RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	YCR050C	P25630	102 aa		3.88	□□□□□ -1.79
TIF1	YKR059W	YBR090C	P38253	122 aa		3.88	□□□□□ -1.79
TIF1	YKR059W	PAU16	P35994	123 aa		3.87	□□□□□ -1.79
TIF1	YKR059W	HSP10	P38910	106 aa		3.86	□□□□□ -1.79
TIF1	YKR059W	RGM1	Q00453	211 aa		3.86	□□□□□ -1.79
TIF1	YKR059W	ENV10	Q99382	181 aa		3.86	□□□□□ -1.79
TIF1	YKR059W	YER039C-A	P0CD97	72 aa		3.85	□□□□□ -1.79
TIF1	YKR059W	RPB11	P38902	120 aa		3.85	□□□□□ -1.79
TIF1	YKR059W	YAR029W	P39549	74 aa		3.85	□□□□□ -1.79
TIF1	YKR059W	YFL065C	P43539	102 aa		3.85	□□□□□ -1.79
TIF1	YKR059W	DCV1	P43595	202 aa		3.85	□□□□□ -1.79
TIF1	YKR059W	YPR203W	Q08994	102 aa		3.85	□□□□□ -1.79
TIF1	YKR059W	YLR363W-A	Q3E747	85 aa		3.85	□□□□□ -1.79
TIF1	YKR059W	HMRA1	P0CY11	126 aa		3.84	□□□□□ -1.79
TIF1	YKR059W	PAU7	P39545	55 aa		3.84	□□□□□ -1.79
TIF1	YKR059W	YNL198C	P40166	100 aa		3.84	□□□□□ -1.79
TIF1	YKR059W	AIM19	P40502	157 aa		3.84	□□□□□ -1.79
TIF1	YKR059W	SNA2	P56508	79 aa		3.84	□□□□□ -1.79
TIF1	YKR059W	SOM1	Q05676	74 aa		3.84	□□□□□ -1.79
TIF1	YKR059W	YDR010C	Q12426	110 aa		3.84	□□□□□ -1.79
TIF1	YKR059W	YMR175W-A	Q3E766	64 aa		3.84	□□□□□ -1.79
TIF1	YKR059W	ATX1	P38636	73 aa		3.83	□□□□□ -1.8
TIF1	YKR059W	YPR153W	Q06537	140 aa		3.83	□□□□□ -1.8
TIF1	YKR059W	YIL102C-A	Q2V2P5	75 aa		3.83	□□□□□ -1.8
TIF1	YKR059W	YGL230C	P53074	147 aa		3.82	□□□□□ -1.8
TIF1	YKR059W	YAL064W	P39711	94 aa		3.81	□□□□□ -1.8
TIF1	YKR059W	YGL041C-B	Q3E750	60 aa		3.81	□□□□□ -1.8
TIF1	YKR059W	YHL042W	P38729	150 aa		3.8	□□□□□ -1.8
TIF1	YKR059W	ECM12	O13529	151 aa		3.79	□□□□□ -1.8
TIF1	YKR059W	FYV5	P25585	152 aa		3.79	□□□□□ -1.8
TIF1	YKR059W	QCR10	P37299	77 aa		3.79	□□□□□ -1.8
TIF1	YKR059W	YEL014C	P39999	101 aa		3.78	□□□□□ -1.8
TIF1	YKR059W	YHR086W-A	Q3E746	53 aa		3.78	□□□□□ -1.8
TIF1	YKR059W	YBR219C	P38317	127 aa		3.76	□□□□□ -1.81
TIF1	YKR059W	YKL023C-A	Q2V2P3	75 aa		3.76	□□□□□ -1.81
TIF1	YKR059W	PFY1	P07274	126 aa		3.75	□□□□□ -1.81
TIF1	YKR059W	RPA12	P32529	125 aa	Known RBP	3.75	□□□□□ -1.81
TIF1	YKR059W	MGR2	Q02889	113 aa		3.75	□□□□□ -1.81
TIF1	YKR059W	YLR296W	Q05898	108 aa		3.75	□□□□□ -1.81
TIF1	YKR059W	YAL065C	O13511	128 aa		3.74	□□□□□ -1.81
TIF1	YKR059W	NHP2	P32495	156 aa	Predicted RBP	3.74	□□□□□ -1.81
TIF1	YKR059W	YEL008W	P40001	126 aa		3.74	□□□□□ -1.81
TIF1	YKR059W	CWP2	P43497	92 aa		3.74	□□□□□ -1.81
TIF1	YKR059W	TOS6	P48560	102 aa		3.74	□□□□□ -1.81
TIF1	YKR059W	RPS22B	Q3E7Y3	130 aa	Known RBP	3.74	□□□□□ -1.81
TIF1	YKR059W	YGL010W	P25338	174 aa		3.73	□□□□□ -1.81
TIF1	YKR059W	YCR085W	P25650	117 aa		3.73	□□□□□ -1.81
TIF1	YKR059W	QCR8	P08525	94 aa		3.72	□□□□□ -1.81
TIF1	YKR059W	YOR008C-A	Q3E7B9	74 aa		3.72	□□□□□ -1.81
TIF1	YKR059W	YFL041W-A	Q3E817	63 aa		3.72	□□□□□ -1.81
TIF1	YKR059W	YGR164W	P53291	111 aa		3.71	□□□□□ -1.82
TIF1	YKR059W	CMC4	Q3E7A9	73 aa		3.71	□□□□□ -1.82
TIF1	YKR059W	TOM6	P33448	61 aa		3.7	□□□□□ -1.82
TIF1	YKR059W	YMR103C	Q04436	120 aa		3.7	□□□□□ -1.82
TIF1	YKR059W	YLR162W	Q06235	118 aa		3.7	□□□□□ -1.82
TIF1	YKR059W	HPA2	Q06592	156 aa		3.7	□□□□□ -1.82
TIF1	YKR059W	YDR119W-A	Q2V2P9	66 aa		3.69	□□□□□ -1.82
TIF1	YKR059W	AQY2	P0CD90	149 aa		3.68	□□□□□ -1.82
TIF1	YKR059W	YGL149W	P53116	101 aa		3.68	□□□□□ -1.82
TIF1	YKR059W	YKL044W	P36092	106 aa		3.67	□□□□□ -1.82
TIF1	YKR059W	YDR042C	Q03205	200 aa		3.66	□□□□□ -1.82
TIF1	YKR059W	YOR376W-A	Q3E805	51 aa		3.64	□□□□□ -1.83
TIF1	YKR059W	Q0032	Q9ZZX7	96 aa		3.64	□□□□□ -1.83
TIF1	YKR059W	TDA2	P40045	126 aa		3.63	□□□□□ -1.83
TIF1	YKR059W	YIL014C-A	Q02598	104 aa		3.63	□□□□□ -1.83
TIF1	YKR059W	YPL038W-A	Q3E7B4	63 aa		3.63	□□□□□ -1.83
TIF1	YKR059W	KSH1	Q8TGJ3	72 aa		3.63	□□□□□ -1.83
TIF1	YKR059W	YBL039W-B	P0C268	59 aa		3.62	□□□□□ -1.83
TIF1	YKR059W	UBC4	P15731	148 aa		3.61	□□□□□ -1.83
TIF1	YKR059W	RSM19	P53733	91 aa	Predicted RBP	3.61	□□□□□ -1.83
TIF1	YKR059W	MVB12	P42939	101 aa		3.6	□□□□□ -1.83
TIF1	YKR059W	COA3	Q3E7B2	85 aa		3.6	□□□□□ -1.83
TIF1	YKR059W	LSM6	Q06406	86 aa	Known RBP	3.59	□□□□□ -1.83
TIF1	YKR059W	HMRA2	P0CY13	119 aa		3.58	□□□□□ -1.84
TIF1	YKR059W	YDR381C-A	Q3E6R5	114 aa		3.58	□□□□□ -1.84
TIF1	YKR059W	RPL36B	O14455	100 aa	Known RBP	3.57	□□□□□ -1.84
TIF1	YKR059W	RPL36A	P05745	100 aa	Predicted RBP	3.57	□□□□□ -1.84
TIF1	YKR059W	RPL29	P05747	59 aa	Predicted RBP	3.57	□□□□□ -1.84
TIF1	YKR059W	YGR121W-A	Q3E816	71 aa		3.57	□□□□□ -1.84
TIF1	YKR059W	SHU1	P38751	150 aa		3.56	□□□□□ -1.84
TIF1	YKR059W	YBR027C	P38220	110 aa		3.54	□□□□□ -1.84
TIF1	YKR059W	YSY6	P38374	65 aa		3.54	□□□□□ -1.84
TIF1	YKR059W	YNL190W	P53872	204 aa		3.54	□□□□□ -1.84
TIF1	YKR059W	YPL261C	Q08976	102 aa		3.52	□□□□□ -1.85
TIF1	YKR059W	YER187W	P40102	141 aa		3.51	□□□□□ -1.85
TIF1	YKR059W	OST5	Q92316	86 aa		3.5	□□□□□ -1.85
TIF1	YKR059W	MIC10	Q96VH5	97 aa		3.5	□□□□□ -1.85
TIF1	YKR059W	YGL014C-A	P0C5N1	53 aa		3.49	□□□□□ -1.85
TIF1	YKR059W	RSM18	P40033	138 aa		3.48	□□□□□ -1.85
TIF1	YKR059W	HUR1	P45820	110 aa		3.48	□□□□□ -1.85
TIF1	YKR059W	RPL37B	P51402	88 aa	Known RBP	3.48	□□□□□ -1.85
TIF1	YKR059W	DDR2	P89113	61 aa		3.48	□□□□□ -1.85
TIF1	YKR059W	YNL042W-B	Q3E7Z2	85 aa		3.48	□□□□□ -1.85
TIF1	YKR059W	YLL006W-A	Q3E814	58 aa		3.47	□□□□□ -1.85
TIF1	YKR059W	ICS3	P47034	131 aa		3.46	□□□□□ -1.86
TIF1	YKR059W	ICY1	Q04329	127 aa		3.46	□□□□□ -1.86
TIF1	YKR059W	YMR122C	Q03879	124 aa		3.45	□□□□□ -1.86
TIF1	YKR059W	AIM4	P38305	123 aa	Predicted RBP	3.44	□□□□□ -1.86
TIF1	YKR059W	YHL005C	P38752	130 aa		3.44	□□□□□ -1.86
TIF1	YKR059W	MRPS12	P53732	153 aa		3.44	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 40.7 ms