RNA–Protein interactions for RNA: YKL043W

PHD1, Transcript of Transcriptional activator that enhances pseudohyphal growth, yeastyeast

Gene PHD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHD1YKL043W YMR244WQ04018 355 aa2.26□□□□□ -2.05
PHD1YKL043W YDR114CQ04597 100 aa2.26□□□□□ -2.05
PHD1YKL043W YDL241WQ07738 123 aa2.26□□□□□ -2.05
PHD1YKL043W RRT15Q3E811 62 aa2.26□□□□□ -2.05
PHD1YKL043W YBR126W-AQ8TGU7 68 aa2.26□□□□□ -2.05
PHD1YKL043W YER188C-AP0C0V2 99 aa2.25□□□□□ -2.05
PHD1YKL043W YFR009W-AP0C5M9 85 aa2.25□□□□□ -2.05
PHD1YKL043W YOR268CQ08734 132 aa2.25□□□□□ -2.05
PHD1YKL043W YLL006W-AQ3E814 58 aa2.25□□□□□ -2.05
PHD1YKL043W YML100W-AQ8TGT0 57 aa2.25□□□□□ -2.05
PHD1YKL043W OST5Q92316 86 aa2.25□□□□□ -2.05
PHD1YKL043W COX23P38824 151 aa2.24□□□□□ -2.05
PHD1YKL043W EDC1P53080 175 aaPredicted RBP2.24□□□□□ -2.05
PHD1YKL043W PMP3P87284 55 aa2.24□□□□□ -2.05
PHD1YKL043W VAM10Q08474 114 aa2.24□□□□□ -2.05
PHD1YKL043W HUB1Q6Q546 73 aa2.24□□□□□ -2.05
PHD1YKL043W UTP20P35194 2493 aaKnown RBP2.23□□□□□ -2.05
PHD1YKL043W RPL39P04650 51 aa2.23□□□□□ -2.05
PHD1YKL043W YCR043CP25361 127 aa2.23□□□□□ -2.05
PHD1YKL043W YIR020CP40575 100 aa2.23□□□□□ -2.05
PHD1YKL043W SED1Q01589 338 aa2.23□□□□□ -2.05
PHD1YKL043W TMC1Q08422 150 aaPredicted RBP2.23□□□□□ -2.05
PHD1YKL043W YOR034C-AQ3E735 80 aa2.23□□□□□ -2.05
PHD1YKL043W YLR307C-AQ3E825 87 aa2.23□□□□□ -2.05
PHD1YKL043W RPS30AP0CX33 63 aaKnown RBP2.22□□□□□ -2.05
PHD1YKL043W RPS30BP0CX34 63 aaKnown RBP2.22□□□□□ -2.05
PHD1YKL043W YEL045CP32616 141 aa2.22□□□□□ -2.05
PHD1YKL043W SPO24Q3E752 67 aa2.22□□□□□ -2.05
PHD1YKL043W YCL042WP25572 119 aa2.21□□□□□ -2.06
PHD1YKL043W EDC2P40023 145 aaPredicted RBP2.21□□□□□ -2.06
PHD1YKL043W RPL38P49167 78 aaKnown RBP2.21□□□□□ -2.06
PHD1YKL043W YMR122W-AQ3E842 84 aa2.21□□□□□ -2.06
PHD1YKL043W YBR219CP38317 127 aa2.2□□□□□ -2.06
PHD1YKL043W YGL034CP53186 121 aa2.2□□□□□ -2.06
PHD1YKL043W MRPS8Q03799 155 aa2.2□□□□□ -2.06
PHD1YKL043W HOR7Q05827 59 aa2.2□□□□□ -2.06
PHD1YKL043W YPR153WQ06537 140 aa2.2□□□□□ -2.06
PHD1YKL043W YOL085CQ99345 113 aa2.2□□□□□ -2.06
PHD1YKL043W YCR001WP25347 104 aa2.19□□□□□ -2.06
PHD1YKL043W FYV5P25585 152 aa2.19□□□□□ -2.06
PHD1YKL043W YER135CP40082 130 aa2.19□□□□□ -2.06
PHD1YKL043W YGL088WP53151 121 aa2.19□□□□□ -2.06
PHD1YKL043W LIP1Q03579 150 aa2.19□□□□□ -2.06
PHD1YKL043W RDS3Q06835 107 aaPredicted RBP2.19□□□□□ -2.06
PHD1YKL043W YCL048W-AQ2V2Q2 79 aa2.19□□□□□ -2.06
PHD1YKL043W YNL162W-AQ3E7A8 72 aa2.19□□□□□ -2.06
PHD1YKL043W YBR182C-AQ8TGU6 64 aa2.19□□□□□ -2.06
PHD1YKL043W Q0297Q9ZZV8 51 aa2.19□□□□□ -2.06
PHD1YKL043W YPR010C-AA5Z2X5 72 aa2.18□□□□□ -2.06
PHD1YKL043W MVB12P42939 101 aa2.18□□□□□ -2.06
PHD1YKL043W SPC1P46965 94 aa2.18□□□□□ -2.06
PHD1YKL043W YGR025WP53216 100 aa2.18□□□□□ -2.06
PHD1YKL043W URA2P07259 2214 aaKnown RBP2.18□□□□□ -2.06
PHD1YKL043W DIF1O13577 133 aa2.17□□□□□ -2.06
PHD1YKL043W YOL013W-AP0C272 63 aaPredicted RBP2.17□□□□□ -2.06
PHD1YKL043W RPS11AP0CX47 156 aaKnown RBP2.17□□□□□ -2.06
PHD1YKL043W RPS11BP0CX48 156 aaKnown RBP2.17□□□□□ -2.06
PHD1YKL043W YBL081WP38180 368 aaKnown RBP2.17□□□□□ -2.06
PHD1YKL043W YOL014WQ08110 124 aa2.17□□□□□ -2.06
PHD1YKL043W YGR240C-AQ3E786 66 aa2.17□□□□□ -2.06
PHD1YKL043W YCR095W-AQ3E787 52 aa2.17□□□□□ -2.06
PHD1YKL043W YOR376W-AQ3E805 51 aa2.17□□□□□ -2.06
PHD1YKL043W YHR213W-BQ8TGK1 99 aa2.17□□□□□ -2.06
PHD1YKL043W YBL039W-BP0C268 59 aa2.16□□□□□ -2.06
PHD1YKL043W RPC10P40422 70 aa2.16□□□□□ -2.06
PHD1YKL043W YGL149WP53116 101 aa2.16□□□□□ -2.06
PHD1YKL043W ECM19Q06011 112 aa2.16□□□□□ -2.06
PHD1YKL043W YPR013CQ12145 317 aa2.16□□□□□ -2.06
PHD1YKL043W YBR230W-AQ3E762 66 aa2.16□□□□□ -2.06
PHD1YKL043W SDH6Q3E785 79 aa2.16□□□□□ -2.06
PHD1YKL043W YOR011W-AQ3E807 68 aa2.16□□□□□ -2.06
PHD1YKL043W YHR125WP38831 101 aa2.15□□□□□ -2.07
PHD1YKL043W YJL133C-AQ3E7A3 74 aa2.15□□□□□ -2.07
PHD1YKL043W YMR001C-AQ8TGS9 76 aa2.15□□□□□ -2.07
PHD1YKL043W YAR023CD6VPM8 179 aa2.14□□□□□ -2.07
PHD1YKL043W AQY2P0CD90 149 aa2.14□□□□□ -2.07
PHD1YKL043W WWM1P43582 211 aaKnown RBP2.14□□□□□ -2.07
PHD1YKL043W ATP17Q06405 101 aa2.14□□□□□ -2.07
PHD1YKL043W YNL042W-BQ3E7Z2 85 aa2.14□□□□□ -2.07
PHD1YKL043W YJL127C-BQ3E828 52 aa2.14□□□□□ -2.07
PHD1YKL043W YLR157W-DP0CE99 70 aa2.13□□□□□ -2.07
PHD1YKL043W YAL064WP39711 94 aa2.13□□□□□ -2.07
PHD1YKL043W YIL102CP40488 101 aa2.13□□□□□ -2.07
PHD1YKL043W MRX7P53869 86 aa2.13□□□□□ -2.07
PHD1YKL043W DDR2P89113 61 aa2.13□□□□□ -2.07
PHD1YKL043W YBR027CP38220 110 aa2.12□□□□□ -2.07
PHD1YKL043W BSC4P53841 131 aa2.12□□□□□ -2.07
PHD1YKL043W QCR10P37299 77 aa2.11□□□□□ -2.07
PHD1YKL043W YER145C-AA0A023PYF4 145 aa2.1□□□□□ -2.07
PHD1YKL043W YJL197C-AP0C5P0 93 aa2.1□□□□□ -2.07
PHD1YKL043W DDR48P18899 430 aaKnown RBP2.1□□□□□ -2.07
PHD1YKL043W YAR064WP39563 99 aa2.1□□□□□ -2.07
PHD1YKL043W YIL156W-BQ2V2P4 73 aa2.1□□□□□ -2.07
PHD1YKL043W DYN1P36022 4092 aa2.09□□□□□ -2.07
PHD1YKL043W AUA1P32450 94 aa2.09□□□□□ -2.07
PHD1YKL043W YNL122CP53921 115 aaPredicted RBP2.09□□□□□ -2.07
PHD1YKL043W YDR010CQ12426 110 aa2.09□□□□□ -2.07
PHD1YKL043W TAR1Q8TGM6 124 aa2.09□□□□□ -2.07
PHD1YKL043W RPL33AP05744 107 aaKnown RBP2.08□□□□□ -2.08
PHD1YKL043W YCR041WP37265 110 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms