RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W YBR219CP38317 127 aa3.39□□□□□ -1.87
PDE1YGL248W SMX2P40204 77 aaKnown RBP3.39□□□□□ -1.87
PDE1YGL248W YIL156W-BQ2V2P4 73 aa3.39□□□□□ -1.87
PDE1YGL248W YEL008WP40001 126 aa3.38□□□□□ -1.87
PDE1YGL248W PAU20Q08322 120 aa3.38□□□□□ -1.87
PDE1YGL248W MRPS12P53732 153 aa3.37□□□□□ -1.87
PDE1YGL248W TY4B-HP0C2J7 1802 aa3.37□□□□□ -1.87
PDE1YGL248W CYR1P08678 2026 aaKnown RBP3.36□□□□□ -1.87
PDE1YGL248W RIM15P43565 1770 aa3.35□□□□□ -1.87
PDE1YGL248W TY4B-JP47024 1803 aa3.35□□□□□ -1.87
PDE1YGL248W YGR240C-AQ3E786 66 aa3.35□□□□□ -1.87
PDE1YGL248W YDR182W-AQ3E796 67 aa3.34□□□□□ -1.87
PDE1YGL248W STT4P37297 1900 aa3.31□□□□□ -1.88
PDE1YGL248W MOT1P32333 1867 aa3.31□□□□□ -1.88
PDE1YGL248W YPR096CO13587 100 aa3.31□□□□□ -1.88
PDE1YGL248W BPH1P25356 2167 aa3.31□□□□□ -1.88
PDE1YGL248W BRR2P32639 2163 aaKnown RBP3.3□□□□□ -1.88
PDE1YGL248W YJL009WP47078 108 aa3.3□□□□□ -1.88
PDE1YGL248W YNL146C-AQ3E7Z1 64 aa3.3□□□□□ -1.88
PDE1YGL248W YDL022C-AP0C5L6 82 aa3.29□□□□□ -1.88
PDE1YGL248W YCL042WP25572 119 aa3.29□□□□□ -1.88
PDE1YGL248W YNL042W-BQ3E7Z2 85 aa3.29□□□□□ -1.88
PDE1YGL248W ACC1Q00955 2233 aaKnown RBP3.29□□□□□ -1.88
PDE1YGL248W YLR255CO13574 117 aa3.27□□□□□ -1.89
PDE1YGL248W YKL018C-AQ3E7A7 99 aa3.27□□□□□ -1.89
PDE1YGL248W YCR001WP25347 104 aa3.26□□□□□ -1.89
PDE1YGL248W ATP17Q06405 101 aa3.26□□□□□ -1.89
PDE1YGL248W YOR032W-AQ8TGS1 66 aa3.26□□□□□ -1.89
PDE1YGL248W AQY2P0CD90 149 aa3.25□□□□□ -1.89
PDE1YGL248W HUB1Q6Q546 73 aa3.25□□□□□ -1.89
PDE1YGL248W YMR007WQ03675 126 aa3.24□□□□□ -1.89
PDE1YGL248W YMR122W-AQ3E842 84 aa3.24□□□□□ -1.89
PDE1YGL248W SLH1P53327 1967 aaKnown RBP3.23□□□□□ -1.89
PDE1YGL248W RPS30AP0CX33 63 aaKnown RBP3.23□□□□□ -1.89
PDE1YGL248W RPS30BP0CX34 63 aaKnown RBP3.23□□□□□ -1.89
PDE1YGL248W YIL086CP40503 102 aa3.22□□□□□ -1.89
PDE1YGL248W YNL122CP53921 115 aaPredicted RBP3.22□□□□□ -1.89
PDE1YGL248W SGF11Q03067 99 aa3.22□□□□□ -1.89
PDE1YGL248W MGR2Q02889 113 aa3.2□□□□□ -1.9
PDE1YGL248W YBR201C-AQ2V2Q3 67 aa3.2□□□□□ -1.9
PDE1YGL248W YOL097W-AQ3E7Y9 61 aa3.2□□□□□ -1.9
PDE1YGL248W SHU1P38751 150 aa3.19□□□□□ -1.9
PDE1YGL248W YNL190WP53872 204 aa3.19□□□□□ -1.9
PDE1YGL248W YOR034C-AQ3E735 80 aa3.19□□□□□ -1.9
PDE1YGL248W EDC1P53080 175 aaPredicted RBP3.18□□□□□ -1.9
PDE1YGL248W YOL166W-AQ8TGJ1 51 aa3.18□□□□□ -1.9
PDE1YGL248W ATP18P81450 59 aa3.17□□□□□ -1.9
PDE1YGL248W LCL1Q02786 101 aa3.17□□□□□ -1.9
PDE1YGL248W FIG2P25653 1609 aa3.17□□□□□ -1.9
PDE1YGL248W YOR072WQ08486 104 aa3.16□□□□□ -1.9
PDE1YGL248W YBR032WP38223 100 aa3.15□□□□□ -1.91
PDE1YGL248W YHR086W-AQ3E746 53 aa3.15□□□□□ -1.91
PDE1YGL248W Q0032Q9ZZX7 96 aa3.15□□□□□ -1.91
PDE1YGL248W YOR192C-CQ3E736 78 aa3.14□□□□□ -1.91
PDE1YGL248W SDH6Q3E785 79 aa3.14□□□□□ -1.91
PDE1YGL248W YMR141CP40211 102 aa3.13□□□□□ -1.91
PDE1YGL248W MVB12P42939 101 aa3.12□□□□□ -1.91
PDE1YGL248W FLO1P32768 1537 aa3.11□□□□□ -1.91
PDE1YGL248W COX7P10174 60 aa3.09□□□□□ -1.91
PDE1YGL248W YJR107C-AP0CT86 78 aa3.08□□□□□ -1.92
PDE1YGL248W HUG1Q6Q5K6 68 aa3.08□□□□□ -1.92
PDE1YGL248W HKR1P41809 1802 aa3.07□□□□□ -1.92
PDE1YGL248W YAR064WP39563 99 aa3.07□□□□□ -1.92
PDE1YGL248W BLM10P43583 2143 aa3.05□□□□□ -1.92
PDE1YGL248W YHR212W-AP0CX91 67 aa3.05□□□□□ -1.92
PDE1YGL248W YJR128WP47162 119 aa3.05□□□□□ -1.92
PDE1YGL248W YLR146W-AQ2V2P1 62 aa3.05□□□□□ -1.92
PDE1YGL248W YMR001C-AQ8TGS9 76 aa3.04□□□□□ -1.92
PDE1YGL248W YDL012CQ12489 107 aa3.03□□□□□ -1.92
PDE1YGL248W YPR108W-AQ3E7B3 70 aa3.03□□□□□ -1.92
PDE1YGL248W YOL013W-AP0C272 63 aaPredicted RBP3.01□□□□□ -1.93
PDE1YGL248W YBL039W-BP0C268 59 aa3□□□□□ -1.93
PDE1YGL248W YLR157W-DP0CE99 70 aa3□□□□□ -1.93
PDE1YGL248W RPL38P49167 78 aaKnown RBP2.99□□□□□ -1.93
PDE1YGL248W BEM2P39960 2167 aaKnown RBP2.99□□□□□ -1.93
PDE1YGL248W YOR011W-AQ3E807 68 aa2.98□□□□□ -1.93
PDE1YGL248W SEC16P48415 2195 aaKnown RBP2.97□□□□□ -1.93
PDE1YGL248W YIL102CP40488 101 aa2.96□□□□□ -1.94
PDE1YGL248W YBR200W-AQ3E755 54 aa2.96□□□□□ -1.94
PDE1YGL248W POL2P21951 2222 aaKnown RBP2.96□□□□□ -1.94
PDE1YGL248W HFA1P32874 2273 aa2.95□□□□□ -1.94
PDE1YGL248W HHY1P39982 102 aa2.95□□□□□ -1.94
PDE1YGL248W YBR072C-AQ3E794 53 aa2.92□□□□□ -1.94
PDE1YGL248W FAB1P34756 2278 aa2.91□□□□□ -1.94
PDE1YGL248W RPC10P40422 70 aa2.91□□□□□ -1.94
PDE1YGL248W YGR025WP53216 100 aa2.88□□□□□ -1.95
PDE1YGL248W YOR394C-AQ8TGJ0 55 aa2.86□□□□□ -1.95
PDE1YGL248W YHR213W-BQ8TGK1 99 aa2.83□□□□□ -1.96
PDE1YGL248W YPR010C-AA5Z2X5 72 aa2.82□□□□□ -1.96
PDE1YGL248W OLI1P61829 76 aa2.82□□□□□ -1.96
PDE1YGL248W TOS6P48560 102 aa2.81□□□□□ -1.96
PDE1YGL248W YBR230W-AQ3E762 66 aa2.81□□□□□ -1.96
PDE1YGL248W COX9P07255 59 aa2.8□□□□□ -1.96
PDE1YGL248W RPS27AP35997 82 aaKnown RBP2.75□□□□□ -1.97
PDE1YGL248W URA2P07259 2214 aaKnown RBP2.73□□□□□ -1.97
PDE1YGL248W AUA1P32450 94 aa2.73□□□□□ -1.97
PDE1YGL248W YFR009W-AP0C5M9 85 aa2.7□□□□□ -1.98
PDE1YGL248W COA2Q3E823 68 aa2.7□□□□□ -1.98
PDE1YGL248W HUA1P40325 198 aa2.68□□□□□ -1.98
PDE1YGL248W YDR524C-BQ3E6R4 66 aa2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms