RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W HMRA2P0CY13 119 aa3.35□□□□□ -1.87
ABF1YKL112W YFL067WP43537 175 aa3.35□□□□□ -1.87
ABF1YKL112W EDC1P53080 175 aaPredicted RBP3.35□□□□□ -1.87
ABF1YKL112W IRC21Q04772 201 aa3.35□□□□□ -1.87
ABF1YKL112W YMR254CQ04838 102 aa3.35□□□□□ -1.87
ABF1YKL112W ECM19Q06011 112 aa3.35□□□□□ -1.87
ABF1YKL112W YMR030W-AQ3E760 96 aa3.35□□□□□ -1.87
ABF1YKL112W YCR095W-AQ3E787 52 aa3.35□□□□□ -1.87
ABF1YKL112W YGR269WP40326 108 aa3.34□□□□□ -1.87
ABF1YKL112W IGD1P43598 195 aa3.34□□□□□ -1.88
ABF1YKL112W YDR115WQ04598 105 aa3.34□□□□□ -1.88
ABF1YKL112W YIL156W-BQ2V2P4 73 aa3.34□□□□□ -1.88
ABF1YKL112W QCR8P08525 94 aa3.33□□□□□ -1.88
ABF1YKL112W MRPL27P36526 146 aaPredicted RBP3.33□□□□□ -1.88
ABF1YKL112W YLR285C-AQ3E771 56 aa3.33□□□□□ -1.88
ABF1YKL112W YPR096CO13587 100 aa3.32□□□□□ -1.88
ABF1YKL112W YHR022CP38763 256 aa3.32□□□□□ -1.88
ABF1YKL112W YHR032W-AP0C5N6 59 aa3.32□□□□□ -1.88
ABF1YKL112W HOT13P36078 116 aa3.32□□□□□ -1.88
ABF1YKL112W YNR077CP53758 84 aa3.31□□□□□ -1.88
ABF1YKL112W MRX7P53869 86 aa3.31□□□□□ -1.88
ABF1YKL112W CMC4Q3E7A9 73 aa3.31□□□□□ -1.88
ABF1YKL112W PAU7P39545 55 aa3.3□□□□□ -1.88
ABF1YKL112W POR2P40478 281 aa3.3□□□□□ -1.88
ABF1YKL112W SIP18P50263 79 aa3.3□□□□□ -1.88
ABF1YKL112W SNA2P56508 79 aa3.3□□□□□ -1.88
ABF1YKL112W YDR010CQ12426 110 aa3.3□□□□□ -1.88
ABF1YKL112W YBR027CP38220 110 aa3.29□□□□□ -1.88
ABF1YKL112W FIT2Q08906 153 aa3.29□□□□□ -1.88
ABF1YKL112W NOP10Q6Q547 58 aaPredicted RBP3.29□□□□□ -1.88
ABF1YKL112W YDR182W-AQ3E796 67 aa3.28□□□□□ -1.88
ABF1YKL112W COA2Q3E823 68 aa3.28□□□□□ -1.88
ABF1YKL112W YDL022C-AP0C5L6 82 aa3.27□□□□□ -1.89
ABF1YKL112W RPS30AP0CX33 63 aaKnown RBP3.27□□□□□ -1.89
ABF1YKL112W RPS30BP0CX34 63 aaKnown RBP3.27□□□□□ -1.89
ABF1YKL112W YER084WP40057 128 aa3.27□□□□□ -1.89
ABF1YKL112W YIL163CP40448 117 aa3.27□□□□□ -1.89
ABF1YKL112W YOL166W-AQ8TGJ1 51 aa3.27□□□□□ -1.89
ABF1YKL112W KRE9P39005 276 aa3.26□□□□□ -1.89
ABF1YKL112W PRM7Q12459 698 aa3.26□□□□□ -1.89
ABF1YKL112W BSC4P53841 131 aa3.25□□□□□ -1.89
ABF1YKL112W YEL014CP39999 101 aa3.24□□□□□ -1.89
ABF1YKL112W YPR195CQ06594 109 aa3.24□□□□□ -1.89
ABF1YKL112W YOR034C-AQ3E735 80 aa3.24□□□□□ -1.89
ABF1YKL112W YAL067W-AQ8TGK6 75 aa3.24□□□□□ -1.89
ABF1YKL112W YLR236CA0A023PZG4 107 aa3.24□□□□□ -1.89
ABF1YKL112W YJL027CP47063 138 aaPredicted RBP3.24□□□□□ -1.89
ABF1YKL112W COA3Q3E7B2 85 aa3.24□□□□□ -1.89
ABF1YKL112W COX9P07255 59 aa3.22□□□□□ -1.89
ABF1YKL112W YNL042W-BQ3E7Z2 85 aa3.22□□□□□ -1.89
ABF1YKL112W YCL048W-AQ2V2Q2 79 aa3.22□□□□□ -1.89
ABF1YKL112W YNL190WP53872 204 aa3.21□□□□□ -1.9
ABF1YKL112W COX8P04039 78 aa3.2□□□□□ -1.9
ABF1YKL112W RPS11AP0CX47 156 aaKnown RBP3.19□□□□□ -1.9
ABF1YKL112W RPS11BP0CX48 156 aaKnown RBP3.19□□□□□ -1.9
ABF1YKL112W YKR032WP36127 104 aa3.19□□□□□ -1.9
ABF1YKL112W DAD4P69851 72 aa3.19□□□□□ -1.9
ABF1YKL112W YOL085CQ99345 113 aa3.19□□□□□ -1.9
ABF1YKL112W RPL33BP41056 107 aaKnown RBP3.18□□□□□ -1.9
ABF1YKL112W YMR007WQ03675 126 aa3.18□□□□□ -1.9
ABF1YKL112W CCW12Q12127 133 aa3.17□□□□□ -1.9
ABF1YKL112W YDR210WQ03482 75 aa3.16□□□□□ -1.9
ABF1YKL112W YBR219CP38317 127 aa3.15□□□□□ -1.9
ABF1YKL112W YCR001WP25347 104 aa3.14□□□□□ -1.91
ABF1YKL112W YGL014C-AP0C5N1 53 aa3.14□□□□□ -1.91
ABF1YKL112W SHU1P38751 150 aa3.14□□□□□ -1.91
ABF1YKL112W MRPS12P53732 153 aa3.13□□□□□ -1.91
ABF1YKL112W ATP17Q06405 101 aa3.13□□□□□ -1.91
ABF1YKL112W HUB1Q6Q546 73 aa3.13□□□□□ -1.91
ABF1YKL112W LCL2Q08045 131 aa3.12□□□□□ -1.91
ABF1YKL112W RPL39P04650 51 aa3.12□□□□□ -1.91
ABF1YKL112W AUA1P32450 94 aa3.12□□□□□ -1.91
ABF1YKL112W HUA1P40325 198 aa3.11□□□□□ -1.91
ABF1YKL112W MGR2Q02889 113 aa3.1□□□□□ -1.91
ABF1YKL112W AQY2P0CD90 149 aa3.09□□□□□ -1.91
ABF1YKL112W GIS2P53849 153 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
ABF1YKL112W YNL122CP53921 115 aaPredicted RBP3.08□□□□□ -1.92
ABF1YKL112W YJR107C-AP0CT86 78 aa3.07□□□□□ -1.92
ABF1YKL112W RPL38P49167 78 aaKnown RBP3.07□□□□□ -1.92
ABF1YKL112W YMR122W-AQ3E842 84 aa3.07□□□□□ -1.92
ABF1YKL112W TOS6P48560 102 aa3.06□□□□□ -1.92
ABF1YKL112W SGF11Q03067 99 aa3.06□□□□□ -1.92
ABF1YKL112W YMR001C-AQ8TGS9 76 aa3.05□□□□□ -1.92
ABF1YKL112W TOM7P53507 60 aa3.05□□□□□ -1.92
ABF1YKL112W YMR105W-AQ8TGS8 64 aa3.05□□□□□ -1.92
ABF1YKL112W RPL33AP05744 107 aaKnown RBP3.04□□□□□ -1.92
ABF1YKL112W YLR255CO13574 117 aa3.04□□□□□ -1.92
ABF1YKL112W YLR157W-DP0CE99 70 aa3.04□□□□□ -1.92
ABF1YKL112W YHR212W-AP0CX91 67 aa3.04□□□□□ -1.92
ABF1YKL112W YGL041C-BQ3E750 60 aa3.03□□□□□ -1.92
ABF1YKL112W HUG1Q6Q5K6 68 aa3.03□□□□□ -1.92
ABF1YKL112W YIL102CP40488 101 aa3.02□□□□□ -1.93
ABF1YKL112W YJL144WP47009 104 aa3.01□□□□□ -1.93
ABF1YKL112W ATP18P81450 59 aa3.01□□□□□ -1.93
ABF1YKL112W YHR007C-AQ07074 71 aa3.01□□□□□ -1.93
ABF1YKL112W YBR201C-AQ2V2Q3 67 aa3.01□□□□□ -1.93
ABF1YKL112W SDH6Q3E785 79 aa3.01□□□□□ -1.93
ABF1YKL112W VAM10Q08474 114 aa3□□□□□ -1.93
ABF1YKL112W YPR108W-AQ3E7B3 70 aa2.99□□□□□ -1.93
ABF1YKL112W TAR1Q8TGM6 124 aa2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms