RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C SCP1Q08873 200 aa0.22□□□□□ -2.37
PRE4YFR050C YLR157W-EP0CF00 54 aa0.21□□□□□ -2.38
PRE4YFR050C POP7P38291 140 aa0.21□□□□□ -2.38
PRE4YFR050C PHS1P40857 217 aa0.21□□□□□ -2.38
PRE4YFR050C ARL3Q02804 198 aa0.21□□□□□ -2.38
PRE4YFR050C HPA2Q06592 156 aa0.21□□□□□ -2.38
PRE4YFR050C FCF2Q12035 217 aaPredicted RBP0.21□□□□□ -2.38
PRE4YFR050C SLO1Q3E784 85 aa0.21□□□□□ -2.38
PRE4YFR050C YLR342W-AQ3E810 57 aa0.21□□□□□ -2.38
PRE4YFR050C QCR10P37299 77 aa0.2□□□□□ -2.38
PRE4YFR050C ATX1P38636 73 aa0.2□□□□□ -2.38
PRE4YFR050C YIL014C-AQ02598 104 aa0.2□□□□□ -2.38
PRE4YFR050C YOR385WQ08909 290 aa0.2□□□□□ -2.38
PRE4YFR050C YNL277W-AQ3E7Z0 62 aa0.2□□□□□ -2.38
PRE4YFR050C YEA6P39953 335 aa0.19□□□□□ -2.38
PRE4YFR050C ERV14P53173 138 aa0.19□□□□□ -2.38
PRE4YFR050C SPC2Q04969 178 aa0.19□□□□□ -2.38
PRE4YFR050C CNL1Q06333 122 aa0.19□□□□□ -2.38
PRE4YFR050C YBR072C-AQ3E794 53 aa0.19□□□□□ -2.38
PRE4YFR050C YBL039W-BP0C268 59 aa0.18□□□□□ -2.38
PRE4YFR050C MRP17P28778 131 aa0.18□□□□□ -2.38
PRE4YFR050C PAU16P35994 123 aa0.18□□□□□ -2.38
PRE4YFR050C SWM2P40342 146 aa0.18□□□□□ -2.38
PRE4YFR050C GPI19Q04082 140 aa0.18□□□□□ -2.38
PRE4YFR050C YCR050CP25630 102 aa0.17□□□□□ -2.38
PRE4YFR050C COA2Q3E823 68 aa0.17□□□□□ -2.38
PRE4YFR050C BSC4P53841 131 aa0.16□□□□□ -2.38
PRE4YFR050C SAE3P89114 91 aa0.16□□□□□ -2.38
PRE4YFR050C YKL023C-AQ2V2P3 75 aa0.16□□□□□ -2.38
PRE4YFR050C YLR363W-AQ3E747 85 aa0.16□□□□□ -2.38
PRE4YFR050C YKL044WP36092 106 aa0.15□□□□□ -2.39
PRE4YFR050C GTT1P40582 234 aa0.15□□□□□ -2.39
PRE4YFR050C AIM11P87275 137 aa0.15□□□□□ -2.39
PRE4YFR050C TVP18Q04767 167 aa0.15□□□□□ -2.39
PRE4YFR050C AIM4P38305 123 aaPredicted RBP0.14□□□□□ -2.39
PRE4YFR050C VMA7P39111 118 aa0.14□□□□□ -2.39
PRE4YFR050C TDA2P40045 126 aa0.14□□□□□ -2.39
PRE4YFR050C VMA21P41806 77 aa0.14□□□□□ -2.39
PRE4YFR050C SPC24Q04477 213 aa0.14□□□□□ -2.39
PRE4YFR050C YPL261CQ08976 102 aa0.14□□□□□ -2.39
PRE4YFR050C DAD1Q12248 94 aa0.14□□□□□ -2.39
PRE4YFR050C COX19Q3E731 98 aa0.14□□□□□ -2.39
PRE4YFR050C OST5Q92316 86 aa0.14□□□□□ -2.39
PRE4YFR050C ACP1P32463 125 aa0.13□□□□□ -2.39
PRE4YFR050C SRB6P32570 121 aa0.13□□□□□ -2.39
PRE4YFR050C SHU1P38751 150 aa0.13□□□□□ -2.39
PRE4YFR050C CYB5P40312 120 aa0.13□□□□□ -2.39
PRE4YFR050C SFT1P43682 97 aa0.13□□□□□ -2.39
PRE4YFR050C SNN1P48232 102 aa0.13□□□□□ -2.39
PRE4YFR050C YGR164WP53291 111 aa0.13□□□□□ -2.39
PRE4YFR050C RPB11P38902 120 aa0.12□□□□□ -2.39
PRE4YFR050C APS2Q00381 147 aa0.12□□□□□ -2.39
PRE4YFR050C RUB1Q03919 77 aa0.12□□□□□ -2.39
PRE4YFR050C YER187WP40102 141 aa0.11□□□□□ -2.39
PRE4YFR050C YLR361C-AQ3E795 98 aa0.11□□□□□ -2.39
PRE4YFR050C YOL164W-AQ3E7A5 60 aa0.11□□□□□ -2.39
PRE4YFR050C YBR292CP38357 123 aa0.1□□□□□ -2.39
PRE4YFR050C COX23P38824 151 aa0.1□□□□□ -2.39
PRE4YFR050C YAR029WP39549 74 aa0.1□□□□□ -2.39
PRE4YFR050C MRPS12P53732 153 aa0.1□□□□□ -2.39
PRE4YFR050C YMR090WQ04304 227 aaKnown RBP0.1□□□□□ -2.39
PRE4YFR050C YLR285C-AQ3E771 56 aa0.1□□□□□ -2.39
PRE4YFR050C GCV3P39726 170 aaPredicted RBP0.09□□□□□ -2.4
PRE4YFR050C HUR1P45820 110 aa0.09□□□□□ -2.4
PRE4YFR050C YNL190WP53872 204 aa0.09□□□□□ -2.4
PRE4YFR050C LSM6Q06406 86 aaKnown RBP0.09□□□□□ -2.4
PRE4YFR050C YML054C-AQ3E809 52 aa0.09□□□□□ -2.4
PRE4YFR050C HMRA2P0CY13 119 aa0.08□□□□□ -2.4
PRE4YFR050C YHR130CP38834 111 aa0.08□□□□□ -2.4
PRE4YFR050C YIR021W-AQ3E739 70 aa0.08□□□□□ -2.4
PRE4YFR050C YPL038W-AQ3E7B4 63 aa0.08□□□□□ -2.4
PRE4YFR050C YLR255CO13574 117 aa0.07□□□□□ -2.4
PRE4YFR050C YNL198CP40166 100 aa0.07□□□□□ -2.4
PRE4YFR050C MRX7P53869 86 aa0.06□□□□□ -2.4
PRE4YFR050C YOR376W-AQ3E805 51 aa0.06□□□□□ -2.4
PRE4YFR050C RPA12P32529 125 aaKnown RBP0.05□□□□□ -2.4
PRE4YFR050C RPL38P49167 78 aaKnown RBP0.05□□□□□ -2.4
PRE4YFR050C ICY1Q04329 127 aa0.05□□□□□ -2.4
PRE4YFR050C PAU20Q08322 120 aa0.05□□□□□ -2.4
PRE4YFR050C WIP1Q2V2P8 89 aa0.05□□□□□ -2.4
PRE4YFR050C NHP2P32495 156 aaPredicted RBP0.04□□□□□ -2.4
PRE4YFR050C YCR095W-AQ3E787 52 aa0.03□□□□□ -2.4
PRE4YFR050C YKL068W-AQ3E826 78 aa0.03□□□□□ -2.4
PRE4YFR050C YOR304C-AO14468 76 aa0.02□□□□□ -2.41
PRE4YFR050C YFR009W-AP0C5M9 85 aa0.02□□□□□ -2.41
PRE4YFR050C PAU1P0CE88 120 aa0.02□□□□□ -2.41
PRE4YFR050C PAU14P0CE89 120 aa0.02□□□□□ -2.41
PRE4YFR050C PAU6P0CE90 120 aa0.02□□□□□ -2.41
PRE4YFR050C PAU18P0CE91 120 aa0.02□□□□□ -2.41
PRE4YFR050C PAU8P0CE92 120 aa0.02□□□□□ -2.41
PRE4YFR050C PAU11P0CE93 120 aa0.02□□□□□ -2.41
PRE4YFR050C PAU13P38725 120 aa0.02□□□□□ -2.41
PRE4YFR050C RSM18P40033 138 aa0.02□□□□□ -2.41
PRE4YFR050C PAU10Q03050 120 aa0.02□□□□□ -2.41
PRE4YFR050C PAU9Q3E770 120 aa0.02□□□□□ -2.41
PRE4YFR050C YJR107C-AP0CT86 78 aa0.01□□□□□ -2.41
PRE4YFR050C YBR090CP38253 122 aa0.01□□□□□ -2.41
PRE4YFR050C EDC1P53080 175 aaPredicted RBP0.01□□□□□ -2.41
PRE4YFR050C YIL134C-AQ45U18 67 aa0.01□□□□□ -2.41
PRE4YFR050C YHR213W-AQ8TGT4 77 aa0.01□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms