RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C YPL038W-AQ3E7B4 63 aa1.4□□□□□ -2.19
MSH4YFL003C URA2P07259 2214 aaKnown RBP1.39□□□□□ -2.19
MSH4YFL003C SPC1P46965 94 aa1.39□□□□□ -2.19
MSH4YFL003C YKL068W-AQ3E826 78 aa1.39□□□□□ -2.19
MSH4YFL003C MRP17P28778 131 aa1.38□□□□□ -2.19
MSH4YFL003C ICY1Q04329 127 aa1.38□□□□□ -2.19
MSH4YFL003C YBL071CP38185 102 aa1.38□□□□□ -2.19
MSH4YFL003C YDR210WQ03482 75 aa1.37□□□□□ -2.19
MSH4YFL003C MRPL38P35996 138 aaPredicted RBP1.37□□□□□ -2.19
MSH4YFL003C YLR255CO13574 117 aa1.36□□□□□ -2.19
MSH4YFL003C RPS27AP35997 82 aaKnown RBP1.36□□□□□ -2.19
MSH4YFL003C RPS27BP38711 82 aa1.36□□□□□ -2.19
MSH4YFL003C YGR035W-AQ45U48 73 aa1.36□□□□□ -2.19
MSH4YFL003C COX12Q01519 83 aa1.36□□□□□ -2.19
MSH4YFL003C MHF2Q3E829 80 aa1.36□□□□□ -2.19
MSH4YFL003C YHR213W-BQ8TGK1 99 aa1.36□□□□□ -2.19
MSH4YFL003C YJR128WP47162 119 aa1.36□□□□□ -2.19
MSH4YFL003C NHP2P32495 156 aaPredicted RBP1.35□□□□□ -2.19
MSH4YFL003C CWP2P43497 92 aa1.35□□□□□ -2.19
MSH4YFL003C YNR034W-AQ3E841 98 aa1.35□□□□□ -2.19
MSH4YFL003C YMR141CP40211 102 aa1.34□□□□□ -2.19
MSH4YFL003C MRX7P53869 86 aa1.34□□□□□ -2.19
MSH4YFL003C YFR010W-AP0C5N0 62 aa1.34□□□□□ -2.2
MSH4YFL003C PAU1P0CE88 120 aa1.33□□□□□ -2.2
MSH4YFL003C PAU14P0CE89 120 aa1.33□□□□□ -2.2
MSH4YFL003C PAU8P0CE92 120 aa1.33□□□□□ -2.2
MSH4YFL003C PAU11P0CE93 120 aa1.33□□□□□ -2.2
MSH4YFL003C PAU13P38725 120 aa1.33□□□□□ -2.2
MSH4YFL003C PAU10Q03050 120 aa1.33□□□□□ -2.2
MSH4YFL003C PAU20Q08322 120 aa1.33□□□□□ -2.2
MSH4YFL003C PAU9Q3E770 120 aa1.33□□□□□ -2.2
MSH4YFL003C YMR175W-AQ3E766 64 aa1.33□□□□□ -2.2
MSH4YFL003C SHU1P38751 150 aa1.32□□□□□ -2.2
MSH4YFL003C PAU4P53427 120 aa1.32□□□□□ -2.2
MSH4YFL003C AIM19P40502 157 aa1.31□□□□□ -2.2
MSH4YFL003C MPC2P38857 129 aa1.31□□□□□ -2.2
MSH4YFL003C RPL37AP49166 88 aaKnown RBP1.3□□□□□ -2.2
MSH4YFL003C BPH1P25356 2167 aa1.3□□□□□ -2.2
MSH4YFL003C YHR214C-DP0CX93 97 aa1.3□□□□□ -2.2
MSH4YFL003C YCR085WP25650 117 aa1.3□□□□□ -2.2
MSH4YFL003C RPA12P32529 125 aaKnown RBP1.3□□□□□ -2.2
MSH4YFL003C RPS11AP0CX47 156 aaKnown RBP1.29□□□□□ -2.2
MSH4YFL003C RPS11BP0CX48 156 aaKnown RBP1.29□□□□□ -2.2
MSH4YFL003C COX19Q3E731 98 aa1.29□□□□□ -2.2
MSH4YFL003C YOR034C-AQ3E735 80 aa1.29□□□□□ -2.2
MSH4YFL003C POC4Q12245 148 aaPredicted RBP1.28□□□□□ -2.2
MSH4YFL003C BSC4P53841 131 aa1.27□□□□□ -2.21
MSH4YFL003C AUA1P32450 94 aa1.26□□□□□ -2.21
MSH4YFL003C YBR292CP38357 123 aa1.26□□□□□ -2.21
MSH4YFL003C YOR343CQ12484 108 aa1.25□□□□□ -2.21
MSH4YFL003C YPR145C-AQ2V2P0 78 aa1.24□□□□□ -2.21
MSH4YFL003C SIP18P50263 79 aa1.23□□□□□ -2.21
MSH4YFL003C PAU23Q07987 124 aa1.23□□□□□ -2.21
MSH4YFL003C PAU17Q12370 124 aa1.23□□□□□ -2.21
MSH4YFL003C YDR010CQ12426 110 aa1.23□□□□□ -2.21
MSH4YFL003C TOM6P33448 61 aa1.23□□□□□ -2.21
MSH4YFL003C YHR173CP38864 112 aa1.23□□□□□ -2.21
MSH4YFL003C FPR2P32472 135 aa1.22□□□□□ -2.21
MSH4YFL003C LSM2P38203 95 aaKnown RBP1.22□□□□□ -2.21
MSH4YFL003C NCE101Q02820 53 aa1.22□□□□□ -2.21
MSH4YFL003C YBR072C-AQ3E794 53 aa1.22□□□□□ -2.21
MSH4YFL003C PDX3P38075 228 aaKnown RBP1.21□□□□□ -2.22
MSH4YFL003C YOR105WQ08504 108 aa1.21□□□□□ -2.22
MSH4YFL003C YNL042W-BQ3E7Z2 85 aa1.21□□□□□ -2.22
MSH4YFL003C YLR307C-AQ3E825 87 aa1.2□□□□□ -2.22
MSH4YFL003C RPL37BP51402 88 aaKnown RBP1.2□□□□□ -2.22
MSH4YFL003C YDR381C-AQ3E6R5 114 aa1.2□□□□□ -2.22
MSH4YFL003C YER188C-AP0C0V2 99 aa1.19□□□□□ -2.22
MSH4YFL003C YHR213W-AQ8TGT4 77 aa1.19□□□□□ -2.22
MSH4YFL003C Q0032Q9ZZX7 96 aa1.19□□□□□ -2.22
MSH4YFL003C YLR157W-EP0CF00 54 aa1.19□□□□□ -2.22
MSH4YFL003C YBR201C-AQ2V2Q3 67 aa1.19□□□□□ -2.22
MSH4YFL003C YAL065CO13511 128 aa1.19□□□□□ -2.22
MSH4YFL003C NOP10Q6Q547 58 aaPredicted RBP1.19□□□□□ -2.22
MSH4YFL003C YIL156W-BQ2V2P4 73 aa1.18□□□□□ -2.22
MSH4YFL003C YMR122W-AQ3E842 84 aa1.18□□□□□ -2.22
MSH4YFL003C YOR314WQ12506 109 aa1.17□□□□□ -2.22
MSH4YFL003C RPC10P40422 70 aa1.16□□□□□ -2.22
MSH4YFL003C YKL065W-AQ2V2P2 73 aa1.16□□□□□ -2.22
MSH4YFL003C YDR119W-AQ2V2P9 66 aa1.16□□□□□ -2.22
MSH4YFL003C SWM2P40342 146 aa1.14□□□□□ -2.23
MSH4YFL003C COX7P10174 60 aa1.14□□□□□ -2.23
MSH4YFL003C ATP18P81450 59 aa1.13□□□□□ -2.23
MSH4YFL003C HOR7Q05827 59 aa1.13□□□□□ -2.23
MSH4YFL003C YOL164W-AQ3E7A5 60 aa1.13□□□□□ -2.23
MSH4YFL003C PAI3P01094 68 aa1.12□□□□□ -2.23
MSH4YFL003C RPL38P49167 78 aaKnown RBP1.12□□□□□ -2.23
MSH4YFL003C YJR107C-AP0CT86 78 aa1.11□□□□□ -2.23
MSH4YFL003C QCR9P22289 66 aa1.11□□□□□ -2.23
MSH4YFL003C TIM12P32830 109 aa1.11□□□□□ -2.23
MSH4YFL003C YGR121W-AQ3E816 71 aa1.11□□□□□ -2.23
MSH4YFL003C RPL39P04650 51 aa1.1□□□□□ -2.23
MSH4YFL003C YNL190WP53872 204 aa1.1□□□□□ -2.23
MSH4YFL003C SGF11Q03067 99 aa1.1□□□□□ -2.23
MSH4YFL003C YNL198CP40166 100 aa1.09□□□□□ -2.24
MSH4YFL003C YDL022C-AP0C5L6 82 aa1.08□□□□□ -2.24
MSH4YFL003C SDH6Q3E785 79 aa1.08□□□□□ -2.24
MSH4YFL003C ATX1P38636 73 aa1.07□□□□□ -2.24
MSH4YFL003C YMR105W-AQ8TGS8 64 aa1.07□□□□□ -2.24
MSH4YFL003C YOL097W-AQ3E7Y9 61 aa1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms