RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W VMR1P38735 1592 aa0.71□□□□□ -2.3
SRL1YOR247W SNQ2P32568 1501 aaKnown RBP0.71□□□□□ -2.3
SRL1YOR247W TOM6P33448 61 aa0.71□□□□□ -2.3
SRL1YOR247W YKL068W-AQ3E826 78 aa0.71□□□□□ -2.3
SRL1YOR247W TY2B-BQ12491 1770 aa0.7□□□□□ -2.3
SRL1YOR247W YHR214C-DP0CX93 97 aa0.7□□□□□ -2.3
SRL1YOR247W TY1B-JR2P47100 1755 aaKnown RBP0.7□□□□□ -2.3
SRL1YOR247W TY1B-ER2Q03619 1755 aa0.7□□□□□ -2.3
SRL1YOR247W TY1B-MR1Q04214 1755 aa0.7□□□□□ -2.3
SRL1YOR247W TY1B-MR2Q04670 1755 aaKnown RBP0.7□□□□□ -2.3
SRL1YOR247W TY1B-LR1Q12088 1755 aaKnown RBP0.7□□□□□ -2.3
SRL1YOR247W TY1B-NL1Q12112 1755 aa0.7□□□□□ -2.3
SRL1YOR247W TY1B-GR1Q12141 1755 aa0.7□□□□□ -2.3
SRL1YOR247W TY1B-DR3Q99231 1755 aa0.7□□□□□ -2.3
SRL1YOR247W PDR5P33302 1511 aaKnown RBP0.69□□□□□ -2.3
SRL1YOR247W YBT1P32386 1661 aa0.69□□□□□ -2.3
SRL1YOR247W MLP2P40457 1679 aa0.69□□□□□ -2.3
SRL1YOR247W YAL065CO13511 128 aa0.69□□□□□ -2.3
SRL1YOR247W NUP188P52593 1655 aaKnown RBP0.69□□□□□ -2.3
SRL1YOR247W FPR2P32472 135 aa0.68□□□□□ -2.3
SRL1YOR247W YMR175W-AQ3E766 64 aa0.68□□□□□ -2.3
SRL1YOR247W YMR122W-AQ3E842 84 aa0.68□□□□□ -2.3
SRL1YOR247W YSP2Q06681 1438 aa0.67□□□□□ -2.3
SRL1YOR247W YFR009W-AP0C5M9 85 aa0.66□□□□□ -2.3
SRL1YOR247W YBR016WP38216 128 aa0.66□□□□□ -2.3
SRL1YOR247W YOR343CQ12484 108 aa0.66□□□□□ -2.3
SRL1YOR247W GCN2P15442 1659 aa0.65□□□□□ -2.3
SRL1YOR247W ATP18P81450 59 aa0.65□□□□□ -2.31
SRL1YOR247W PAU23Q07987 124 aa0.65□□□□□ -2.31
SRL1YOR247W PAU17Q12370 124 aa0.65□□□□□ -2.31
SRL1YOR247W USO1P25386 1790 aa0.63□□□□□ -2.31
SRL1YOR247W CWP2P43497 92 aa0.63□□□□□ -2.31
SRL1YOR247W SDH6Q3E785 79 aa0.63□□□□□ -2.31
SRL1YOR247W TAO3P40468 2376 aa0.62□□□□□ -2.31
SRL1YOR247W YIL134C-AQ45U18 67 aa0.61□□□□□ -2.31
SRL1YOR247W TOM1Q03280 3268 aa0.61□□□□□ -2.31
SRL1YOR247W ECM29P38737 1868 aa0.61□□□□□ -2.31
SRL1YOR247W NUP192P47054 1683 aa0.6□□□□□ -2.31
SRL1YOR247W POC4Q12245 148 aaPredicted RBP0.6□□□□□ -2.31
SRL1YOR247W YOL097W-AQ3E7Y9 61 aa0.6□□□□□ -2.31
SRL1YOR247W NOP10Q6Q547 58 aaPredicted RBP0.6□□□□□ -2.31
SRL1YOR247W RRP5Q05022 1729 aaKnown RBP0.6□□□□□ -2.31
SRL1YOR247W FIG2P25653 1609 aa0.6□□□□□ -2.31
SRL1YOR247W CUP1-1P0CX80 61 aa0.59□□□□□ -2.31
SRL1YOR247W CUP1-2P0CX81 61 aa0.59□□□□□ -2.31
SRL1YOR247W YOR105WQ08504 108 aa0.59□□□□□ -2.31
SRL1YOR247W YCR085WP25650 117 aa0.58□□□□□ -2.32
SRL1YOR247W YPR145C-AQ2V2P0 78 aa0.58□□□□□ -2.32
SRL1YOR247W YKL065W-AQ2V2P2 73 aa0.58□□□□□ -2.32
SRL1YOR247W MLP1Q02455 1875 aaKnown RBP0.57□□□□□ -2.32
SRL1YOR247W YIL156W-BQ2V2P4 73 aa0.57□□□□□ -2.32
SRL1YOR247W STT4P37297 1900 aa0.57□□□□□ -2.32
SRL1YOR247W UTP10P42945 1769 aaKnown RBP0.56□□□□□ -2.32
SRL1YOR247W YBR032WP38223 100 aa0.55□□□□□ -2.32
SRL1YOR247W EDC1P53080 175 aaPredicted RBP0.55□□□□□ -2.32
SRL1YOR247W SGF11Q03067 99 aa0.55□□□□□ -2.32
SRL1YOR247W YPR108W-AQ3E7B3 70 aa0.55□□□□□ -2.32
SRL1YOR247W APC1P53886 1748 aa0.55□□□□□ -2.32
SRL1YOR247W FKS3Q04952 1785 aa0.55□□□□□ -2.32
SRL1YOR247W FLO1P32768 1537 aa0.54□□□□□ -2.32
SRL1YOR247W YDR034W-BQ6Q5X2 51 aa0.54□□□□□ -2.32
SRL1YOR247W MOT1P32333 1867 aa0.54□□□□□ -2.32
SRL1YOR247W VPS13Q07878 3144 aa0.53□□□□□ -2.32
SRL1YOR247W YOR314WQ12506 109 aa0.53□□□□□ -2.32
SRL1YOR247W YDR381C-AQ3E6R5 114 aa0.53□□□□□ -2.32
SRL1YOR247W YDL022C-AP0C5L6 82 aa0.51□□□□□ -2.33
SRL1YOR247W YGR025WP53216 100 aa0.51□□□□□ -2.33
SRL1YOR247W NUM1Q00402 2748 aa0.51□□□□□ -2.33
SRL1YOR247W IRA2P19158 3079 aa0.51□□□□□ -2.33
SRL1YOR247W BPH1P25356 2167 aa0.5□□□□□ -2.33
SRL1YOR247W LSM2P38203 95 aaKnown RBP0.5□□□□□ -2.33
SRL1YOR247W IRA1P18963 3092 aa0.5□□□□□ -2.33
SRL1YOR247W HKR1P41809 1802 aa0.5□□□□□ -2.33
SRL1YOR247W YDR119W-AQ2V2P9 66 aa0.49□□□□□ -2.33
SRL1YOR247W YGR121W-AQ3E816 71 aa0.49□□□□□ -2.33
SRL1YOR247W PMD1P32634 1753 aa0.48□□□□□ -2.33
SRL1YOR247W SWM2P40342 146 aa0.48□□□□□ -2.33
SRL1YOR247W YHR213W-AQ8TGT4 77 aa0.48□□□□□ -2.33
SRL1YOR247W TEL1P38110 2787 aa0.47□□□□□ -2.33
SRL1YOR247W QCR9P22289 66 aa0.47□□□□□ -2.33
SRL1YOR247W TIM12P32830 109 aa0.47□□□□□ -2.33
SRL1YOR247W YDR524C-BQ3E6R4 66 aa0.46□□□□□ -2.34
SRL1YOR247W YKL018C-AQ3E7A7 99 aa0.45□□□□□ -2.34
SRL1YOR247W YGR035W-AQ45U48 73 aa0.45□□□□□ -2.34
SRL1YOR247W YOR032W-AQ8TGS1 66 aa0.45□□□□□ -2.34
SRL1YOR247W YPR117WQ06116 2489 aa0.44□□□□□ -2.34
SRL1YOR247W YIL046W-AQ3E7Z4 54 aa0.42□□□□□ -2.34
SRL1YOR247W SEN1Q00416 2231 aaKnown RBP0.42□□□□□ -2.34
SRL1YOR247W ATP17Q06405 101 aa0.41□□□□□ -2.34
SRL1YOR247W PAI3P01094 68 aa0.4□□□□□ -2.35
SRL1YOR247W MDN1Q12019 4910 aaKnown RBP0.4□□□□□ -2.35
SRL1YOR247W TOR1P35169 2470 aa0.4□□□□□ -2.35
SRL1YOR247W YBR056W-AI2HB52 66 aa0.39□□□□□ -2.35
SRL1YOR247W YBL044WP38194 122 aa0.39□□□□□ -2.35
SRL1YOR247W PAU7P39545 55 aa0.39□□□□□ -2.35
SRL1YOR247W ERI1P62651 68 aaKnown RBP0.39□□□□□ -2.35
SRL1YOR247W YCR108CQ3E819 63 aa0.39□□□□□ -2.35
SRL1YOR247W YLR146W-AQ2V2P1 62 aa0.38□□□□□ -2.35
SRL1YOR247W GCN1P33892 2672 aaKnown RBP0.38□□□□□ -2.35
SRL1YOR247W DYN1P36022 4092 aa0.38□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 54.1 ms