RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W YER188C-AP0C0V2 99 aa1.76□□□□□ -2.13
SPF1YEL031W AQY2P0CD90 149 aa1.76□□□□□ -2.13
SPF1YEL031W RPS30AP0CX33 63 aaKnown RBP1.76□□□□□ -2.13
SPF1YEL031W RPS30BP0CX34 63 aaKnown RBP1.76□□□□□ -2.13
SPF1YEL031W RPB9P27999 122 aa1.76□□□□□ -2.13
SPF1YEL031W SDH6Q3E785 79 aa1.76□□□□□ -2.13
SPF1YEL031W YOL166W-AQ8TGJ1 51 aa1.76□□□□□ -2.13
SPF1YEL031W EDC1P53080 175 aaPredicted RBP1.76□□□□□ -2.13
SPF1YEL031W SMD1Q02260 146 aaPredicted RBP1.76□□□□□ -2.13
SPF1YEL031W LIP1Q03579 150 aa1.76□□□□□ -2.13
SPF1YEL031W ECM19Q06011 112 aa1.76□□□□□ -2.13
SPF1YEL031W YGR035W-AQ45U48 73 aa1.76□□□□□ -2.13
SPF1YEL031W RPC10P40422 70 aa1.76□□□□□ -2.13
SPF1YEL031W GLT1Q12680 2145 aaKnown RBP1.75□□□□□ -2.13
SPF1YEL031W YCR043CP25361 127 aa1.75□□□□□ -2.13
SPF1YEL031W YJL127C-BQ3E828 52 aa1.75□□□□□ -2.13
SPF1YEL031W YML100W-AQ8TGT0 57 aa1.75□□□□□ -2.13
SPF1YEL031W TOM1Q03280 3268 aa1.75□□□□□ -2.13
SPF1YEL031W YNL042W-BQ3E7Z2 85 aa1.75□□□□□ -2.13
SPF1YEL031W YHR213W-BQ8TGK1 99 aa1.75□□□□□ -2.13
SPF1YEL031W YAR023CD6VPM8 179 aa1.74□□□□□ -2.13
SPF1YEL031W YBR219CP38317 127 aa1.74□□□□□ -2.13
SPF1YEL031W YLR122CQ12312 125 aa1.74□□□□□ -2.13
SPF1YEL031W YBR230W-AQ3E762 66 aa1.74□□□□□ -2.13
SPF1YEL031W YCR095W-AQ3E787 52 aa1.74□□□□□ -2.13
SPF1YEL031W YPR153WQ06537 140 aa1.74□□□□□ -2.13
SPF1YEL031W RDS3Q06835 107 aaPredicted RBP1.74□□□□□ -2.13
SPF1YEL031W TMC1Q08422 150 aaPredicted RBP1.74□□□□□ -2.13
SPF1YEL031W YJL133C-AQ3E7A3 74 aa1.74□□□□□ -2.13
SPF1YEL031W SEC16P48415 2195 aaKnown RBP1.74□□□□□ -2.13
SPF1YEL031W DDR2P89113 61 aa1.74□□□□□ -2.13
SPF1YEL031W YOR268CQ08734 132 aa1.74□□□□□ -2.13
SPF1YEL031W YNL162W-AQ3E7A8 72 aa1.74□□□□□ -2.13
SPF1YEL031W RRT15Q3E811 62 aa1.74□□□□□ -2.13
SPF1YEL031W SEN1Q00416 2231 aaKnown RBP1.74□□□□□ -2.13
SPF1YEL031W ACC1Q00955 2233 aaKnown RBP1.74□□□□□ -2.13
SPF1YEL031W FAB1P34756 2278 aa1.73□□□□□ -2.13
SPF1YEL031W YPR013CQ12145 317 aa1.73□□□□□ -2.13
SPF1YEL031W YCR001WP25347 104 aa1.73□□□□□ -2.13
SPF1YEL031W YGL041C-BQ3E750 60 aa1.73□□□□□ -2.13
SPF1YEL031W YLR157W-DP0CE99 70 aa1.73□□□□□ -2.13
SPF1YEL031W YGL193CP53097 103 aa1.73□□□□□ -2.13
SPF1YEL031W YGR025WP53216 100 aa1.73□□□□□ -2.13
SPF1YEL031W YOL013W-AP0C272 63 aaPredicted RBP1.72□□□□□ -2.13
SPF1YEL031W YGL034CP53186 121 aa1.72□□□□□ -2.13
SPF1YEL031W YDR034W-BQ6Q5X2 51 aa1.72□□□□□ -2.13
SPF1YEL031W TRA1P38811 3744 aa1.72□□□□□ -2.13
SPF1YEL031W ATP17Q06405 101 aa1.72□□□□□ -2.13
SPF1YEL031W YMR001C-AQ8TGS9 76 aa1.72□□□□□ -2.13
SPF1YEL031W YER175W-AQ8TGU4 54 aa1.72□□□□□ -2.13
SPF1YEL031W Q0032Q9ZZX7 96 aa1.72□□□□□ -2.13
SPF1YEL031W WWM1P43582 211 aaKnown RBP1.71□□□□□ -2.14
SPF1YEL031W BSC4P53841 131 aa1.71□□□□□ -2.14
SPF1YEL031W BRR2P32639 2163 aaKnown RBP1.71□□□□□ -2.14
SPF1YEL031W YOL014WQ08110 124 aa1.71□□□□□ -2.14
SPF1YEL031W YHR125WP38831 101 aa1.7□□□□□ -2.14
SPF1YEL031W SNA2P56508 79 aa1.7□□□□□ -2.14
SPF1YEL031W YEL045CP32616 141 aa1.7□□□□□ -2.14
SPF1YEL031W YGL149WP53116 101 aa1.7□□□□□ -2.14
SPF1YEL031W SGF11Q03067 99 aa1.7□□□□□ -2.14
SPF1YEL031W YOR072WQ08486 104 aa1.7□□□□□ -2.14
SPF1YEL031W YAR064WP39563 99 aa1.7□□□□□ -2.14
SPF1YEL031W RPL33AP05744 107 aaKnown RBP1.69□□□□□ -2.14
SPF1YEL031W YBR027CP38220 110 aa1.69□□□□□ -2.14
SPF1YEL031W RPL33BP41056 107 aaKnown RBP1.69□□□□□ -2.14
SPF1YEL031W YPL278CQ08990 100 aa1.69□□□□□ -2.14
SPF1YEL031W VPS13Q07878 3144 aa1.69□□□□□ -2.14
SPF1YEL031W YAL064WP39711 94 aa1.69□□□□□ -2.14
SPF1YEL031W YER145C-AA0A023PYF4 145 aa1.68□□□□□ -2.14
SPF1YEL031W YOR376W-AQ3E805 51 aa1.68□□□□□ -2.14
SPF1YEL031W TAR1Q8TGM6 124 aa1.68□□□□□ -2.14
SPF1YEL031W MRX7P53869 86 aa1.68□□□□□ -2.14
SPF1YEL031W RTC6O14464 93 aa1.67□□□□□ -2.14
SPF1YEL031W DDR48P18899 430 aaKnown RBP1.67□□□□□ -2.14
SPF1YEL031W YBL081WP38180 368 aaKnown RBP1.67□□□□□ -2.14
SPF1YEL031W QCR10P37299 77 aa1.67□□□□□ -2.14
SPF1YEL031W IGD1P43598 195 aa1.67□□□□□ -2.14
SPF1YEL031W YNL122CP53921 115 aaPredicted RBP1.67□□□□□ -2.14
SPF1YEL031W YDR010CQ12426 110 aa1.67□□□□□ -2.14
SPF1YEL031W DYN1P36022 4092 aa1.66□□□□□ -2.14
SPF1YEL031W AUA1P32450 94 aa1.66□□□□□ -2.14
SPF1YEL031W YFR032C-BQ8TGU2 87 aa1.66□□□□□ -2.14
SPF1YEL031W YOL097W-AQ3E7Y9 61 aa1.66□□□□□ -2.14
SPF1YEL031W YHR212W-AP0CX91 67 aa1.65□□□□□ -2.14
SPF1YEL031W YHR007C-AQ07074 71 aa1.65□□□□□ -2.14
SPF1YEL031W TAO3P40468 2376 aa1.65□□□□□ -2.15
SPF1YEL031W YGL260WP53056 76 aa1.65□□□□□ -2.15
SPF1YEL031W YBR201C-AQ2V2Q3 67 aa1.64□□□□□ -2.15
SPF1YEL031W BPH1P25356 2167 aa1.64□□□□□ -2.15
SPF1YEL031W YCR041WP37265 110 aa1.64□□□□□ -2.15
SPF1YEL031W YDR115WQ04598 105 aa1.64□□□□□ -2.15
SPF1YEL031W SOM1Q05676 74 aa1.63□□□□□ -2.15
SPF1YEL031W YIL156W-BQ2V2P4 73 aa1.63□□□□□ -2.15
SPF1YEL031W YJL197C-AP0C5P0 93 aa1.62□□□□□ -2.15
SPF1YEL031W Q0297Q9ZZV8 51 aa1.62□□□□□ -2.15
SPF1YEL031W COX8P04039 78 aa1.62□□□□□ -2.15
SPF1YEL031W YHR073W-AP0C5N7 58 aa1.62□□□□□ -2.15
SPF1YEL031W YGL014C-AP0C5N1 53 aa1.61□□□□□ -2.15
SPF1YEL031W YGR146C-AQ8TGT9 53 aa1.61□□□□□ -2.15
SPF1YEL031W YBL008W-AQ3E821 79 aa1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms