RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W IRC21Q04772 201 aa1.41□□□□□ -2.18
PRE1YER012W YGR121W-AQ3E816 71 aa1.41□□□□□ -2.18
PRE1YER012W KTI11Q3E840 82 aa1.41□□□□□ -2.18
PRE1YER012W QCR8P08525 94 aa1.4□□□□□ -2.19
PRE1YER012W SKI6P46948 246 aaPredicted RBP1.4□□□□□ -2.19
PRE1YER012W CMC4Q3E7A9 73 aa1.4□□□□□ -2.19
PRE1YER012W YNL042W-BQ3E7Z2 85 aa1.4□□□□□ -2.19
PRE1YER012W YJL127C-BQ3E828 52 aa1.4□□□□□ -2.19
PRE1YER012W YIL134C-AQ45U18 67 aa1.4□□□□□ -2.19
PRE1YER012W YLR236CA0A023PZG4 107 aa1.39□□□□□ -2.19
PRE1YER012W YGL230CP53074 147 aa1.39□□□□□ -2.19
PRE1YER012W ICY1Q04329 127 aa1.39□□□□□ -2.19
PRE1YER012W YML100W-AQ8TGT0 57 aa1.39□□□□□ -2.19
PRE1YER012W ATP5P09457 212 aa1.38□□□□□ -2.19
PRE1YER012W CUE4Q04201 117 aaPredicted RBP1.38□□□□□ -2.19
PRE1YER012W KSH1Q8TGJ3 72 aa1.38□□□□□ -2.19
PRE1YER012W HAP3P13434 144 aa1.37□□□□□ -2.19
PRE1YER012W FYV5P25585 152 aa1.37□□□□□ -2.19
PRE1YER012W SSS1P35179 80 aa1.37□□□□□ -2.19
PRE1YER012W YLR162WQ06235 118 aa1.37□□□□□ -2.19
PRE1YER012W YDL157CQ12082 118 aa1.37□□□□□ -2.19
PRE1YER012W YER039C-AP0CD97 72 aa1.36□□□□□ -2.19
PRE1YER012W YKL044WP36092 106 aa1.36□□□□□ -2.19
PRE1YER012W RSM18P40033 138 aa1.36□□□□□ -2.19
PRE1YER012W MSL1P40567 111 aaPredicted RBP1.36□□□□□ -2.19
PRE1YER012W ZEO1Q08245 113 aa1.36□□□□□ -2.19
PRE1YER012W YOR072WQ08486 104 aa1.36□□□□□ -2.19
PRE1YER012W FYV12Q08559 129 aa1.36□□□□□ -2.19
PRE1YER012W YLR050CQ12155 161 aaKnown RBP1.36□□□□□ -2.19
PRE1YER012W PAU17Q12370 124 aa1.35□□□□□ -2.19
PRE1YER012W YDL085C-AQ3E7B7 68 aaKnown RBP1.35□□□□□ -2.19
PRE1YER012W RPL36BO14455 100 aaKnown RBP1.34□□□□□ -2.19
PRE1YER012W YHL005CP38752 130 aa1.34□□□□□ -2.19
PRE1YER012W YNL122CP53921 115 aaPredicted RBP1.34□□□□□ -2.19
PRE1YER012W SHH4Q06236 168 aa1.34□□□□□ -2.19
PRE1YER012W NAT5Q08689 176 aa1.34□□□□□ -2.19
PRE1YER012W MRPL24P36525 258 aaPredicted RBP1.33□□□□□ -2.2
PRE1YER012W CNL1Q06333 122 aa1.32□□□□□ -2.2
PRE1YER012W YHL018WP38744 120 aaPredicted RBP1.31□□□□□ -2.2
PRE1YER012W SBH1P52870 82 aa1.31□□□□□ -2.2
PRE1YER012W EDC1P53080 175 aaPredicted RBP1.31□□□□□ -2.2
PRE1YER012W YFR009W-AP0C5M9 85 aa1.3□□□□□ -2.2
PRE1YER012W YHR130CP38834 111 aa1.3□□□□□ -2.2
PRE1YER012W CWC27Q02770 301 aa1.3□□□□□ -2.2
PRE1YER012W ELC1Q03071 99 aa1.3□□□□□ -2.2
PRE1YER012W PAU23Q07987 124 aa1.3□□□□□ -2.2
PRE1YER012W FUN14P18411 198 aa1.29□□□□□ -2.2
PRE1YER012W YLR296WQ05898 108 aa1.29□□□□□ -2.2
PRE1YER012W ATP20Q12233 115 aa1.29□□□□□ -2.2
PRE1YER012W YLR412C-AQ3E742 68 aa1.29□□□□□ -2.2
PRE1YER012W MIC10Q96VH5 97 aa1.29□□□□□ -2.2
PRE1YER012W COX8P04039 78 aa1.28□□□□□ -2.2
PRE1YER012W HUR1P45820 110 aa1.28□□□□□ -2.2
PRE1YER012W YJR128WP47162 119 aa1.27□□□□□ -2.21
PRE1YER012W RSM19P53733 91 aaPredicted RBP1.27□□□□□ -2.21
PRE1YER012W COA6Q3E846 104 aa1.27□□□□□ -2.21
PRE1YER012W YHR213W-BQ8TGK1 99 aa1.27□□□□□ -2.21
PRE1YER012W YJR107C-AP0CT86 78 aa1.26□□□□□ -2.21
PRE1YER012W LSM6Q06406 86 aaKnown RBP1.26□□□□□ -2.21
PRE1YER012W YJL133C-AQ3E7A3 74 aa1.26□□□□□ -2.21
PRE1YER012W YOL097W-AQ3E7Y9 61 aa1.26□□□□□ -2.21
PRE1YER012W NHP2P32495 156 aaPredicted RBP1.25□□□□□ -2.21
PRE1YER012W YER181CP40097 107 aa1.25□□□□□ -2.21
PRE1YER012W ICS3P47034 131 aa1.25□□□□□ -2.21
PRE1YER012W YJL009WP47078 108 aa1.25□□□□□ -2.21
PRE1YER012W ATP18P81450 59 aa1.25□□□□□ -2.21
PRE1YER012W PAI3P01094 68 aa1.24□□□□□ -2.21
PRE1YER012W YLR157W-DP0CE99 70 aa1.24□□□□□ -2.21
PRE1YER012W COX7P10174 60 aa1.24□□□□□ -2.21
PRE1YER012W YNL198CP40166 100 aa1.24□□□□□ -2.21
PRE1YER012W YDR210WQ03482 75 aa1.24□□□□□ -2.21
PRE1YER012W FYV7Q12247 151 aa1.24□□□□□ -2.21
PRE1YER012W YDR381C-AQ3E6R5 114 aa1.24□□□□□ -2.21
PRE1YER012W YLR361C-AQ3E795 98 aa1.24□□□□□ -2.21
PRE1YER012W SFT1P43682 97 aa1.23□□□□□ -2.21
PRE1YER012W YLR363W-AQ3E747 85 aa1.23□□□□□ -2.21
PRE1YER012W POP7P38291 140 aa1.22□□□□□ -2.21
PRE1YER012W COX23P38824 151 aa1.21□□□□□ -2.22
PRE1YER012W YER187WP40102 141 aa1.21□□□□□ -2.22
PRE1YER012W COF1Q03048 143 aaKnown RBP1.21□□□□□ -2.22
PRE1YER012W YOR381W-AQ3E804 55 aa1.21□□□□□ -2.22
PRE1YER012W YOR316C-AQ3E806 69 aa1.21□□□□□ -2.22
PRE1YER012W YHR073W-AP0C5N7 58 aa1.2□□□□□ -2.22
PRE1YER012W SAE3P89114 91 aa1.2□□□□□ -2.22
PRE1YER012W YPR153WQ06537 140 aa1.2□□□□□ -2.22
PRE1YER012W RAD6P06104 172 aa1.19□□□□□ -2.22
PRE1YER012W RPS28BP0C0X0 67 aaKnown RBP1.19□□□□□ -2.22
PRE1YER012W RPL38P49167 78 aaKnown RBP1.19□□□□□ -2.22
PRE1YER012W YGR164WP53291 111 aa1.19□□□□□ -2.22
PRE1YER012W YIL102C-AQ2V2P5 75 aa1.19□□□□□ -2.22
PRE1YER012W RPS28AQ3E7X9 67 aaPredicted RBP1.19□□□□□ -2.22
PRE1YER012W YHL042WP38729 150 aa1.18□□□□□ -2.22
PRE1YER012W YFL065CP43539 102 aa1.18□□□□□ -2.22
PRE1YER012W RPL36AP05745 100 aaPredicted RBP1.17□□□□□ -2.22
PRE1YER012W YAR064WP39563 99 aa1.17□□□□□ -2.22
PRE1YER012W RPA12P32529 125 aaKnown RBP1.16□□□□□ -2.22
PRE1YER012W Q0017Q9ZZX8 53 aa1.16□□□□□ -2.22
PRE1YER012W PBI2P0CT04 75 aaKnown RBP1.15□□□□□ -2.23
PRE1YER012W LSM8P47093 109 aaKnown RBP1.15□□□□□ -2.23
PRE1YER012W LIP1Q03579 150 aa1.14□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms