YLR157W-DP0CE99 70 aa3.97□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms