RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C YOL118CQ08259 102 aa0.72□□□□□ -2.29
YPT52YKR014C YLR146W-AQ2V2P1 62 aa0.72□□□□□ -2.29
YPT52YKR014C YOR192C-CQ3E736 78 aa0.72□□□□□ -2.29
YPT52YKR014C YHR213W-AQ8TGT4 77 aa0.72□□□□□ -2.29
YPT52YKR014C FPR2P32472 135 aa0.71□□□□□ -2.3
YPT52YKR014C MRPL38P35996 138 aaPredicted RBP0.71□□□□□ -2.3
YPT52YKR014C GCV3P39726 170 aaPredicted RBP0.71□□□□□ -2.3
YPT52YKR014C YER137CP40083 148 aaKnown RBP0.71□□□□□ -2.3
YPT52YKR014C IMP2P46972 177 aa0.71□□□□□ -2.3
YPT52YKR014C YMR082CQ04276 118 aa0.71□□□□□ -2.3
YPT52YKR014C COX19Q3E731 98 aa0.71□□□□□ -2.3
YPT52YKR014C COA2Q3E823 68 aa0.71□□□□□ -2.3
YPT52YKR014C BLM10P43583 2143 aa0.71□□□□□ -2.3
YPT52YKR014C AUA1P32450 94 aa0.7□□□□□ -2.3
YPT52YKR014C PAU4P53427 120 aa0.7□□□□□ -2.3
YPT52YKR014C COX12Q01519 83 aa0.7□□□□□ -2.3
YPT52YKR014C LSM6Q06406 86 aaKnown RBP0.7□□□□□ -2.3
YPT52YKR014C POC4Q12245 148 aaPredicted RBP0.7□□□□□ -2.3
YPT52YKR014C YPR145C-AQ2V2P0 78 aa0.7□□□□□ -2.3
YPT52YKR014C YLR342W-AQ3E810 57 aa0.7□□□□□ -2.3
YPT52YKR014C YCR075W-AQ3E830 75 aa0.7□□□□□ -2.3
YPT52YKR014C YPR010C-AA5Z2X5 72 aa0.69□□□□□ -2.3
YPT52YKR014C PAU1P0CE88 120 aa0.69□□□□□ -2.3
YPT52YKR014C PAU14P0CE89 120 aa0.69□□□□□ -2.3
YPT52YKR014C PAU6P0CE90 120 aa0.69□□□□□ -2.3
YPT52YKR014C PAU18P0CE91 120 aa0.69□□□□□ -2.3
YPT52YKR014C PAU8P0CE92 120 aa0.69□□□□□ -2.3
YPT52YKR014C PAU11P0CE93 120 aa0.69□□□□□ -2.3
YPT52YKR014C RPS11AP0CX47 156 aaKnown RBP0.69□□□□□ -2.3
YPT52YKR014C RPS11BP0CX48 156 aaKnown RBP0.69□□□□□ -2.3
YPT52YKR014C SRB6P32570 121 aa0.69□□□□□ -2.3
YPT52YKR014C PAU13P38725 120 aa0.69□□□□□ -2.3
YPT52YKR014C YHR173CP38864 112 aa0.69□□□□□ -2.3
YPT52YKR014C PAU7P39545 55 aa0.69□□□□□ -2.3
YPT52YKR014C EMC5P40540 141 aa0.69□□□□□ -2.3
YPT52YKR014C PAU5P43575 122 aa0.69□□□□□ -2.3
YPT52YKR014C ERI1P62651 68 aaKnown RBP0.69□□□□□ -2.3
YPT52YKR014C PAU10Q03050 120 aa0.69□□□□□ -2.3
YPT52YKR014C PAU20Q08322 120 aa0.69□□□□□ -2.3
YPT52YKR014C YOR105WQ08504 108 aa0.69□□□□□ -2.3
YPT52YKR014C YDR010CQ12426 110 aa0.69□□□□□ -2.3
YPT52YKR014C PAU9Q3E770 120 aa0.69□□□□□ -2.3
YPT52YKR014C VMA9Q3E7B6 73 aa0.69□□□□□ -2.3
YPT52YKR014C HMRA1P0CY11 126 aa0.68□□□□□ -2.3
YPT52YKR014C BPH1P25356 2167 aa0.68□□□□□ -2.3
YPT52YKR014C PAU16P35994 123 aa0.68□□□□□ -2.3
YPT52YKR014C LSM2P38203 95 aaKnown RBP0.68□□□□□ -2.3
YPT52YKR014C SNU13P39990 126 aaKnown RBP0.68□□□□□ -2.3
YPT52YKR014C SPI1P40092 148 aa0.68□□□□□ -2.3
YPT52YKR014C PAU15P40585 124 aa0.68□□□□□ -2.3
YPT52YKR014C SGF11Q03067 99 aa0.68□□□□□ -2.3
YPT52YKR014C YGL194C-AQ2V2P6 80 aa0.68□□□□□ -2.3
YPT52YKR014C YOR011W-AQ3E807 68 aa0.68□□□□□ -2.3
YPT52YKR014C SPC1P46965 94 aa0.67□□□□□ -2.3
YPT52YKR014C TOM7P53507 60 aa0.67□□□□□ -2.3
YPT52YKR014C PMP3P87284 55 aa0.67□□□□□ -2.3
YPT52YKR014C ZEO1Q08245 113 aa0.67□□□□□ -2.3
YPT52YKR014C YCL001W-BQ96VH2 84 aa0.67□□□□□ -2.3
YPT52YKR014C YLR255CO13574 117 aa0.66□□□□□ -2.3
YPT52YKR014C UBC5P15732 148 aa0.66□□□□□ -2.3
YPT52YKR014C YMR103CQ04436 120 aa0.66□□□□□ -2.3
YPT52YKR014C YBR200W-AQ3E755 54 aa0.66□□□□□ -2.3
YPT52YKR014C YBR072C-AQ3E794 53 aa0.66□□□□□ -2.3
YPT52YKR014C YMR122W-AQ3E842 84 aa0.66□□□□□ -2.3
YPT52YKR014C UTP20P35194 2493 aaKnown RBP0.66□□□□□ -2.3
YPT52YKR014C TOS6P48560 102 aa0.65□□□□□ -2.31
YPT52YKR014C YGR025WP53216 100 aa0.65□□□□□ -2.31
YPT52YKR014C YDR210WQ03482 75 aa0.65□□□□□ -2.31
YPT52YKR014C YMR175W-AQ3E766 64 aa0.65□□□□□ -2.31
YPT52YKR014C YNR034W-AQ3E841 98 aa0.65□□□□□ -2.31
YPT52YKR014C MIC10Q96VH5 97 aa0.65□□□□□ -2.31
YPT52YKR014C ECM12O13529 151 aa0.64□□□□□ -2.31
YPT52YKR014C UBC4P15731 148 aa0.64□□□□□ -2.31
YPT52YKR014C YDR029WQ12111 104 aa0.64□□□□□ -2.31
YPT52YKR014C YPL038W-AQ3E7B4 63 aa0.64□□□□□ -2.31
YPT52YKR014C YBL039W-BP0C268 59 aa0.63□□□□□ -2.31
YPT52YKR014C YDR034C-AP0C289 58 aa0.63□□□□□ -2.31
YPT52YKR014C YBR090CP38253 122 aa0.63□□□□□ -2.31
YPT52YKR014C SHU1P38751 150 aa0.63□□□□□ -2.31
YPT52YKR014C RPC10P40422 70 aa0.63□□□□□ -2.31
YPT52YKR014C AIM19P40502 157 aa0.63□□□□□ -2.31
YPT52YKR014C SNA2P56508 79 aa0.63□□□□□ -2.31
YPT52YKR014C YDR042CQ03205 200 aa0.63□□□□□ -2.31
YPT52YKR014C YOR008C-AQ3E7B9 74 aa0.63□□□□□ -2.31
YPT52YKR014C YLL066W-BQ8TGJ7 56 aa0.63□□□□□ -2.31
YPT52YKR014C YAL065CO13511 128 aa0.62□□□□□ -2.31
YPT52YKR014C SSS1P35179 80 aa0.62□□□□□ -2.31
YPT52YKR014C RPS29BP41058 56 aaKnown RBP0.62□□□□□ -2.31
YPT52YKR014C Q0032Q9ZZX7 96 aa0.62□□□□□ -2.31
YPT52YKR014C RPL29P05747 59 aaPredicted RBP0.61□□□□□ -2.31
YPT52YKR014C CWP2P43497 92 aa0.61□□□□□ -2.31
YPT52YKR014C YNL190WP53872 204 aa0.61□□□□□ -2.31
YPT52YKR014C FYV7Q12247 151 aa0.61□□□□□ -2.31
YPT52YKR014C YKL023C-AQ2V2P3 75 aa0.61□□□□□ -2.31
YPT52YKR014C YIL134C-AQ45U18 67 aa0.61□□□□□ -2.31
YPT52YKR014C MSL1P40567 111 aaPredicted RBP0.6□□□□□ -2.31
YPT52YKR014C YNL042W-BQ3E7Z2 85 aa0.6□□□□□ -2.31
YPT52YKR014C RRT15Q3E811 62 aa0.6□□□□□ -2.31
YPT52YKR014C YLL006W-AQ3E814 58 aa0.6□□□□□ -2.31
YPT52YKR014C PAI3P01094 68 aa0.59□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms