RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W YDL241WQ07738 123 aa0.93□□□□□ -2.26
CDC36YDL165W YCL048W-AQ2V2Q2 79 aa0.93□□□□□ -2.26
CDC36YDL165W YLR236CA0A023PZG4 107 aa0.92□□□□□ -2.26
CDC36YDL165W RTC6O14464 93 aa0.92□□□□□ -2.26
CDC36YDL165W YSF3P0C074 85 aaPredicted RBP0.92□□□□□ -2.26
CDC36YDL165W YBR219CP38317 127 aa0.92□□□□□ -2.26
CDC36YDL165W YHR125WP38831 101 aa0.92□□□□□ -2.26
CDC36YDL165W YNL208WP40159 199 aaKnown RBP0.92□□□□□ -2.26
CDC36YDL165W MRPS12P53732 153 aa0.92□□□□□ -2.26
CDC36YDL165W YNL190WP53872 204 aa0.92□□□□□ -2.26
CDC36YDL165W YDR115WQ04598 105 aa0.92□□□□□ -2.26
CDC36YDL165W ATP17Q06405 101 aa0.92□□□□□ -2.26
CDC36YDL165W YPR013CQ12145 317 aa0.92□□□□□ -2.26
CDC36YDL165W YIL156W-BQ2V2P4 73 aa0.92□□□□□ -2.26
CDC36YDL165W SDH6Q3E785 79 aa0.92□□□□□ -2.26
CDC36YDL165W YNL042W-BQ3E7Z2 85 aa0.92□□□□□ -2.26
CDC36YDL165W YLR342W-AQ3E810 57 aa0.92□□□□□ -2.26
CDC36YDL165W YOR032W-AQ8TGS1 66 aa0.92□□□□□ -2.26
CDC36YDL165W YMR001C-AQ8TGS9 76 aa0.92□□□□□ -2.26
CDC36YDL165W RPS11AP0CX47 156 aaKnown RBP0.91□□□□□ -2.26
CDC36YDL165W RPS11BP0CX48 156 aaKnown RBP0.91□□□□□ -2.26
CDC36YDL165W YBR027CP38220 110 aa0.91□□□□□ -2.26
CDC36YDL165W YEL008WP40001 126 aa0.91□□□□□ -2.26
CDC36YDL165W YMR141CP40211 102 aa0.91□□□□□ -2.26
CDC36YDL165W YIL102CP40488 101 aa0.91□□□□□ -2.26
CDC36YDL165W IGD1P43598 195 aa0.91□□□□□ -2.26
CDC36YDL165W YNL122CP53921 115 aaPredicted RBP0.91□□□□□ -2.26
CDC36YDL165W ATP18P81450 59 aa0.91□□□□□ -2.26
CDC36YDL165W CCW12Q12127 133 aa0.91□□□□□ -2.26
CDC36YDL165W YOR034C-AQ3E735 80 aa0.91□□□□□ -2.26
CDC36YDL165W STT4P37297 1900 aa0.91□□□□□ -2.26
CDC36YDL165W YOL013W-AP0C272 63 aaPredicted RBP0.9□□□□□ -2.27
CDC36YDL165W AQY2P0CD90 149 aa0.9□□□□□ -2.27
CDC36YDL165W YLR157W-DP0CE99 70 aa0.9□□□□□ -2.27
CDC36YDL165W YEL014CP39999 101 aa0.9□□□□□ -2.27
CDC36YDL165W YJR146WP47174 117 aa0.9□□□□□ -2.27
CDC36YDL165W NCE101Q02820 53 aa0.9□□□□□ -2.27
CDC36YDL165W SGF11Q03067 99 aa0.9□□□□□ -2.27
CDC36YDL165W YPR195CQ06594 109 aa0.9□□□□□ -2.27
CDC36YDL165W PMD1P32634 1753 aa0.9□□□□□ -2.27
CDC36YDL165W FLO1P32768 1537 aa0.89□□□□□ -2.27
CDC36YDL165W YPR010C-AA5Z2X5 72 aa0.89□□□□□ -2.27
CDC36YDL165W YFR009W-AP0C5M9 85 aa0.89□□□□□ -2.27
CDC36YDL165W YDR114CQ04597 100 aa0.89□□□□□ -2.27
CDC36YDL165W ECM19Q06011 112 aa0.89□□□□□ -2.27
CDC36YDL165W YOL097W-AQ3E7Y9 61 aa0.89□□□□□ -2.27
CDC36YDL165W BEM2P39960 2167 aaKnown RBP0.89□□□□□ -2.27
CDC36YDL165W FAS1P07149 2051 aaKnown RBP0.88□□□□□ -2.27
CDC36YDL165W YGL014C-AP0C5N1 53 aa0.88□□□□□ -2.27
CDC36YDL165W YGR025WP53216 100 aa0.88□□□□□ -2.27
CDC36YDL165W LCL2Q08045 131 aa0.88□□□□□ -2.27
CDC36YDL165W YGL041C-BQ3E750 60 aa0.88□□□□□ -2.27
CDC36YDL165W CMC4Q3E7A9 73 aa0.88□□□□□ -2.27
CDC36YDL165W COX8P04039 78 aa0.87□□□□□ -2.27
CDC36YDL165W YBL039W-BP0C268 59 aa0.87□□□□□ -2.27
CDC36YDL165W YHR032W-AP0C5N6 59 aa0.87□□□□□ -2.27
CDC36YDL165W RPL33BP41056 107 aaKnown RBP0.87□□□□□ -2.27
CDC36YDL165W YJL027CP47063 138 aaPredicted RBP0.87□□□□□ -2.27
CDC36YDL165W YBR200W-AQ3E755 54 aa0.87□□□□□ -2.27
CDC36YDL165W YOR011W-AQ3E807 68 aa0.87□□□□□ -2.27
CDC36YDL165W YLL006W-AQ3E814 58 aa0.87□□□□□ -2.27
CDC36YDL165W YLR307C-AQ3E825 87 aa0.87□□□□□ -2.27
CDC36YDL165W YMR122W-AQ3E842 84 aa0.87□□□□□ -2.27
CDC36YDL165W YHR213W-BQ8TGK1 99 aa0.87□□□□□ -2.27
CDC36YDL165W YAL067W-AQ8TGK6 75 aa0.87□□□□□ -2.27
CDC36YDL165W BLM10P43583 2143 aa0.86□□□□□ -2.27
CDC36YDL165W RPL29P05747 59 aaPredicted RBP0.86□□□□□ -2.27
CDC36YDL165W SIP18P50263 79 aa0.86□□□□□ -2.27
CDC36YDL165W PMP3P87284 55 aa0.86□□□□□ -2.27
CDC36YDL165W YHR007C-AQ07074 71 aa0.86□□□□□ -2.27
CDC36YDL165W YBR201C-AQ2V2Q3 67 aa0.86□□□□□ -2.27
CDC36YDL165W YBR230W-AQ3E762 66 aa0.86□□□□□ -2.27
CDC36YDL165W YJL133C-AQ3E7A3 74 aa0.86□□□□□ -2.27
CDC36YDL165W YOL085CQ99345 113 aa0.86□□□□□ -2.27
CDC36YDL165W Q0032Q9ZZX7 96 aa0.86□□□□□ -2.27
CDC36YDL165W ACC1Q00955 2233 aaKnown RBP0.85□□□□□ -2.27
CDC36YDL165W RPL33AP05744 107 aaKnown RBP0.85□□□□□ -2.27
CDC36YDL165W FPR1P20081 114 aaKnown RBP0.85□□□□□ -2.27
CDC36YDL165W AUA1P32450 94 aa0.85□□□□□ -2.27
CDC36YDL165W VAM10Q08474 114 aa0.85□□□□□ -2.27
CDC36YDL165W YLR255CO13574 117 aa0.84□□□□□ -2.27
CDC36YDL165W YAR064WP39563 99 aa0.84□□□□□ -2.27
CDC36YDL165W YER084WP40057 128 aa0.84□□□□□ -2.27
CDC36YDL165W MVB12P42939 101 aa0.84□□□□□ -2.27
CDC36YDL165W DDR2P89113 61 aa0.84□□□□□ -2.27
CDC36YDL165W YDR210WQ03482 75 aa0.84□□□□□ -2.27
CDC36YDL165W YJL127C-BQ3E828 52 aa0.84□□□□□ -2.27
CDC36YDL165W FIG2P25653 1609 aa0.84□□□□□ -2.28
CDC36YDL165W SEN1Q00416 2231 aaKnown RBP0.84□□□□□ -2.28
CDC36YDL165W SEC16P48415 2195 aaKnown RBP0.83□□□□□ -2.28
CDC36YDL165W YIL086CP40503 102 aa0.83□□□□□ -2.28
CDC36YDL165W OLI1P61829 76 aa0.83□□□□□ -2.28
CDC36YDL165W YGR240C-AQ3E786 66 aa0.83□□□□□ -2.28
CDC36YDL165W YNL146C-AQ3E7Z1 64 aa0.83□□□□□ -2.28
CDC36YDL165W YOR394C-AQ8TGJ0 55 aa0.83□□□□□ -2.28
CDC36YDL165W URA2P07259 2214 aaKnown RBP0.83□□□□□ -2.28
CDC36YDL165W POL2P21951 2222 aaKnown RBP0.83□□□□□ -2.28
CDC36YDL165W COX7P10174 60 aa0.82□□□□□ -2.28
CDC36YDL165W RPS27AP35997 82 aaKnown RBP0.82□□□□□ -2.28
CDC36YDL165W RPS27BP38711 82 aa0.82□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 8 ms