RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W LIP1Q03579 150 aa1.61□□□□□ -2.15
MCD1YDL003W TMC1Q08422 150 aaPredicted RBP1.61□□□□□ -2.15
MCD1YDL003W SDH6Q3E785 79 aa1.61□□□□□ -2.15
MCD1YDL003W YMR105W-AQ8TGS8 64 aa1.61□□□□□ -2.15
MCD1YDL003W BLM10P43583 2143 aa1.61□□□□□ -2.15
MCD1YDL003W YFR009W-AP0C5M9 85 aa1.6□□□□□ -2.15
MCD1YDL003W YHL037CP38733 133 aa1.6□□□□□ -2.15
MCD1YDL003W VAM10Q08474 114 aa1.6□□□□□ -2.15
MCD1YDL003W CCW12Q12127 133 aa1.6□□□□□ -2.15
MCD1YDL003W YOL166W-AQ8TGJ1 51 aa1.6□□□□□ -2.15
MCD1YDL003W YOL085CQ99345 113 aa1.6□□□□□ -2.15
MCD1YDL003W YPR010C-AA5Z2X5 72 aa1.6□□□□□ -2.15
MCD1YDL003W YAR023CD6VPM8 179 aa1.6□□□□□ -2.15
MCD1YDL003W YLR157W-DP0CE99 70 aa1.6□□□□□ -2.15
MCD1YDL003W QCR10P37299 77 aa1.6□□□□□ -2.15
MCD1YDL003W COX23P38824 151 aa1.6□□□□□ -2.15
MCD1YDL003W EDC2P40023 145 aaPredicted RBP1.6□□□□□ -2.15
MCD1YDL003W MRPS8Q03799 155 aa1.6□□□□□ -2.15
MCD1YDL003W YOR011W-AQ3E807 68 aa1.6□□□□□ -2.15
MCD1YDL003W YBR219CP38317 127 aa1.59□□□□□ -2.16
MCD1YDL003W YDR010CQ12426 110 aa1.59□□□□□ -2.16
MCD1YDL003W YNL146C-AQ3E7Z1 64 aa1.58□□□□□ -2.16
MCD1YDL003W YMR122W-AQ3E842 84 aa1.58□□□□□ -2.16
MCD1YDL003W YHR213W-BQ8TGK1 99 aa1.58□□□□□ -2.16
MCD1YDL003W YMR001C-AQ8TGS9 76 aa1.58□□□□□ -2.16
MCD1YDL003W RPL29P05747 59 aaPredicted RBP1.57□□□□□ -2.16
MCD1YDL003W YCR001WP25347 104 aa1.57□□□□□ -2.16
MCD1YDL003W MVB12P42939 101 aa1.57□□□□□ -2.16
MCD1YDL003W YGL149WP53116 101 aa1.57□□□□□ -2.16
MCD1YDL003W BSC4P53841 131 aa1.57□□□□□ -2.16
MCD1YDL003W YPR013CQ12145 317 aa1.57□□□□□ -2.16
MCD1YDL003W YJL133C-AQ3E7A3 74 aa1.57□□□□□ -2.16
MCD1YDL003W BEM2P39960 2167 aaKnown RBP1.57□□□□□ -2.16
MCD1YDL003W YBL039W-BP0C268 59 aa1.57□□□□□ -2.16
MCD1YDL003W YOL013W-AP0C272 63 aaPredicted RBP1.57□□□□□ -2.16
MCD1YDL003W YGR025WP53216 100 aa1.57□□□□□ -2.16
MCD1YDL003W ATP17Q06405 101 aa1.57□□□□□ -2.16
MCD1YDL003W YDL241WQ07738 123 aa1.57□□□□□ -2.16
MCD1YDL003W YJL127C-BQ3E828 52 aa1.57□□□□□ -2.16
MCD1YDL003W AQY2P0CD90 149 aa1.56□□□□□ -2.16
MCD1YDL003W RPS11AP0CX47 156 aaKnown RBP1.56□□□□□ -2.16
MCD1YDL003W RPS11BP0CX48 156 aaKnown RBP1.56□□□□□ -2.16
MCD1YDL003W SOM1Q05676 74 aa1.56□□□□□ -2.16
MCD1YDL003W YIL156W-BQ2V2P4 73 aa1.56□□□□□ -2.16
MCD1YDL003W YNL042W-BQ3E7Z2 85 aa1.56□□□□□ -2.16
MCD1YDL003W YIL046W-AQ3E7Z4 54 aa1.56□□□□□ -2.16
MCD1YDL003W FAS1P07149 2051 aaKnown RBP1.56□□□□□ -2.16
MCD1YDL003W MRX7P53869 86 aa1.55□□□□□ -2.16
MCD1YDL003W ECM19Q06011 112 aa1.55□□□□□ -2.16
MCD1YDL003W YOL014WQ08110 124 aa1.55□□□□□ -2.16
MCD1YDL003W POL2P21951 2222 aaKnown RBP1.55□□□□□ -2.16
MCD1YDL003W ACC1Q00955 2233 aaKnown RBP1.55□□□□□ -2.16
MCD1YDL003W YBR027CP38220 110 aa1.54□□□□□ -2.16
MCD1YDL003W YNL122CP53921 115 aaPredicted RBP1.54□□□□□ -2.16
MCD1YDL003W SGF11Q03067 99 aa1.54□□□□□ -2.16
MCD1YDL003W HOR7Q05827 59 aa1.54□□□□□ -2.16
MCD1YDL003W YCL048W-AQ2V2Q2 79 aa1.54□□□□□ -2.16
MCD1YDL003W YBR230W-AQ3E762 66 aa1.54□□□□□ -2.16
MCD1YDL003W SEC16P48415 2195 aaKnown RBP1.54□□□□□ -2.16
MCD1YDL003W YHR125WP38831 101 aa1.54□□□□□ -2.16
MCD1YDL003W YDL012CQ12489 107 aa1.54□□□□□ -2.16
MCD1YDL003W YFR032C-BQ8TGU2 87 aa1.54□□□□□ -2.16
MCD1YDL003W Q0032Q9ZZX7 96 aa1.54□□□□□ -2.16
MCD1YDL003W YAR064WP39563 99 aa1.53□□□□□ -2.16
MCD1YDL003W DDR2P89113 61 aa1.53□□□□□ -2.16
MCD1YDL003W YLR307C-AQ3E825 87 aa1.53□□□□□ -2.16
MCD1YDL003W WWM1P43582 211 aaKnown RBP1.52□□□□□ -2.17
MCD1YDL003W YGR240C-AQ3E786 66 aa1.52□□□□□ -2.17
MCD1YDL003W SEN1Q00416 2231 aaKnown RBP1.52□□□□□ -2.17
MCD1YDL003W YKL097CP34245 136 aa1.52□□□□□ -2.17
MCD1YDL003W RPC10P40422 70 aa1.52□□□□□ -2.17
MCD1YDL003W BRR2P32639 2163 aaKnown RBP1.51□□□□□ -2.17
MCD1YDL003W AUA1P32450 94 aa1.51□□□□□ -2.17
MCD1YDL003W YHR007C-AQ07074 71 aa1.51□□□□□ -2.17
MCD1YDL003W LCL2Q08045 131 aa1.51□□□□□ -2.17
MCD1YDL003W YOR072WQ08486 104 aa1.51□□□□□ -2.17
MCD1YDL003W YBL008W-AQ3E821 79 aa1.51□□□□□ -2.17
MCD1YDL003W YGL014C-AP0C5N1 53 aa1.5□□□□□ -2.17
MCD1YDL003W YPL278CQ08990 100 aa1.5□□□□□ -2.17
MCD1YDL003W YBR201C-AQ2V2Q3 67 aa1.5□□□□□ -2.17
MCD1YDL003W YGL041C-BQ3E750 60 aa1.5□□□□□ -2.17
MCD1YDL003W YJL197C-AP0C5P0 93 aa1.49□□□□□ -2.17
MCD1YDL003W FYV12Q08559 129 aa1.49□□□□□ -2.17
MCD1YDL003W YER078W-AQ3E7A2 54 aa1.49□□□□□ -2.17
MCD1YDL003W YOL097W-AQ3E7Y9 61 aa1.49□□□□□ -2.17
MCD1YDL003W BPH1P25356 2167 aa1.49□□□□□ -2.17
MCD1YDL003W RTC6O14464 93 aa1.49□□□□□ -2.17
MCD1YDL003W IGD1P43598 195 aa1.49□□□□□ -2.17
MCD1YDL003W FAB1P34756 2278 aa1.48□□□□□ -2.17
MCD1YDL003W RPL33AP05744 107 aaKnown RBP1.46□□□□□ -2.18
MCD1YDL003W YEL014CP39999 101 aa1.46□□□□□ -2.18
MCD1YDL003W RPL33BP41056 107 aaKnown RBP1.46□□□□□ -2.18
MCD1YDL003W RDS3Q06835 107 aaPredicted RBP1.46□□□□□ -2.18
MCD1YDL003W TAR1Q8TGM6 124 aa1.46□□□□□ -2.18
MCD1YDL003W COX8P04039 78 aa1.46□□□□□ -2.18
MCD1YDL003W YFL067WP43537 175 aa1.45□□□□□ -2.18
MCD1YDL003W OLI1P61829 76 aa1.44□□□□□ -2.18
MCD1YDL003W YGR146C-AQ8TGT9 53 aa1.44□□□□□ -2.18
MCD1YDL003W YCR041WP37265 110 aa1.43□□□□□ -2.18
MCD1YDL003W YJR128WP47162 119 aa1.43□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms