RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C YOR343CQ12484 108 aa0.39□□□□□ -2.35
LSM6YDR378C MIC10Q96VH5 97 aa0.39□□□□□ -2.35
LSM6YDR378C RRT15Q3E811 62 aa0.38□□□□□ -2.35
LSM6YDR378C LHP1P33399 275 aaKnown RBP0.37□□□□□ -2.35
LSM6YDR378C RUB1Q03919 77 aa0.36□□□□□ -2.35
LSM6YDR378C ROX3P25046 220 aa0.35□□□□□ -2.35
LSM6YDR378C RPS12P48589 143 aaKnown RBP0.35□□□□□ -2.35
LSM6YDR378C YOL131WQ08270 108 aa0.35□□□□□ -2.35
LSM6YDR378C SNU13P39990 126 aaKnown RBP0.34□□□□□ -2.36
LSM6YDR378C MRX7P53869 86 aa0.34□□□□□ -2.36
LSM6YDR378C YMR103CQ04436 120 aa0.34□□□□□ -2.36
LSM6YDR378C YCR095W-AQ3E787 52 aa0.34□□□□□ -2.36
LSM6YDR378C YOR011W-AQ3E807 68 aa0.34□□□□□ -2.36
LSM6YDR378C YDR034C-AP0C289 58 aa0.33□□□□□ -2.36
LSM6YDR378C TIM12P32830 109 aa0.33□□□□□ -2.36
LSM6YDR378C MRPL38P35996 138 aaPredicted RBP0.33□□□□□ -2.36
LSM6YDR378C YOR192C-CQ3E736 78 aa0.33□□□□□ -2.36
LSM6YDR378C UBC4P15731 148 aa0.32□□□□□ -2.36
LSM6YDR378C RGI1P40043 161 aaPredicted RBP0.32□□□□□ -2.36
LSM6YDR378C TOM7P53507 60 aa0.32□□□□□ -2.36
LSM6YDR378C ICY1Q04329 127 aa0.32□□□□□ -2.36
LSM6YDR378C YKL018C-AQ3E7A7 99 aa0.32□□□□□ -2.36
LSM6YDR378C YLL066W-BQ8TGJ7 56 aa0.32□□□□□ -2.36
LSM6YDR378C MRP17P28778 131 aa0.31□□□□□ -2.36
LSM6YDR378C SNA2P56508 79 aa0.31□□□□□ -2.36
LSM6YDR378C SGF11Q03067 99 aa0.31□□□□□ -2.36
LSM6YDR378C NHP10Q03435 203 aa0.31□□□□□ -2.36
LSM6YDR378C YBR292CP38357 123 aa0.3□□□□□ -2.36
LSM6YDR378C RPS29AP41057 56 aaKnown RBP0.3□□□□□ -2.36
LSM6YDR378C YMR090WQ04304 227 aaKnown RBP0.3□□□□□ -2.36
LSM6YDR378C YOR289WQ12012 251 aaPredicted RBP0.28□□□□□ -2.36
LSM6YDR378C PDX3P38075 228 aaKnown RBP0.27□□□□□ -2.37
LSM6YDR378C ATX1P38636 73 aa0.26□□□□□ -2.37
LSM6YDR378C UBC5P15732 148 aa0.25□□□□□ -2.37
LSM6YDR378C YNL198CP40166 100 aa0.25□□□□□ -2.37
LSM6YDR378C PAU5P43575 122 aa0.25□□□□□ -2.37
LSM6YDR378C PAU6P0CE90 120 aa0.24□□□□□ -2.37
LSM6YDR378C PAU18P0CE91 120 aa0.24□□□□□ -2.37
LSM6YDR378C PAU20Q08322 120 aa0.24□□□□□ -2.37
LSM6YDR378C MHF2Q3E829 80 aa0.23□□□□□ -2.37
LSM6YDR378C YBR090CP38253 122 aa0.22□□□□□ -2.37
LSM6YDR378C RSM18P40033 138 aa0.22□□□□□ -2.37
LSM6YDR378C YNR034W-AQ3E841 98 aa0.22□□□□□ -2.37
LSM6YDR378C AIM19P40502 157 aa0.21□□□□□ -2.38
LSM6YDR378C SPC1P46965 94 aa0.21□□□□□ -2.38
LSM6YDR378C YDR029WQ12111 104 aa0.21□□□□□ -2.38
LSM6YDR378C RPC10P40422 70 aa0.2□□□□□ -2.38
LSM6YDR378C LSM2P38203 95 aaKnown RBP0.17□□□□□ -2.38
LSM6YDR378C SMX2P40204 77 aaKnown RBP0.17□□□□□ -2.38
LSM6YDR378C YCR075W-AQ3E830 75 aa0.17□□□□□ -2.38
LSM6YDR378C KSH1Q8TGJ3 72 aa0.17□□□□□ -2.38
LSM6YDR378C YBL071CP38185 102 aa0.16□□□□□ -2.38
LSM6YDR378C RSM19P53733 91 aaPredicted RBP0.16□□□□□ -2.38
LSM6YDR378C POC4Q12245 148 aaPredicted RBP0.16□□□□□ -2.38
LSM6YDR378C YBR032WP38223 100 aa0.15□□□□□ -2.39
LSM6YDR378C YHL005CP38752 130 aa0.15□□□□□ -2.39
LSM6YDR378C YPR108W-AQ3E7B3 70 aa0.15□□□□□ -2.39
LSM6YDR378C YBR016WP38216 128 aa0.14□□□□□ -2.39
LSM6YDR378C EMC5P40540 141 aa0.14□□□□□ -2.39
LSM6YDR378C CWP2P43497 92 aa0.14□□□□□ -2.39
LSM6YDR378C PAU1P0CE88 120 aa0.13□□□□□ -2.39
LSM6YDR378C PAU14P0CE89 120 aa0.13□□□□□ -2.39
LSM6YDR378C PAU8P0CE92 120 aa0.13□□□□□ -2.39
LSM6YDR378C PAU11P0CE93 120 aa0.13□□□□□ -2.39
LSM6YDR378C PAU13P38725 120 aa0.13□□□□□ -2.39
LSM6YDR378C PAU10Q03050 120 aa0.13□□□□□ -2.39
LSM6YDR378C PAU9Q3E770 120 aa0.13□□□□□ -2.39
LSM6YDR378C ECM12O13529 151 aa0.11□□□□□ -2.39
LSM6YDR378C YFR009W-AP0C5M9 85 aa0.11□□□□□ -2.39
LSM6YDR378C YGL258W-AQ3E740 77 aa0.11□□□□□ -2.39
LSM6YDR378C YBR200W-AQ3E755 54 aa0.11□□□□□ -2.39
LSM6YDR378C SPI1P40092 148 aa0.1□□□□□ -2.39
LSM6YDR378C YPR145C-AQ2V2P0 78 aa0.09□□□□□ -2.4
LSM6YDR378C YMR122W-AQ3E842 84 aa0.09□□□□□ -2.4
LSM6YDR378C PMP3P87284 55 aa0.08□□□□□ -2.4
LSM6YDR378C Q0032Q9ZZX7 96 aa0.08□□□□□ -2.4
LSM6YDR378C HMRA1P0CY11 126 aa0.07□□□□□ -2.4
LSM6YDR378C RPL38P49167 78 aaKnown RBP0.07□□□□□ -2.4
LSM6YDR378C YNL042W-BQ3E7Z2 85 aa0.07□□□□□ -2.4
LSM6YDR378C COA2Q3E823 68 aa0.07□□□□□ -2.4
LSM6YDR378C YJR107C-AP0CT86 78 aa0.06□□□□□ -2.4
LSM6YDR378C PAU4P53427 120 aa0.06□□□□□ -2.4
LSM6YDR378C BSC4P53841 131 aa0.06□□□□□ -2.4
LSM6YDR378C YPR010C-AA5Z2X5 72 aa0.05□□□□□ -2.4
LSM6YDR378C YAL065CO13511 128 aa0.05□□□□□ -2.4
LSM6YDR378C COX9P07255 59 aa0.05□□□□□ -2.4
LSM6YDR378C TOS6P48560 102 aa0.05□□□□□ -2.4
LSM6YDR378C ERI1P62651 68 aaKnown RBP0.05□□□□□ -2.4
LSM6YDR378C DDR2P89113 61 aa0.05□□□□□ -2.4
LSM6YDR378C YMR082CQ04276 118 aa0.05□□□□□ -2.4
LSM6YDR378C COX7P10174 60 aa0.04□□□□□ -2.4
LSM6YDR378C SCP1Q08873 200 aa0.04□□□□□ -2.4
LSM6YDR378C Q0017Q9ZZX8 53 aa0.04□□□□□ -2.4
LSM6YDR378C YGR121W-AQ3E816 71 aa0.03□□□□□ -2.4
LSM6YDR378C FPR2P32472 135 aa0.02□□□□□ -2.41
LSM6YDR378C YDR042CQ03205 200 aa0.02□□□□□ -2.41
LSM6YDR378C YHR073W-AP0C5N7 58 aa0.01□□□□□ -2.41
LSM6YDR378C SWM2P40342 146 aa0.01□□□□□ -2.41
LSM6YDR378C FYV7Q12247 151 aa0.01□□□□□ -2.41
LSM6YDR378C YBL044WP38194 122 aa0□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms