RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C RPS30AP0CX33 63 aaKnown RBP4.14□□□□□ -1.75
SFB3YHR098C RPS30BP0CX34 63 aaKnown RBP4.14□□□□□ -1.75
SFB3YHR098C RPB9P27999 122 aa4.14□□□□□ -1.75
SFB3YHR098C CRC1Q12289 327 aa4.14□□□□□ -1.75
SFB3YHR098C YNL146C-AQ3E7Z1 64 aa4.14□□□□□ -1.75
SFB3YHR098C HFA1P32874 2273 aa4.13□□□□□ -1.75
SFB3YHR098C YMR122CQ03879 124 aa4.13□□□□□ -1.75
SFB3YHR098C YOL014WQ08110 124 aa4.12□□□□□ -1.75
SFB3YHR098C PMP3P87284 55 aa4.1□□□□□ -1.75
SFB3YHR098C YMR122W-AQ3E842 84 aa4.1□□□□□ -1.75
SFB3YHR098C YER188C-AP0C0V2 99 aa4.1□□□□□ -1.75
SFB3YHR098C TSC3Q3E790 80 aa4.1□□□□□ -1.75
SFB3YHR098C YMR244WQ04018 355 aa4.09□□□□□ -1.75
SFB3YHR098C OST5Q92316 86 aa4.09□□□□□ -1.75
SFB3YHR098C YEL045CP32616 141 aa4.08□□□□□ -1.76
SFB3YHR098C YPR153WQ06537 140 aa4.08□□□□□ -1.76
SFB3YHR098C YKL065W-AQ2V2P2 73 aa4.08□□□□□ -1.76
SFB3YHR098C YIL102CP40488 101 aa4.08□□□□□ -1.76
SFB3YHR098C MRPS8Q03799 155 aa4.07□□□□□ -1.76
SFB3YHR098C IRA1P18963 3092 aa4.07□□□□□ -1.76
SFB3YHR098C TRA1P38811 3744 aa4.07□□□□□ -1.76
SFB3YHR098C HOT13P36078 116 aa4.07□□□□□ -1.76
SFB3YHR098C TAO3P40468 2376 aa4.06□□□□□ -1.76
SFB3YHR098C YPR010C-AA5Z2X5 72 aa4.05□□□□□ -1.76
SFB3YHR098C RPS11AP0CX47 156 aaKnown RBP4.05□□□□□ -1.76
SFB3YHR098C RPS11BP0CX48 156 aaKnown RBP4.05□□□□□ -1.76
SFB3YHR098C LIP1Q03579 150 aa4.05□□□□□ -1.76
SFB3YHR098C COX23P38824 151 aa4.04□□□□□ -1.76
SFB3YHR098C YML100W-AQ8TGT0 57 aa4.04□□□□□ -1.76
SFB3YHR098C YJR085CP47131 105 aaKnown RBP4.03□□□□□ -1.76
SFB3YHR098C RPL29P05747 59 aaPredicted RBP4.03□□□□□ -1.76
SFB3YHR098C YDR010CQ12426 110 aa4.02□□□□□ -1.77
SFB3YHR098C YHR213W-BQ8TGK1 99 aa4.02□□□□□ -1.77
SFB3YHR098C YNL162W-AQ3E7A8 72 aa4.02□□□□□ -1.77
SFB3YHR098C TAR1Q8TGM6 124 aa4.02□□□□□ -1.77
SFB3YHR098C MVB12P42939 101 aa4.02□□□□□ -1.77
SFB3YHR098C EDC2P40023 145 aaPredicted RBP4.01□□□□□ -1.77
SFB3YHR098C SPC1P46965 94 aa4□□□□□ -1.77
SFB3YHR098C YJL133C-AQ3E7A3 74 aa3.99□□□□□ -1.77
SFB3YHR098C FYV5P25585 152 aa3.98□□□□□ -1.77
SFB3YHR098C YAL064WP39711 94 aa3.98□□□□□ -1.77
SFB3YHR098C HOR7Q05827 59 aa3.98□□□□□ -1.77
SFB3YHR098C YBR230W-AQ3E762 66 aa3.98□□□□□ -1.77
SFB3YHR098C YIL156W-BQ2V2P4 73 aa3.97□□□□□ -1.77
SFB3YHR098C YDR034W-BQ6Q5X2 51 aa3.97□□□□□ -1.77
SFB3YHR098C YAR023CD6VPM8 179 aa3.97□□□□□ -1.77
SFB3YHR098C YFR032C-BQ8TGU2 87 aa3.97□□□□□ -1.77
SFB3YHR098C YJL127C-BQ3E828 52 aa3.97□□□□□ -1.77
SFB3YHR098C URA2P07259 2214 aaKnown RBP3.96□□□□□ -1.78
SFB3YHR098C YOL013W-AP0C272 63 aaPredicted RBP3.96□□□□□ -1.78
SFB3YHR098C YCR095W-AQ3E787 52 aa3.96□□□□□ -1.78
SFB3YHR098C IGD1P43598 195 aa3.95□□□□□ -1.78
SFB3YHR098C AQY2P0CD90 149 aa3.94□□□□□ -1.78
SFB3YHR098C YDL241WQ07738 123 aa3.94□□□□□ -1.78
SFB3YHR098C YLR157W-DP0CE99 70 aa3.94□□□□□ -1.78
SFB3YHR098C TMC1Q08422 150 aaPredicted RBP3.94□□□□□ -1.78
SFB3YHR098C YGL193CP53097 103 aa3.93□□□□□ -1.78
SFB3YHR098C ECM19Q06011 112 aa3.93□□□□□ -1.78
SFB3YHR098C FMP27Q06179 2628 aa3.93□□□□□ -1.78
SFB3YHR098C YBL039W-BP0C268 59 aa3.93□□□□□ -1.78
SFB3YHR098C HUB1Q6Q546 73 aa3.92□□□□□ -1.78
SFB3YHR098C YNL042W-BQ3E7Z2 85 aa3.92□□□□□ -1.78
SFB3YHR098C SDH6Q3E785 79 aa3.91□□□□□ -1.78
SFB3YHR098C YMR001C-AQ8TGS9 76 aa3.91□□□□□ -1.78
SFB3YHR098C YPL278CQ08990 100 aa3.91□□□□□ -1.78
SFB3YHR098C RPC10P40422 70 aa3.91□□□□□ -1.78
SFB3YHR098C YCR001WP25347 104 aa3.9□□□□□ -1.78
SFB3YHR098C YHR125WP38831 101 aa3.9□□□□□ -1.78
SFB3YHR098C YER078W-AQ3E7A2 54 aa3.9□□□□□ -1.78
SFB3YHR098C DDR48P18899 430 aaKnown RBP3.9□□□□□ -1.79
SFB3YHR098C YLR307C-AQ3E825 87 aa3.9□□□□□ -1.79
SFB3YHR098C GCN1P33892 2672 aaKnown RBP3.88□□□□□ -1.79
SFB3YHR098C YGR240C-AQ3E786 66 aa3.88□□□□□ -1.79
SFB3YHR098C AUA1P32450 94 aa3.87□□□□□ -1.79
SFB3YHR098C SPG1P50088 95 aa3.87□□□□□ -1.79
SFB3YHR098C YGL260WP53056 76 aa3.87□□□□□ -1.79
SFB3YHR098C RDS3Q06835 107 aaPredicted RBP3.87□□□□□ -1.79
SFB3YHR098C YBL008W-AQ3E821 79 aa3.87□□□□□ -1.79
SFB3YHR098C YAR064WP39563 99 aa3.86□□□□□ -1.79
SFB3YHR098C YHR007C-AQ07074 71 aa3.85□□□□□ -1.79
SFB3YHR098C YBR027CP38220 110 aa3.85□□□□□ -1.79
SFB3YHR098C FYV12Q08559 129 aa3.85□□□□□ -1.79
SFB3YHR098C BSC4P53841 131 aa3.84□□□□□ -1.8
SFB3YHR098C LCL2Q08045 131 aa3.84□□□□□ -1.8
SFB3YHR098C ATP17Q06405 101 aa3.82□□□□□ -1.8
SFB3YHR098C Q0032Q9ZZX7 96 aa3.82□□□□□ -1.8
SFB3YHR098C YGL149WP53116 101 aa3.82□□□□□ -1.8
SFB3YHR098C YNL122CP53921 115 aaPredicted RBP3.82□□□□□ -1.8
SFB3YHR098C RPL33AP05744 107 aaKnown RBP3.81□□□□□ -1.8
SFB3YHR098C RPL33BP41056 107 aaKnown RBP3.81□□□□□ -1.8
SFB3YHR098C YOR072WQ08486 104 aa3.81□□□□□ -1.8
SFB3YHR098C MRX7P53869 86 aa3.81□□□□□ -1.8
SFB3YHR098C DDR2P89113 61 aa3.81□□□□□ -1.8
SFB3YHR098C YDR115WQ04598 105 aa3.8□□□□□ -1.8
SFB3YHR098C YPR117WQ06116 2489 aa3.8□□□□□ -1.8
SFB3YHR098C YHR212W-AP0CX91 67 aa3.8□□□□□ -1.8
SFB3YHR098C GIS2P53849 153 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
SFB3YHR098C QCR10P37299 77 aa3.79□□□□□ -1.8
SFB3YHR098C YCR043CP25361 127 aa3.78□□□□□ -1.8
SFB3YHR098C YMR230W-AQ3E7B5 62 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms