RNA–Protein interactions for RNA: YJL134W

LCB3, Transcript of Long-chain base-1-phosphate phosphatase, yeastyeast

Gene LCB3, Length 1,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB3YJL134W YLR307C-AQ3E825 87 aa4.28□□□□□ -1.72
LCB3YJL134W YAL063C-AQ3E791 96 aa4.27□□□□□ -1.73
LCB3YJL134W YNL042W-BQ3E7Z2 85 aa4.27□□□□□ -1.73
LCB3YJL134W YDR034C-AP0C289 58 aa4.26□□□□□ -1.73
LCB3YJL134W PEX22P39718 180 aa4.26□□□□□ -1.73
LCB3YJL134W SFT1P43682 97 aa4.26□□□□□ -1.73
LCB3YJL134W YPR195CQ06594 109 aa4.26□□□□□ -1.73
LCB3YJL134W YFL041W-AQ3E817 63 aa4.25□□□□□ -1.73
LCB3YJL134W BET1P22804 142 aa4.24□□□□□ -1.73
LCB3YJL134W YFR009W-AP0C5M9 85 aa4.23□□□□□ -1.73
LCB3YJL134W KRE1P17260 313 aa4.23□□□□□ -1.73
LCB3YJL134W YAR1P46683 200 aa4.23□□□□□ -1.73
LCB3YJL134W YGL193CP53097 103 aa4.23□□□□□ -1.73
LCB3YJL134W YHR139C-AO13536 103 aa4.22□□□□□ -1.73
LCB3YJL134W YOR304C-AO14468 76 aa4.22□□□□□ -1.73
LCB3YJL134W RAD6P06104 172 aa4.22□□□□□ -1.73
LCB3YJL134W YER039C-AP0CD97 72 aa4.22□□□□□ -1.73
LCB3YJL134W YLR156WP0CE96 114 aa4.22□□□□□ -1.73
LCB3YJL134W YLR159WP0CE97 114 aa4.22□□□□□ -1.73
LCB3YJL134W YLR161WP0CE98 114 aa4.22□□□□□ -1.73
LCB3YJL134W SPT4P32914 102 aaPredicted RBP4.22□□□□□ -1.73
LCB3YJL134W EMC6Q12431 108 aa4.22□□□□□ -1.73
LCB3YJL134W DDR2P89113 61 aa4.21□□□□□ -1.74
LCB3YJL134W YCR043CP25361 127 aa4.2□□□□□ -1.74
LCB3YJL134W RSM19P53733 91 aaPredicted RBP4.2□□□□□ -1.74
LCB3YJL134W YHL042WP38729 150 aa4.19□□□□□ -1.74
LCB3YJL134W TDA2P40045 126 aa4.19□□□□□ -1.74
LCB3YJL134W GAT4P40569 121 aa4.19□□□□□ -1.74
LCB3YJL134W EDC1P53080 175 aaPredicted RBP4.19□□□□□ -1.74
LCB3YJL134W BSC4P53841 131 aa4.19□□□□□ -1.74
LCB3YJL134W YNL184CP53876 108 aa4.19□□□□□ -1.74
LCB3YJL134W RPL38P49167 78 aaKnown RBP4.18□□□□□ -1.74
LCB3YJL134W RPL36BO14455 100 aaKnown RBP4.17□□□□□ -1.74
LCB3YJL134W YHR007C-AQ07074 71 aa4.17□□□□□ -1.74
LCB3YJL134W YOR072WQ08486 104 aa4.17□□□□□ -1.74
LCB3YJL134W YIR021W-AQ3E739 70 aa4.17□□□□□ -1.74
LCB3YJL134W YLR361C-AQ3E795 98 aa4.17□□□□□ -1.74
LCB3YJL134W YSY6P38374 65 aa4.16□□□□□ -1.74
LCB3YJL134W ICS3P47034 131 aa4.16□□□□□ -1.74
LCB3YJL134W YHR213W-BQ8TGK1 99 aa4.16□□□□□ -1.74
LCB3YJL134W YFL067WP43537 175 aa4.15□□□□□ -1.75
LCB3YJL134W LCL2Q08045 131 aa4.15□□□□□ -1.75
LCB3YJL134W YLR285C-AQ3E771 56 aa4.15□□□□□ -1.75
LCB3YJL134W COX23P38824 151 aa4.14□□□□□ -1.75
LCB3YJL134W EDC2P40023 145 aaPredicted RBP4.14□□□□□ -1.75
LCB3YJL134W YGR039WP53225 103 aa4.14□□□□□ -1.75
LCB3YJL134W GIS2P53849 153 aaKnown RBP RIP-Chip data4.14□□□□□ -1.75not detected
LCB3YJL134W COF1Q03048 143 aaKnown RBP4.14□□□□□ -1.75
LCB3YJL134W RSM18P40033 138 aa4.13□□□□□ -1.75
LCB3YJL134W SHH4Q06236 168 aa4.13□□□□□ -1.75
LCB3YJL134W YJL133C-AQ3E7A3 74 aa4.13□□□□□ -1.75
LCB3YJL134W LCL1Q02786 101 aa4.12□□□□□ -1.75
LCB3YJL134W ATP20Q12233 115 aa4.11□□□□□ -1.75
LCB3YJL134W YDR119W-AQ2V2P9 66 aa4.11□□□□□ -1.75
LCB3YJL134W YGR121W-AQ3E816 71 aa4.11□□□□□ -1.75
LCB3YJL134W TDA8Q6B2U8 126 aa4.11□□□□□ -1.75
LCB3YJL134W MMS2P53152 137 aa4.1□□□□□ -1.75
LCB3YJL134W ECM19Q06011 112 aa4.1□□□□□ -1.75
LCB3YJL134W YHL018WP38744 120 aaPredicted RBP4.09□□□□□ -1.75
LCB3YJL134W SPG1P50088 95 aa4.09□□□□□ -1.75
LCB3YJL134W YOL014WQ08110 124 aa4.09□□□□□ -1.75
LCB3YJL134W YMR230W-AQ3E7B5 62 aa4.08□□□□□ -1.76
LCB3YJL134W YLR162WQ06235 118 aa4.07□□□□□ -1.76
LCB3YJL134W YKL183C-AQ3E765 70 aa4.07□□□□□ -1.76
LCB3YJL134W YPL038W-AQ3E7B4 63 aa4.07□□□□□ -1.76
LCB3YJL134W RPS28BP0C0X0 67 aaKnown RBP4.06□□□□□ -1.76
LCB3YJL134W YJR085CP47131 105 aaKnown RBP4.06□□□□□ -1.76
LCB3YJL134W RPS28AQ3E7X9 67 aaPredicted RBP4.06□□□□□ -1.76
LCB3YJL134W YBL112CQ3E7Y4 105 aa4.06□□□□□ -1.76
LCB3YJL134W MIC10Q96VH5 97 aa4.06□□□□□ -1.76
LCB3YJL134W YCR050CP25630 102 aa4.04□□□□□ -1.76
LCB3YJL134W YEL045CP32616 141 aa4.04□□□□□ -1.76
LCB3YJL134W HHF1P02309 103 aaKnown RBP4.03□□□□□ -1.76
LCB3YJL134W YBR121C-AP0C5L4 52 aa4.03□□□□□ -1.76
LCB3YJL134W YJL197C-AP0C5P0 93 aa4.03□□□□□ -1.76
LCB3YJL134W YBR027CP38220 110 aa4.03□□□□□ -1.76
LCB3YJL134W YER078W-AQ3E7A2 54 aa4.03□□□□□ -1.76
LCB3YJL134W YOR268CQ08734 132 aa4.02□□□□□ -1.77
LCB3YJL134W YOR314WQ12506 109 aa4.02□□□□□ -1.77
LCB3YJL134W YLR157W-DP0CE99 70 aa4.01□□□□□ -1.77
LCB3YJL134W TOM6P33448 61 aa4□□□□□ -1.77
LCB3YJL134W YGL149WP53116 101 aa3.99□□□□□ -1.77
LCB3YJL134W DDR48P18899 430 aaKnown RBP3.98□□□□□ -1.77
LCB3YJL134W YOL097W-AQ3E7Y9 61 aa3.98□□□□□ -1.77
LCB3YJL134W AIM4P38305 123 aaPredicted RBP3.97□□□□□ -1.77
LCB3YJL134W YAR064WP39563 99 aa3.97□□□□□ -1.77
LCB3YJL134W YIL102CP40488 101 aa3.97□□□□□ -1.77
LCB3YJL134W YER187WP40102 141 aa3.96□□□□□ -1.78
LCB3YJL134W YDR246W-AQ3E763 66 aa3.96□□□□□ -1.78
LCB3YJL134W NOP10Q6Q547 58 aaPredicted RBP3.96□□□□□ -1.78
LCB3YJL134W RPL36AP05745 100 aaPredicted RBP3.93□□□□□ -1.78
LCB3YJL134W LIP1Q03579 150 aa3.92□□□□□ -1.78
LCB3YJL134W YDR182W-AQ3E796 67 aa3.9□□□□□ -1.79
LCB3YJL134W SBH1P52870 82 aa3.89□□□□□ -1.79
LCB3YJL134W YPR153WQ06537 140 aa3.89□□□□□ -1.79
LCB3YJL134W YDL012CQ12489 107 aa3.89□□□□□ -1.79
LCB3YJL134W KSH1Q8TGJ3 72 aa3.89□□□□□ -1.79
LCB3YJL134W YOL013W-AP0C272 63 aaPredicted RBP3.88□□□□□ -1.79
LCB3YJL134W KTI11Q3E840 82 aa3.88□□□□□ -1.79
LCB3YJL134W YOL166W-AQ8TGJ1 51 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms