RNA–Protein interactions for RNA: YNL054W-A

YNL054W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YNL054W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-AYNL054W-A ESC1Q03661 1658 aaKnown RBP1.08□□□□□ -2.24
YNL054W-AYNL054W-A BCK1Q01389 1478 aa1.07□□□□□ -2.24
YNL054W-AYNL054W-A TY1B-BRQ12193 1756 aa1.07□□□□□ -2.24
YNL054W-AYNL054W-A TY1B-GR3Q12316 1755 aa1.07□□□□□ -2.24
YNL054W-AYNL054W-A TY1B-ORQ92393 1755 aa1.07□□□□□ -2.24
YNL054W-AYNL054W-A RPA190P10964 1664 aaKnown RBP1.07□□□□□ -2.24
YNL054W-AYNL054W-A DOP1Q03921 1698 aa1.07□□□□□ -2.24
YNL054W-AYNL054W-A YOR093CQ12275 1648 aa1.06□□□□□ -2.24
YNL054W-AYNL054W-A TY1B-JR2P47100 1755 aaKnown RBP1.06□□□□□ -2.24
YNL054W-AYNL054W-A TY1B-ER2Q03619 1755 aa1.06□□□□□ -2.24
YNL054W-AYNL054W-A TY1B-MR1Q04214 1755 aa1.06□□□□□ -2.24
YNL054W-AYNL054W-A TY1B-MR2Q04670 1755 aaKnown RBP1.06□□□□□ -2.24
YNL054W-AYNL054W-A TY1B-LR1Q12088 1755 aaKnown RBP1.06□□□□□ -2.24
YNL054W-AYNL054W-A TY1B-NL1Q12112 1755 aa1.06□□□□□ -2.24
YNL054W-AYNL054W-A TY1B-GR1Q12141 1755 aa1.06□□□□□ -2.24
YNL054W-AYNL054W-A TY1B-BLQ12490 1755 aa1.06□□□□□ -2.24
YNL054W-AYNL054W-A MLP1Q02455 1875 aaKnown RBP1.06□□□□□ -2.24
YNL054W-AYNL054W-A YDR042CQ03205 200 aa1.06□□□□□ -2.24
YNL054W-AYNL054W-A YIL102C-AQ2V2P5 75 aa1.06□□□□□ -2.24
YNL054W-AYNL054W-A SPO14P36126 1683 aa1.05□□□□□ -2.24
YNL054W-AYNL054W-A YRF1-2P40105 1681 aa1.05□□□□□ -2.24
YNL054W-AYNL054W-A YCR085WP25650 117 aa1.05□□□□□ -2.24
YNL054W-AYNL054W-A TOM6P33448 61 aa1.05□□□□□ -2.24
YNL054W-AYNL054W-A YNL198CP40166 100 aa1.05□□□□□ -2.24
YNL054W-AYNL054W-A YNL190WP53872 204 aa1.05□□□□□ -2.24
YNL054W-AYNL054W-A VMR1P38735 1592 aa1.04□□□□□ -2.24
YNL054W-AYNL054W-A NUP188P52593 1655 aaKnown RBP1.04□□□□□ -2.24
YNL054W-AYNL054W-A YOR105WQ08504 108 aa1.04□□□□□ -2.24
YNL054W-AYNL054W-A YFL041W-AQ3E817 63 aa1.04□□□□□ -2.24
YNL054W-AYNL054W-A TY1B-NL2Q99337 1749 aaKnown RBP1.04□□□□□ -2.24
YNL054W-AYNL054W-A BUD3P25558 1636 aa1.03□□□□□ -2.24
YNL054W-AYNL054W-A YMR082CQ04276 118 aa1.03□□□□□ -2.24
YNL054W-AYNL054W-A DNF3Q12674 1656 aa1.03□□□□□ -2.25
YNL054W-AYNL054W-A YKL023C-AQ2V2P3 75 aa1.02□□□□□ -2.25
YNL054W-AYNL054W-A YDR381C-AQ3E6R5 114 aa1.02□□□□□ -2.25
YNL054W-AYNL054W-A IML1P47170 1584 aa1.01□□□□□ -2.25
YNL054W-AYNL054W-A YBT1P32386 1661 aa1.01□□□□□ -2.25
YNL054W-AYNL054W-A FPR2P32472 135 aa1.01□□□□□ -2.25
YNL054W-AYNL054W-A YSY6P38374 65 aa1.01□□□□□ -2.25
YNL054W-AYNL054W-A POC4Q12245 148 aaPredicted RBP1.01□□□□□ -2.25
YNL054W-AYNL054W-A RIM15P43565 1770 aa1.01□□□□□ -2.25
YNL054W-AYNL054W-A NUP192P47054 1683 aa1□□□□□ -2.25
YNL054W-AYNL054W-A QCR9P22289 66 aa1□□□□□ -2.25
YNL054W-AYNL054W-A PAU7P39545 55 aa1□□□□□ -2.25
YNL054W-AYNL054W-A YDR119W-AQ2V2P9 66 aa1□□□□□ -2.25
YNL054W-AYNL054W-A COX9P07255 59 aa0.99□□□□□ -2.25
YNL054W-AYNL054W-A YHR214C-DP0CX93 97 aa0.99□□□□□ -2.25
YNL054W-AYNL054W-A TIM12P32830 109 aa0.99□□□□□ -2.25
YNL054W-AYNL054W-A YOR343CQ12484 108 aa0.99□□□□□ -2.25
YNL054W-AYNL054W-A MOT1P32333 1867 aa0.98□□□□□ -2.25
YNL054W-AYNL054W-A FKS3Q04952 1785 aa0.98□□□□□ -2.25
YNL054W-AYNL054W-A YKL065W-AQ2V2P2 73 aa0.98□□□□□ -2.25
YNL054W-AYNL054W-A YNL042W-BQ3E7Z2 85 aa0.98□□□□□ -2.25
YNL054W-AYNL054W-A Q0032Q9ZZX7 96 aa0.98□□□□□ -2.25
YNL054W-AYNL054W-A YJR107C-AP0CT86 78 aa0.97□□□□□ -2.25
YNL054W-AYNL054W-A YOR314WQ12506 109 aa0.97□□□□□ -2.25
YNL054W-AYNL054W-A HUB1Q6Q546 73 aa0.97□□□□□ -2.25
YNL054W-AYNL054W-A RPL38P49167 78 aaKnown RBP0.96□□□□□ -2.26
YNL054W-AYNL054W-A BSC4P53841 131 aa0.96□□□□□ -2.26
YNL054W-AYNL054W-A YMR175W-AQ3E766 64 aa0.96□□□□□ -2.26
YNL054W-AYNL054W-A YKL018C-AQ3E7A7 99 aa0.96□□□□□ -2.26
YNL054W-AYNL054W-A COA2Q3E823 68 aa0.96□□□□□ -2.26
YNL054W-AYNL054W-A ECM29P38737 1868 aa0.96□□□□□ -2.26
YNL054W-AYNL054W-A APC1P53886 1748 aa0.96□□□□□ -2.26
YNL054W-AYNL054W-A SPI1P40092 148 aa0.95□□□□□ -2.26
YNL054W-AYNL054W-A ERI1P62651 68 aaKnown RBP0.95□□□□□ -2.26
YNL054W-AYNL054W-A YDR182W-AQ3E796 67 aa0.95□□□□□ -2.26
YNL054W-AYNL054W-A YAL065CO13511 128 aa0.94□□□□□ -2.26
YNL054W-AYNL054W-A RPS30AP0CX33 63 aaKnown RBP0.94□□□□□ -2.26
YNL054W-AYNL054W-A RPS30BP0CX34 63 aaKnown RBP0.94□□□□□ -2.26
YNL054W-AYNL054W-A YBR201C-AQ2V2Q3 67 aa0.94□□□□□ -2.26
YNL054W-AYNL054W-A YOR008C-AQ3E7B9 74 aa0.94□□□□□ -2.26
YNL054W-AYNL054W-A TOM7P53507 60 aa0.93□□□□□ -2.26
YNL054W-AYNL054W-A SGF11Q03067 99 aa0.93□□□□□ -2.26
YNL054W-AYNL054W-A YOR192C-CQ3E736 78 aa0.93□□□□□ -2.26
YNL054W-AYNL054W-A YGL258W-AQ3E740 77 aa0.93□□□□□ -2.26
YNL054W-AYNL054W-A SDH6Q3E785 79 aa0.93□□□□□ -2.26
YNL054W-AYNL054W-A YGR121W-AQ3E816 71 aa0.93□□□□□ -2.26
YNL054W-AYNL054W-A HKR1P41809 1802 aa0.93□□□□□ -2.26
YNL054W-AYNL054W-A YLR157W-DP0CE99 70 aa0.92□□□□□ -2.26
YNL054W-AYNL054W-A TOS6P48560 102 aa0.92□□□□□ -2.26
YNL054W-AYNL054W-A YPR108W-AQ3E7B3 70 aa0.92□□□□□ -2.26
YNL054W-AYNL054W-A NOP10Q6Q547 58 aaPredicted RBP0.92□□□□□ -2.26
YNL054W-AYNL054W-A PMD1P32634 1753 aa0.92□□□□□ -2.26
YNL054W-AYNL054W-A EDC1P53080 175 aaPredicted RBP0.91□□□□□ -2.26
YNL054W-AYNL054W-A ATP18P81450 59 aa0.91□□□□□ -2.26
YNL054W-AYNL054W-A ATP17Q06405 101 aa0.91□□□□□ -2.26
YNL054W-AYNL054W-A YLR342W-AQ3E810 57 aa0.91□□□□□ -2.26
YNL054W-AYNL054W-A YGR035W-AQ45U48 73 aa0.91□□□□□ -2.26
YNL054W-AYNL054W-A YOR032W-AQ8TGS1 66 aa0.91□□□□□ -2.26
YNL054W-AYNL054W-A YMR001C-AQ8TGS9 76 aa0.91□□□□□ -2.26
YNL054W-AYNL054W-A YDL022C-AP0C5L6 82 aa0.9□□□□□ -2.26
YNL054W-AYNL054W-A YIL156W-BQ2V2P4 73 aa0.9□□□□□ -2.26
YNL054W-AYNL054W-A YDR246W-AQ3E763 66 aa0.9□□□□□ -2.26
YNL054W-AYNL054W-A FLO1P32768 1537 aa0.9□□□□□ -2.27
YNL054W-AYNL054W-A STT4P37297 1900 aa0.9□□□□□ -2.27
YNL054W-AYNL054W-A YPR010C-AA5Z2X5 72 aa0.89□□□□□ -2.27
YNL054W-AYNL054W-A SIP18P50263 79 aa0.89□□□□□ -2.27
YNL054W-AYNL054W-A YOL166W-AQ8TGJ1 51 aa0.89□□□□□ -2.27
YNL054W-AYNL054W-A COX7P10174 60 aa0.89□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms