RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W RAD6P06104 172 aa0.66□□□□□ -2.3
SCC2YDR180W PBI2P0CT04 75 aaKnown RBP0.66□□□□□ -2.3
SCC2YDR180W YSF3P0C074 85 aaPredicted RBP0.65□□□□□ -2.3
SCC2YDR180W IRC21Q04772 201 aa0.65□□□□□ -2.3
SCC2YDR180W CCW12Q12127 133 aa0.65□□□□□ -2.3
SCC2YDR180W YOL085CQ99345 113 aa0.65□□□□□ -2.3
SCC2YDR180W RPL26AP05743 127 aaKnown RBP0.65□□□□□ -2.31
SCC2YDR180W YHR125WP38831 101 aa0.65□□□□□ -2.31
SCC2YDR180W YGL149WP53116 101 aa0.65□□□□□ -2.31
SCC2YDR180W MRPS8Q03799 155 aa0.65□□□□□ -2.31
SCC2YDR180W YOR020W-AQ3E824 90 aa0.65□□□□□ -2.31
SCC2YDR180W YCL042WP25572 119 aa0.65□□□□□ -2.31
SCC2YDR180W YBL071CP38185 102 aa0.65□□□□□ -2.31
SCC2YDR180W AIM4P38305 123 aaPredicted RBP0.65□□□□□ -2.31
SCC2YDR180W YMR295CQ03559 197 aa0.65□□□□□ -2.31
SCC2YDR180W RDS3Q06835 107 aaPredicted RBP0.65□□□□□ -2.31
SCC2YDR180W TSC3Q3E790 80 aa0.65□□□□□ -2.31
SCC2YDR180W YOR032W-AQ8TGS1 66 aa0.65□□□□□ -2.31
SCC2YDR180W RPS30AP0CX33 63 aaKnown RBP0.64□□□□□ -2.31
SCC2YDR180W RPS30BP0CX34 63 aaKnown RBP0.64□□□□□ -2.31
SCC2YDR180W BET1P22804 142 aa0.64□□□□□ -2.31
SCC2YDR180W YEL008WP40001 126 aa0.64□□□□□ -2.31
SCC2YDR180W YML079WQ03629 201 aa0.64□□□□□ -2.31
SCC2YDR180W YDR114CQ04597 100 aa0.64□□□□□ -2.31
SCC2YDR180W YPR153WQ06537 140 aa0.64□□□□□ -2.31
SCC2YDR180W YDL012CQ12489 107 aa0.64□□□□□ -2.31
SCC2YDR180W YDR034W-BQ6Q5X2 51 aa0.64□□□□□ -2.31
SCC2YDR180W RSM18P40033 138 aa0.64□□□□□ -2.31
SCC2YDR180W YER084WP40057 128 aa0.64□□□□□ -2.31
SCC2YDR180W DAD4P69851 72 aa0.64□□□□□ -2.31
SCC2YDR180W EMC6Q12431 108 aa0.64□□□□□ -2.31
SCC2YDR180W RPL29P05747 59 aaPredicted RBP0.64□□□□□ -2.31
SCC2YDR180W FYV5P25585 152 aa0.64□□□□□ -2.31
SCC2YDR180W YLR285C-AQ3E771 56 aa0.64□□□□□ -2.31
SCC2YDR180W YNL042W-BQ3E7Z2 85 aa0.64□□□□□ -2.31
SCC2YDR180W YMR122W-AQ3E842 84 aa0.64□□□□□ -2.31
SCC2YDR180W HFA1P32874 2273 aa0.63□□□□□ -2.31
SCC2YDR180W YOL013W-AP0C272 63 aaPredicted RBP0.63□□□□□ -2.31
SCC2YDR180W MPC3P53311 146 aa0.63□□□□□ -2.31
SCC2YDR180W YKL065W-AQ2V2P2 73 aa0.63□□□□□ -2.31
SCC2YDR180W RPS23AP0CX29 145 aaKnown RBP0.63□□□□□ -2.31
SCC2YDR180W RPS23BP0CX30 145 aa0.63□□□□□ -2.31
SCC2YDR180W YDR010CQ12426 110 aa0.63□□□□□ -2.31
SCC2YDR180W YOR381W-AQ3E804 55 aa0.63□□□□□ -2.31
SCC2YDR180W RTC6O14464 93 aa0.63□□□□□ -2.31
SCC2YDR180W RPL26BP53221 127 aaKnown RBP0.63□□□□□ -2.31
SCC2YDR180W ATP18P81450 59 aa0.63□□□□□ -2.31
SCC2YDR180W LIP1Q03579 150 aa0.63□□□□□ -2.31
SCC2YDR180W YRA2P36036 203 aaKnown RBP RIP-Chip data0.62□□□□□ -2.31not detected
SCC2YDR180W YBR027CP38220 110 aa0.62□□□□□ -2.31
SCC2YDR180W SIP18P50263 79 aa0.62□□□□□ -2.31
SCC2YDR180W YAR023CD6VPM8 179 aa0.62□□□□□ -2.31
SCC2YDR180W YPR195CQ06594 109 aa0.62□□□□□ -2.31
SCC2YDR180W TAR1Q8TGM6 124 aa0.62□□□□□ -2.31
SCC2YDR180W YJR107C-AP0CT86 78 aa0.62□□□□□ -2.31
SCC2YDR180W COX23P38824 151 aa0.62□□□□□ -2.31
SCC2YDR180W MRX7P53869 86 aa0.62□□□□□ -2.31
SCC2YDR180W LCL2Q08045 131 aa0.62□□□□□ -2.31
SCC2YDR180W YDR524C-BQ3E6R4 66 aa0.62□□□□□ -2.31
SCC2YDR180W YOR008C-AQ3E7B9 74 aa0.62□□□□□ -2.31
SCC2YDR180W YLL066W-BQ8TGJ7 56 aa0.62□□□□□ -2.31
SCC2YDR180W YPR010C-AA5Z2X5 72 aa0.61□□□□□ -2.31
SCC2YDR180W YLR255CO13574 117 aa0.61□□□□□ -2.31
SCC2YDR180W YER135CP40082 130 aa0.61□□□□□ -2.31
SCC2YDR180W YGL088WP53151 121 aa0.61□□□□□ -2.31
SCC2YDR180W BSC4P53841 131 aa0.61□□□□□ -2.31
SCC2YDR180W FMP27Q06179 2628 aa0.61□□□□□ -2.31
SCC2YDR180W HSP12P22943 109 aaKnown RBP0.61□□□□□ -2.31
SCC2YDR180W AUA1P32450 94 aa0.61□□□□□ -2.31
SCC2YDR180W POR2P40478 281 aa0.61□□□□□ -2.31
SCC2YDR180W QCR8P08525 94 aa0.61□□□□□ -2.31
SCC2YDR180W AQY2P0CD90 149 aa0.61□□□□□ -2.31
SCC2YDR180W RRT1P38192 103 aa0.61□□□□□ -2.31
SCC2YDR180W YAL064WP39711 94 aa0.6□□□□□ -2.31
SCC2YDR180W YLL006W-AQ3E814 58 aa0.6□□□□□ -2.31
SCC2YDR180W RPL43AP0CX25 92 aaKnown RBP0.6□□□□□ -2.31
SCC2YDR180W RPL43BP0CX26 92 aa0.6□□□□□ -2.31
SCC2YDR180W YNL146C-AQ3E7Z1 64 aa0.6□□□□□ -2.31
SCC2YDR180W YDL241WQ07738 123 aa0.6□□□□□ -2.31
SCC2YDR180W OST5Q92316 86 aa0.6□□□□□ -2.31
SCC2YDR180W SOM1Q05676 74 aa0.59□□□□□ -2.31
SCC2YDR180W QCR10P37299 77 aa0.59□□□□□ -2.32
SCC2YDR180W RPL33BP41056 107 aaKnown RBP0.59□□□□□ -2.32
SCC2YDR180W RPL39P04650 51 aa0.58□□□□□ -2.32
SCC2YDR180W YNL122CP53921 115 aaPredicted RBP0.58□□□□□ -2.32
SCC2YDR180W YPR117WQ06116 2489 aa0.58□□□□□ -2.32
SCC2YDR180W YBR230W-AQ3E762 66 aa0.58□□□□□ -2.32
SCC2YDR180W YHR213W-BQ8TGK1 99 aa0.58□□□□□ -2.32
SCC2YDR180W URA2P07259 2214 aaKnown RBP0.57□□□□□ -2.32
SCC2YDR180W ATP17Q06405 101 aa0.57□□□□□ -2.32
SCC2YDR180W YMR001C-AQ8TGS9 76 aa0.57□□□□□ -2.32
SCC2YDR180W COX8P04039 78 aa0.57□□□□□ -2.32
SCC2YDR180W YJL144WP47009 104 aa0.56□□□□□ -2.32
SCC2YDR180W SPG1P50088 95 aa0.56□□□□□ -2.32
SCC2YDR180W RPL37BP51402 88 aaKnown RBP0.56□□□□□ -2.32
SCC2YDR180W YHR086W-AQ3E746 53 aa0.56□□□□□ -2.32
SCC2YDR180W DDR48P18899 430 aaKnown RBP0.56□□□□□ -2.32
SCC2YDR180W YBR016WP38216 128 aa0.56□□□□□ -2.32
SCC2YDR180W RPC10P40422 70 aa0.56□□□□□ -2.32
SCC2YDR180W SPC1P46965 94 aa0.56□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 71.4 ms