RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W YHR086W-AQ3E746 53 aa1.83□□□□□ -2.12
UBP8YMR223W YDR246W-AQ3E763 66 aa1.83□□□□□ -2.12
UBP8YMR223W NOP10Q6Q547 58 aaPredicted RBP1.83□□□□□ -2.12
UBP8YMR223W BCK1Q01389 1478 aa1.83□□□□□ -2.12
UBP8YMR223W UTP10P42945 1769 aaKnown RBP1.83□□□□□ -2.12
UBP8YMR223W YNL146C-AQ3E7Z1 64 aa1.83□□□□□ -2.12
UBP8YMR223W PDR5P33302 1511 aaKnown RBP1.82□□□□□ -2.12
UBP8YMR223W FPR2P32472 135 aa1.82□□□□□ -2.12
UBP8YMR223W ERI1P62651 68 aaKnown RBP1.82□□□□□ -2.12
UBP8YMR223W YGL041C-BQ3E750 60 aa1.82□□□□□ -2.12
UBP8YMR223W BPH1P25356 2167 aa1.81□□□□□ -2.12
UBP8YMR223W APC1P53886 1748 aa1.81□□□□□ -2.12
UBP8YMR223W BRR2P32639 2163 aaKnown RBP1.81□□□□□ -2.12
UBP8YMR223W YDL022C-AP0C5L6 82 aa1.81□□□□□ -2.12
UBP8YMR223W AIM19P40502 157 aa1.81□□□□□ -2.12
UBP8YMR223W MOT1P32333 1867 aa1.81□□□□□ -2.12
UBP8YMR223W SPI1P40092 148 aa1.8□□□□□ -2.12
UBP8YMR223W YGR240C-AQ3E786 66 aa1.8□□□□□ -2.12
UBP8YMR223W VPS13Q07878 3144 aa1.8□□□□□ -2.12
UBP8YMR223W LCL1Q02786 101 aa1.78□□□□□ -2.12
UBP8YMR223W YNL122CP53921 115 aaPredicted RBP1.77□□□□□ -2.13
UBP8YMR223W MGR2Q02889 113 aa1.77□□□□□ -2.13
UBP8YMR223W YKL018C-AQ3E7A7 99 aa1.77□□□□□ -2.13
UBP8YMR223W YOR032W-AQ8TGS1 66 aa1.77□□□□□ -2.13
UBP8YMR223W GCN2P15442 1659 aa1.77□□□□□ -2.13
UBP8YMR223W URB1P34241 1764 aaKnown RBP1.77□□□□□ -2.13
UBP8YMR223W AQY2P0CD90 149 aa1.76□□□□□ -2.13
UBP8YMR223W YSY6P38374 65 aa1.76□□□□□ -2.13
UBP8YMR223W RIM15P43565 1770 aa1.76□□□□□ -2.13
UBP8YMR223W NUP192P47054 1683 aa1.75□□□□□ -2.13
UBP8YMR223W YHR212W-AP0CX91 67 aa1.74□□□□□ -2.13
UBP8YMR223W YNL042W-BQ3E7Z2 85 aa1.74□□□□□ -2.13
UBP8YMR223W YMR122W-AQ3E842 84 aa1.74□□□□□ -2.13
UBP8YMR223W YJL009WP47078 108 aa1.73□□□□□ -2.13
UBP8YMR223W PAU7P39545 55 aa1.72□□□□□ -2.13
UBP8YMR223W YNL190WP53872 204 aa1.72□□□□□ -2.13
UBP8YMR223W YOR034C-AQ3E735 80 aa1.72□□□□□ -2.13
UBP8YMR223W SNF2P22082 1703 aa1.71□□□□□ -2.14
UBP8YMR223W YIL086CP40503 102 aa1.71□□□□□ -2.14
UBP8YMR223W EDC1P53080 175 aaPredicted RBP1.71□□□□□ -2.14
UBP8YMR223W YBR201C-AQ2V2Q3 67 aa1.71□□□□□ -2.14
UBP8YMR223W SHU1P38751 150 aa1.7□□□□□ -2.14
UBP8YMR223W SEC16P48415 2195 aaKnown RBP1.7□□□□□ -2.14
UBP8YMR223W BLM10P43583 2143 aa1.7□□□□□ -2.14
UBP8YMR223W YCR001WP25347 104 aa1.69□□□□□ -2.14
UBP8YMR223W YKL023C-AQ2V2P3 75 aa1.69□□□□□ -2.14
UBP8YMR223W YOL013W-AP0C272 63 aaPredicted RBP1.68□□□□□ -2.14
UBP8YMR223W RPS30AP0CX33 63 aaKnown RBP1.68□□□□□ -2.14
UBP8YMR223W RPS30BP0CX34 63 aaKnown RBP1.68□□□□□ -2.14
UBP8YMR223W MVB12P42939 101 aa1.68□□□□□ -2.14
UBP8YMR223W Q0032Q9ZZX7 96 aa1.68□□□□□ -2.14
UBP8YMR223W POL2P21951 2222 aaKnown RBP1.68□□□□□ -2.14
UBP8YMR223W YMR007WQ03675 126 aa1.67□□□□□ -2.14
UBP8YMR223W ATP17Q06405 101 aa1.67□□□□□ -2.14
UBP8YMR223W HUG1Q6Q5K6 68 aa1.67□□□□□ -2.14
UBP8YMR223W SGF11Q03067 99 aa1.66□□□□□ -2.14
UBP8YMR223W YOR192C-CQ3E736 78 aa1.66□□□□□ -2.14
UBP8YMR223W YDR182W-AQ3E796 67 aa1.66□□□□□ -2.14
UBP8YMR223W YAR064WP39563 99 aa1.66□□□□□ -2.14
UBP8YMR223W YOL166W-AQ8TGJ1 51 aa1.66□□□□□ -2.14
UBP8YMR223W YJR128WP47162 119 aa1.65□□□□□ -2.15
UBP8YMR223W ATP18P81450 59 aa1.65□□□□□ -2.15
UBP8YMR223W HFA1P32874 2273 aa1.64□□□□□ -2.15
UBP8YMR223W YOR072WQ08486 104 aa1.63□□□□□ -2.15
UBP8YMR223W FIG2P25653 1609 aa1.61□□□□□ -2.15
UBP8YMR223W YPR117WQ06116 2489 aa1.6□□□□□ -2.15
UBP8YMR223W SDH6Q3E785 79 aa1.6□□□□□ -2.15
UBP8YMR223W SMX2P40204 77 aaKnown RBP1.59□□□□□ -2.15
UBP8YMR223W COX7P10174 60 aa1.58□□□□□ -2.16
UBP8YMR223W YOL097W-AQ3E7Y9 61 aa1.58□□□□□ -2.16
UBP8YMR223W HUB1Q6Q546 73 aa1.58□□□□□ -2.16
UBP8YMR223W HHY1P39982 102 aa1.57□□□□□ -2.16
UBP8YMR223W RPC10P40422 70 aa1.57□□□□□ -2.16
UBP8YMR223W YPR108W-AQ3E7B3 70 aa1.56□□□□□ -2.16
UBP8YMR223W URA2P07259 2214 aaKnown RBP1.55□□□□□ -2.16
UBP8YMR223W AUA1P32450 94 aa1.55□□□□□ -2.16
UBP8YMR223W NUM1Q00402 2748 aa1.54□□□□□ -2.16
UBP8YMR223W TAO3P40468 2376 aa1.54□□□□□ -2.16
UBP8YMR223W YBL039W-BP0C268 59 aa1.54□□□□□ -2.16
UBP8YMR223W YIL102CP40488 101 aa1.54□□□□□ -2.16
UBP8YMR223W YJR107C-AP0CT86 78 aa1.53□□□□□ -2.16
UBP8YMR223W YMR141CP40211 102 aa1.53□□□□□ -2.16
UBP8YMR223W HUA1P40325 198 aa1.53□□□□□ -2.16
UBP8YMR223W YBR200W-AQ3E755 54 aa1.53□□□□□ -2.16
UBP8YMR223W IRA2P19158 3079 aa1.53□□□□□ -2.16
UBP8YMR223W HKR1P41809 1802 aa1.53□□□□□ -2.17
UBP8YMR223W TOR2P32600 2474 aaKnown RBP1.52□□□□□ -2.17
UBP8YMR223W TOR1P35169 2470 aa1.52□□□□□ -2.17
UBP8YMR223W YLR146W-AQ2V2P1 62 aa1.52□□□□□ -2.17
UBP8YMR223W YDR034W-BQ6Q5X2 51 aa1.52□□□□□ -2.17
UBP8YMR223W YMR001C-AQ8TGS9 76 aa1.52□□□□□ -2.17
UBP8YMR223W RPL38P49167 78 aaKnown RBP1.51□□□□□ -2.17
UBP8YMR223W TEL1P38110 2787 aa1.5□□□□□ -2.17
UBP8YMR223W IRA1P18963 3092 aa1.5□□□□□ -2.17
UBP8YMR223W YLR157W-DP0CE99 70 aa1.49□□□□□ -2.17
UBP8YMR223W YBR032WP38223 100 aa1.49□□□□□ -2.17
UBP8YMR223W YBR072C-AQ3E794 53 aa1.49□□□□□ -2.17
UBP8YMR223W YOR011W-AQ3E807 68 aa1.49□□□□□ -2.17
UBP8YMR223W YHR213W-BQ8TGK1 99 aa1.49□□□□□ -2.17
UBP8YMR223W FLO1P32768 1537 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms