RNA–Protein interactions for RNA: YNL335W

DDI3, Transcript of Protein of unknown function, yeastyeast

Gene DDI3, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDI3YNL335W ERI1P62651 68 aaKnown RBP2.13□□□□□ -2.07
DDI3YNL335W ATP18P81450 59 aa2.13□□□□□ -2.07
DDI3YNL335W IRC21Q04772 201 aa2.13□□□□□ -2.07
DDI3YNL335W TOM6P33448 61 aa2.12□□□□□ -2.07
DDI3YNL335W YGR240C-AQ3E786 66 aa2.12□□□□□ -2.07
DDI3YNL335W TOR2P32600 2474 aaKnown RBP2.12□□□□□ -2.07
DDI3YNL335W URA2P07259 2214 aaKnown RBP2.11□□□□□ -2.07
DDI3YNL335W YAL065CO13511 128 aa2.11□□□□□ -2.07
DDI3YNL335W RPL29P05747 59 aaPredicted RBP2.11□□□□□ -2.07
DDI3YNL335W YHR212W-AP0CX91 67 aa2.11□□□□□ -2.07
DDI3YNL335W YCR001WP25347 104 aa2.11□□□□□ -2.07
DDI3YNL335W EDC1P53080 175 aaPredicted RBP2.11□□□□□ -2.07
DDI3YNL335W ICY1Q04329 127 aa2.11□□□□□ -2.07
DDI3YNL335W YMR175W-AQ3E766 64 aa2.11□□□□□ -2.07
DDI3YNL335W YLR285C-AQ3E771 56 aa2.11□□□□□ -2.07
DDI3YNL335W YLR361C-AQ3E795 98 aa2.11□□□□□ -2.07
DDI3YNL335W TEL1P38110 2787 aa2.1□□□□□ -2.07
DDI3YNL335W MVB12P42939 101 aa2.1□□□□□ -2.07
DDI3YNL335W RPL38P49167 78 aaKnown RBP2.1□□□□□ -2.07
DDI3YNL335W RSM19P53733 91 aaPredicted RBP2.1□□□□□ -2.07
DDI3YNL335W YDL241WQ07738 123 aa2.1□□□□□ -2.07
DDI3YNL335W YPR010C-AA5Z2X5 72 aa2.09□□□□□ -2.07
DDI3YNL335W YFR009W-AP0C5M9 85 aa2.09□□□□□ -2.07
DDI3YNL335W AQY2P0CD90 149 aa2.09□□□□□ -2.07
DDI3YNL335W YAL064WP39711 94 aa2.09□□□□□ -2.07
DDI3YNL335W TDA2P40045 126 aa2.09□□□□□ -2.07
DDI3YNL335W YFL019CP43576 117 aa2.09□□□□□ -2.07
DDI3YNL335W YMR320WQ04897 101 aa2.09□□□□□ -2.07
DDI3YNL335W YBL039W-BP0C268 59 aa2.08□□□□□ -2.08
DDI3YNL335W YER039C-AP0CD97 72 aa2.08□□□□□ -2.08
DDI3YNL335W RPL43AP0CX25 92 aaKnown RBP2.08□□□□□ -2.08
DDI3YNL335W RPL43BP0CX26 92 aa2.08□□□□□ -2.08
DDI3YNL335W YCR050CP25630 102 aa2.08□□□□□ -2.08
DDI3YNL335W YER187WP40102 141 aa2.08□□□□□ -2.08
DDI3YNL335W RPC10P40422 70 aa2.08□□□□□ -2.08
DDI3YNL335W GAT4P40569 121 aa2.08□□□□□ -2.08
DDI3YNL335W ATP20Q12233 115 aa2.08□□□□□ -2.08
DDI3YNL335W FYV5P25585 152 aa2.07□□□□□ -2.08
DDI3YNL335W RSM18P40033 138 aa2.07□□□□□ -2.08
DDI3YNL335W SGF11Q03067 99 aa2.07□□□□□ -2.08
DDI3YNL335W YBR230W-AQ3E762 66 aa2.07□□□□□ -2.08
DDI3YNL335W YGR035W-AQ45U48 73 aa2.07□□□□□ -2.08
DDI3YNL335W RPL33AP05744 107 aaKnown RBP2.06□□□□□ -2.08
DDI3YNL335W UBC4P15731 148 aa2.06□□□□□ -2.08
DDI3YNL335W YRA2P36036 203 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
DDI3YNL335W AIM4P38305 123 aaPredicted RBP2.06□□□□□ -2.08
DDI3YNL335W ICS3P47034 131 aa2.06□□□□□ -2.08
DDI3YNL335W YOR314WQ12506 109 aa2.06□□□□□ -2.08
DDI3YNL335W YDR246W-AQ3E763 66 aa2.06□□□□□ -2.08
DDI3YNL335W YJL127C-BQ3E828 52 aa2.06□□□□□ -2.08
DDI3YNL335W COX23P38824 151 aa2.05□□□□□ -2.08
DDI3YNL335W SFT1P43682 97 aa2.05□□□□□ -2.08
DDI3YNL335W SPC1P46965 94 aa2.05□□□□□ -2.08
DDI3YNL335W SBH1P52870 82 aa2.05□□□□□ -2.08
DDI3YNL335W YOL014WQ08110 124 aa2.05□□□□□ -2.08
DDI3YNL335W YAR023CD6VPM8 179 aa2.04□□□□□ -2.08
DDI3YNL335W YNL042W-BQ3E7Z2 85 aa2.04□□□□□ -2.08
DDI3YNL335W YLR307C-AQ3E825 87 aa2.04□□□□□ -2.08
DDI3YNL335W YHR213W-BQ8TGK1 99 aa2.04□□□□□ -2.08
DDI3YNL335W YML100W-AQ8TGT0 57 aa2.04□□□□□ -2.08
DDI3YNL335W Q0032Q9ZZX7 96 aa2.04□□□□□ -2.08
DDI3YNL335W YHR007C-AQ07074 71 aa2.03□□□□□ -2.08
DDI3YNL335W YJL133C-AQ3E7A3 74 aa2.03□□□□□ -2.08
DDI3YNL335W NOP10Q6Q547 58 aaPredicted RBP2.03□□□□□ -2.08
DDI3YNL335W RTC6O14464 93 aa2.02□□□□□ -2.09
DDI3YNL335W YIL102CP40488 101 aa2.02□□□□□ -2.09
DDI3YNL335W SNA2P56508 79 aa2.02□□□□□ -2.09
DDI3YNL335W RRT15Q3E811 62 aa2.02□□□□□ -2.09
DDI3YNL335W RPL36BO14455 100 aaKnown RBP2.01□□□□□ -2.09
DDI3YNL335W RPL36AP05745 100 aaPredicted RBP2.01□□□□□ -2.09
DDI3YNL335W YGL041C-BQ3E750 60 aa2.01□□□□□ -2.09
DDI3YNL335W YDR182W-AQ3E796 67 aa2.01□□□□□ -2.09
DDI3YNL335W YLL066W-BQ8TGJ7 56 aa2.01□□□□□ -2.09
DDI3YNL335W YOR072WQ08486 104 aa2□□□□□ -2.09
DDI3YNL335W PRP8P33334 2413 aaKnown RBP2□□□□□ -2.09
DDI3YNL335W MEC1P38111 2368 aa1.99□□□□□ -2.09
DDI3YNL335W YCL042WP25572 119 aa1.99□□□□□ -2.09
DDI3YNL335W BSC4P53841 131 aa1.99□□□□□ -2.09
DDI3YNL335W DDR2P89113 61 aa1.99□□□□□ -2.09
DDI3YNL335W LIP1Q03579 150 aa1.99□□□□□ -2.09
DDI3YNL335W KTI11Q3E840 82 aa1.99□□□□□ -2.09
DDI3YNL335W YOL166W-AQ8TGJ1 51 aa1.99□□□□□ -2.09
DDI3YNL335W KSH1Q8TGJ3 72 aa1.99□□□□□ -2.09
DDI3YNL335W YHL005CP38752 130 aa1.98□□□□□ -2.09
DDI3YNL335W YGL193CP53097 103 aa1.98□□□□□ -2.09
DDI3YNL335W YGR121W-AQ3E816 71 aa1.98□□□□□ -2.09
DDI3YNL335W RPS30AP0CX33 63 aaKnown RBP1.97□□□□□ -2.09
DDI3YNL335W RPS30BP0CX34 63 aaKnown RBP1.97□□□□□ -2.09
DDI3YNL335W YGR164WP53291 111 aa1.97□□□□□ -2.09
DDI3YNL335W YLR412C-AQ3E742 68 aa1.97□□□□□ -2.09
DDI3YNL335W MIC10Q96VH5 97 aa1.97□□□□□ -2.09
DDI3YNL335W YOR381W-AQ3E804 55 aa1.96□□□□□ -2.1
DDI3YNL335W RPS28BP0C0X0 67 aaKnown RBP1.95□□□□□ -2.1
DDI3YNL335W AUA1P32450 94 aa1.95□□□□□ -2.1
DDI3YNL335W YAR064WP39563 99 aa1.95□□□□□ -2.1
DDI3YNL335W RPS28AQ3E7X9 67 aaPredicted RBP1.95□□□□□ -2.1
DDI3YNL335W YOL013W-AP0C272 63 aaPredicted RBP1.94□□□□□ -2.1
DDI3YNL335W YJL197C-AP0C5P0 93 aa1.94□□□□□ -2.1
DDI3YNL335W CUP1-1P0CX80 61 aa1.94□□□□□ -2.1
DDI3YNL335W CUP1-2P0CX81 61 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 58.7 ms