RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W RPL26AP05743 127 aaKnown RBP5.26□□□□□ -1.57
PEX28YHR150W UBC4P15731 148 aa5.26□□□□□ -1.57
PEX28YHR150W RPL26BP53221 127 aaKnown RBP5.26□□□□□ -1.57
PEX28YHR150W IGD1P43598 195 aa5.25□□□□□ -1.57
PEX28YHR150W YLL066W-BQ8TGJ7 56 aa5.25□□□□□ -1.57
PEX28YHR150W DYN1P36022 4092 aa5.25□□□□□ -1.57
PEX28YHR150W RTC6O14464 93 aa5.24□□□□□ -1.57
PEX28YHR150W YLR156WP0CE96 114 aa5.24□□□□□ -1.57
PEX28YHR150W YLR159WP0CE97 114 aa5.24□□□□□ -1.57
PEX28YHR150W YLR161WP0CE98 114 aa5.24□□□□□ -1.57
PEX28YHR150W YIR021W-AQ3E739 70 aa5.24□□□□□ -1.57
PEX28YHR150W FYV5P25585 152 aa5.23□□□□□ -1.57
PEX28YHR150W RSM19P53733 91 aaPredicted RBP5.23□□□□□ -1.57
PEX28YHR150W YBR230W-AQ3E762 66 aa5.23□□□□□ -1.57
PEX28YHR150W RPL11AP0C0W9 174 aaKnown RBP5.22□□□□□ -1.57
PEX28YHR150W RPL11BQ3E757 174 aaPredicted RBP5.22□□□□□ -1.57
PEX28YHR150W YJL127C-BQ3E828 52 aa5.22□□□□□ -1.57
PEX28YHR150W TOM6P33448 61 aa5.21□□□□□ -1.58
PEX28YHR150W TDA2P40045 126 aa5.21□□□□□ -1.58
PEX28YHR150W YAR023CD6VPM8 179 aa5.2□□□□□ -1.58
PEX28YHR150W ECM12O13529 151 aa5.2□□□□□ -1.58
PEX28YHR150W RSM18P40033 138 aa5.2□□□□□ -1.58
PEX28YHR150W SNA2P56508 79 aa5.2□□□□□ -1.58
PEX28YHR150W Q0032Q9ZZX7 96 aa5.2□□□□□ -1.58
PEX28YHR150W YLR415CO13578 112 aa5.19□□□□□ -1.58
PEX28YHR150W ICS3P47034 131 aa5.19□□□□□ -1.58
PEX28YHR150W BET1P22804 142 aa5.18□□□□□ -1.58
PEX28YHR150W YLR307C-AQ3E825 87 aa5.18□□□□□ -1.58
PEX28YHR150W YER187WP40102 141 aa5.17□□□□□ -1.58
PEX28YHR150W SFT1P43682 97 aa5.17□□□□□ -1.58
PEX28YHR150W YNL042W-BQ3E7Z2 85 aa5.16□□□□□ -1.58
PEX28YHR150W ATP20Q12233 115 aa5.15□□□□□ -1.58
PEX28YHR150W YDR246W-AQ3E763 66 aa5.15□□□□□ -1.58
PEX28YHR150W YOL014WQ08110 124 aa5.14□□□□□ -1.59
PEX28YHR150W YKL183C-AQ3E765 70 aa5.14□□□□□ -1.59
PEX28YHR150W YHR213W-BQ8TGK1 99 aa5.14□□□□□ -1.59
PEX28YHR150W EDC2P40023 145 aaPredicted RBP5.13□□□□□ -1.59
PEX28YHR150W COX23P38824 151 aa5.12□□□□□ -1.59
PEX28YHR150W AIM4P38305 123 aaPredicted RBP5.11□□□□□ -1.59
PEX28YHR150W YLR361C-AQ3E795 98 aa5.11□□□□□ -1.59
PEX28YHR150W YJL133C-AQ3E7A3 74 aa5.11□□□□□ -1.59
PEX28YHR150W YCR050CP25630 102 aa5.1□□□□□ -1.59
PEX28YHR150W YGL041C-BQ3E750 60 aa5.1□□□□□ -1.59
PEX28YHR150W PEX22P39718 180 aa5.09□□□□□ -1.59
PEX28YHR150W BSC4P53841 131 aa5.09□□□□□ -1.59
PEX28YHR150W YHR007C-AQ07074 71 aa5.09□□□□□ -1.59
PEX28YHR150W YOR314WQ12506 109 aa5.09□□□□□ -1.59
PEX28YHR150W NOP10Q6Q547 58 aaPredicted RBP5.09□□□□□ -1.59
PEX28YHR150W RPL36BO14455 100 aaKnown RBP5.09□□□□□ -1.6
PEX28YHR150W SPT4P32914 102 aaPredicted RBP5.09□□□□□ -1.6
PEX28YHR150W YPR195CQ06594 109 aa5.09□□□□□ -1.6
PEX28YHR150W DDR2P89113 61 aa5.08□□□□□ -1.6
PEX28YHR150W YGL193CP53097 103 aa5.07□□□□□ -1.6
PEX28YHR150W GIS2P53849 153 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
PEX28YHR150W MRP10O75012 95 aa5.06□□□□□ -1.6
PEX28YHR150W YDR034C-AP0C289 58 aa5.06□□□□□ -1.6
PEX28YHR150W YER039C-AP0CD97 72 aa5.06□□□□□ -1.6
PEX28YHR150W ECM19Q06011 112 aa5.05□□□□□ -1.6
PEX28YHR150W YOR072WQ08486 104 aa5.05□□□□□ -1.6
PEX28YHR150W TDA8Q6B2U8 126 aa5.05□□□□□ -1.6
PEX28YHR150W YEL045CP32616 141 aa5.02□□□□□ -1.61
PEX28YHR150W MIC10Q96VH5 97 aa5.01□□□□□ -1.61
PEX28YHR150W YLR162WQ06235 118 aa5□□□□□ -1.61
PEX28YHR150W YOL166W-AQ8TGJ1 51 aa5□□□□□ -1.61
PEX28YHR150W YIL102CP40488 101 aa4.99□□□□□ -1.61
PEX28YHR150W YMR230W-AQ3E7B5 62 aa4.99□□□□□ -1.61
PEX28YHR150W RPL36AP05745 100 aaPredicted RBP4.98□□□□□ -1.61
PEX28YHR150W YDR182W-AQ3E796 67 aa4.98□□□□□ -1.61
PEX28YHR150W LIP1Q03579 150 aa4.97□□□□□ -1.61
PEX28YHR150W HOT13P36078 116 aa4.95□□□□□ -1.62
PEX28YHR150W SBH1P52870 82 aa4.95□□□□□ -1.62
PEX28YHR150W YHL005CP38752 130 aa4.94□□□□□ -1.62
PEX28YHR150W YBR182C-AQ8TGU6 64 aa4.94□□□□□ -1.62
PEX28YHR150W YJL197C-AP0C5P0 93 aa4.93□□□□□ -1.62
PEX28YHR150W LCL2Q08045 131 aa4.93□□□□□ -1.62
PEX28YHR150W RPS30AP0CX33 63 aaKnown RBP4.92□□□□□ -1.62
PEX28YHR150W RPS30BP0CX34 63 aaKnown RBP4.92□□□□□ -1.62
PEX28YHR150W YOL013W-AP0C272 63 aaPredicted RBP4.92□□□□□ -1.62
PEX28YHR150W YAR064WP39563 99 aa4.92□□□□□ -1.62
PEX28YHR150W YGR121W-AQ3E816 71 aa4.91□□□□□ -1.62
PEX28YHR150W YCR043CP25361 127 aa4.89□□□□□ -1.63
PEX28YHR150W YBR027CP38220 110 aa4.89□□□□□ -1.63
PEX28YHR150W KSH1Q8TGJ3 72 aa4.88□□□□□ -1.63
PEX28YHR150W LCL1Q02786 101 aa4.87□□□□□ -1.63
PEX28YHR150W SPG1P50088 95 aa4.85□□□□□ -1.63
PEX28YHR150W MMS2P53152 137 aa4.84□□□□□ -1.63
PEX28YHR150W KTI11Q3E840 82 aa4.84□□□□□ -1.63
PEX28YHR150W YOR268CQ08734 132 aa4.83□□□□□ -1.64
PEX28YHR150W YOR381W-AQ3E804 55 aa4.83□□□□□ -1.64
PEX28YHR150W YLR157W-DP0CE99 70 aa4.82□□□□□ -1.64
PEX28YHR150W YJR085CP47131 105 aaKnown RBP4.82□□□□□ -1.64
PEX28YHR150W YPR153WQ06537 140 aa4.81□□□□□ -1.64
PEX28YHR150W YOL097W-AQ3E7Y9 61 aa4.8□□□□□ -1.64
PEX28YHR150W YDL012CQ12489 107 aa4.8□□□□□ -1.64
PEX28YHR150W YHR125WP38831 101 aa4.79□□□□□ -1.64
PEX28YHR150W YDR010CQ12426 110 aa4.78□□□□□ -1.64
PEX28YHR150W YBR121C-AP0C5L4 52 aa4.77□□□□□ -1.65
PEX28YHR150W YGL149WP53116 101 aa4.77□□□□□ -1.65
PEX28YHR150W YGR164WP53291 111 aa4.77□□□□□ -1.65
PEX28YHR150W YMR122CQ03879 124 aa4.77□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms