RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C TAR1Q8TGM6 124 aa4.21□□□□□ -1.74
SSK1YLR006C ICS3P47034 131 aa4.21□□□□□ -1.74
SSK1YLR006C YHR125WP38831 101 aa4.19□□□□□ -1.74
SSK1YLR006C PMP3P87284 55 aa4.19□□□□□ -1.74
SSK1YLR006C RSM18P40033 138 aa4.18□□□□□ -1.74
SSK1YLR006C AIM19P40502 157 aa4.18□□□□□ -1.74
SSK1YLR006C PRP8P33334 2413 aaKnown RBP4.17□□□□□ -1.74
SSK1YLR006C QCR8P08525 94 aa4.17□□□□□ -1.74
SSK1YLR006C YDR381C-AQ3E6R5 114 aa4.16□□□□□ -1.74
SSK1YLR006C RPS11AP0CX47 156 aaKnown RBP4.15□□□□□ -1.74
SSK1YLR006C RPS11BP0CX48 156 aaKnown RBP4.15□□□□□ -1.74
SSK1YLR006C YDR115WQ04598 105 aa4.15□□□□□ -1.74
SSK1YLR006C PBA1Q05778 276 aa4.15□□□□□ -1.74
SSK1YLR006C PPT2Q12036 173 aa4.15□□□□□ -1.74
SSK1YLR006C YOR034C-AQ3E735 80 aa4.15□□□□□ -1.74
SSK1YLR006C YGL149WP53116 101 aa4.15□□□□□ -1.75
SSK1YLR006C YFL041W-AQ3E817 63 aa4.15□□□□□ -1.75
SSK1YLR006C KRE9P39005 276 aa4.13□□□□□ -1.75
SSK1YLR006C CRC1Q12289 327 aa4.13□□□□□ -1.75
SSK1YLR006C HOT13P36078 116 aa4.13□□□□□ -1.75
SSK1YLR006C YBR219CP38317 127 aa4.13□□□□□ -1.75
SSK1YLR006C RPL26AP05743 127 aaKnown RBP4.12□□□□□ -1.75
SSK1YLR006C YHR032W-AP0C5N6 59 aa4.12□□□□□ -1.75
SSK1YLR006C RGM1Q00453 211 aa4.12□□□□□ -1.75
SSK1YLR006C OST5Q92316 86 aa4.12□□□□□ -1.75
SSK1YLR006C MEC1P38111 2368 aa4.12□□□□□ -1.75
SSK1YLR006C VAM10Q08474 114 aa4.12□□□□□ -1.75
SSK1YLR006C YPL038W-AQ3E7B4 63 aa4.12□□□□□ -1.75
SSK1YLR006C YAL067W-AQ8TGK6 75 aa4.12□□□□□ -1.75
SSK1YLR006C YHR212W-AP0CX91 67 aa4.11□□□□□ -1.75
SSK1YLR006C RTC6O14464 93 aa4.1□□□□□ -1.75
SSK1YLR006C YCR001WP25347 104 aa4.1□□□□□ -1.75
SSK1YLR006C YLL006W-AQ3E814 58 aa4.1□□□□□ -1.75
SSK1YLR006C COX23P38824 151 aa4.1□□□□□ -1.75
SSK1YLR006C MPC2P38857 129 aa4.09□□□□□ -1.75
SSK1YLR006C YCR043CP25361 127 aa4.09□□□□□ -1.76
SSK1YLR006C RPL43AP0CX25 92 aaKnown RBP4.08□□□□□ -1.76
SSK1YLR006C RPL43BP0CX26 92 aa4.08□□□□□ -1.76
SSK1YLR006C YMR122W-AQ3E842 84 aa4.07□□□□□ -1.76
SSK1YLR006C COX12Q01519 83 aa4.06□□□□□ -1.76
SSK1YLR006C CMC4Q3E7A9 73 aa4.06□□□□□ -1.76
SSK1YLR006C YHL005CP38752 130 aa4.06□□□□□ -1.76
SSK1YLR006C YJR107C-AP0CT86 78 aa4.05□□□□□ -1.76
SSK1YLR006C IRC21Q04772 201 aa4.05□□□□□ -1.76
SSK1YLR006C YLR236CA0A023PZG4 107 aa4.04□□□□□ -1.76
SSK1YLR006C YFL067WP43537 175 aa4.04□□□□□ -1.76
SSK1YLR006C SPC1P46965 94 aa4.04□□□□□ -1.76
SSK1YLR006C ERI1P62651 68 aaKnown RBP4.04□□□□□ -1.76
SSK1YLR006C YGR240C-AQ3E786 66 aa4.04□□□□□ -1.76
SSK1YLR006C YAL065CO13511 128 aa4.03□□□□□ -1.76
SSK1YLR006C IGD1P43598 195 aa4.03□□□□□ -1.76
SSK1YLR006C YPR153WQ06537 140 aa4.01□□□□□ -1.77
SSK1YLR006C EDC1P53080 175 aaPredicted RBP4.01□□□□□ -1.77
SSK1YLR006C ATP18P81450 59 aa4.01□□□□□ -1.77
SSK1YLR006C MVB12P42939 101 aa4□□□□□ -1.77
SSK1YLR006C YLR285C-AQ3E771 56 aa4□□□□□ -1.77
SSK1YLR006C YGR035W-AQ45U48 73 aa4□□□□□ -1.77
SSK1YLR006C RPL38P49167 78 aaKnown RBP4□□□□□ -1.77
SSK1YLR006C YSY6P38374 65 aa3.99□□□□□ -1.77
SSK1YLR006C YJL197C-AP0C5P0 93 aa3.98□□□□□ -1.77
SSK1YLR006C AQY2P0CD90 149 aa3.98□□□□□ -1.77
SSK1YLR006C SGF11Q03067 99 aa3.98□□□□□ -1.77
SSK1YLR006C YPR195CQ06594 109 aa3.98□□□□□ -1.77
SSK1YLR006C TOR1P35169 2470 aa3.97□□□□□ -1.77
SSK1YLR006C RPL29P05747 59 aaPredicted RBP3.97□□□□□ -1.77
SSK1YLR006C RPC10P40422 70 aa3.97□□□□□ -1.77
SSK1YLR006C RPL26BP53221 127 aaKnown RBP3.96□□□□□ -1.78
SSK1YLR006C YGR121W-AQ3E816 71 aa3.96□□□□□ -1.78
SSK1YLR006C YPR010C-AA5Z2X5 72 aa3.95□□□□□ -1.78
SSK1YLR006C RPL36BO14455 100 aaKnown RBP3.95□□□□□ -1.78
SSK1YLR006C RPL33AP05744 107 aaKnown RBP3.95□□□□□ -1.78
SSK1YLR006C RPL36AP05745 100 aaPredicted RBP3.95□□□□□ -1.78
SSK1YLR006C YBL039W-BP0C268 59 aa3.95□□□□□ -1.78
SSK1YLR006C YFR009W-AP0C5M9 85 aa3.95□□□□□ -1.78
SSK1YLR006C RPL33BP41056 107 aaKnown RBP3.95□□□□□ -1.78
SSK1YLR006C RDS3Q06835 107 aaPredicted RBP3.95□□□□□ -1.78
SSK1YLR006C UTP20P35194 2493 aaKnown RBP3.95□□□□□ -1.78
SSK1YLR006C YER188C-AP0C0V2 99 aa3.95□□□□□ -1.78
SSK1YLR006C YCR095W-AQ3E787 52 aa3.95□□□□□ -1.78
SSK1YLR006C YNL162W-AQ3E7A8 72 aa3.95□□□□□ -1.78
SSK1YLR006C YOR314WQ12506 109 aa3.94□□□□□ -1.78
SSK1YLR006C YCL042WP25572 119 aa3.94□□□□□ -1.78
SSK1YLR006C COX8P04039 78 aa3.93□□□□□ -1.78
SSK1YLR006C YJL127C-BQ3E828 52 aa3.92□□□□□ -1.78
SSK1YLR006C NUM1Q00402 2748 aa3.92□□□□□ -1.78
SSK1YLR006C YEL014CP39999 101 aa3.92□□□□□ -1.78
SSK1YLR006C YMR122CQ03879 124 aa3.92□□□□□ -1.78
SSK1YLR006C YBR230W-AQ3E762 66 aa3.92□□□□□ -1.78
SSK1YLR006C SNA2P56508 79 aa3.91□□□□□ -1.78
SSK1YLR006C YIL156W-BQ2V2P4 73 aa3.91□□□□□ -1.78
SSK1YLR006C YDR246W-AQ3E763 66 aa3.91□□□□□ -1.78
SSK1YLR006C Q0032Q9ZZX7 96 aa3.91□□□□□ -1.78
SSK1YLR006C YBR027CP38220 110 aa3.9□□□□□ -1.79
SSK1YLR006C YLR162WQ06235 118 aa3.89□□□□□ -1.79
SSK1YLR006C YLL066W-BQ8TGJ7 56 aa3.88□□□□□ -1.79
SSK1YLR006C AIM4P38305 123 aaPredicted RBP3.87□□□□□ -1.79
SSK1YLR006C YHR213W-BQ8TGK1 99 aa3.87□□□□□ -1.79
SSK1YLR006C YNL042W-BQ3E7Z2 85 aa3.86□□□□□ -1.79
SSK1YLR006C CUP1-1P0CX80 61 aa3.86□□□□□ -1.79
SSK1YLR006C CUP1-2P0CX81 61 aa3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 75.2 ms