RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB3, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB3YBR278W FKS3Q04952 1785 aa0.8□□□□□ -2.28
DPB3YBR278W APC1P53886 1748 aa0.79□□□□□ -2.28
DPB3YBR278W YDR029WQ12111 104 aa0.79□□□□□ -2.28
DPB3YBR278W SEN1Q00416 2231 aaKnown RBP0.79□□□□□ -2.28
DPB3YBR278W RSM18P40033 138 aa0.78□□□□□ -2.28
DPB3YBR278W PAU4P53427 120 aa0.78□□□□□ -2.28
DPB3YBR278W NUP192P47054 1683 aa0.78□□□□□ -2.29
DPB3YBR278W RIM15P43565 1770 aa0.78□□□□□ -2.29
DPB3YBR278W MYO1P08964 1928 aa0.77□□□□□ -2.29
DPB3YBR278W SNU13P39990 126 aaKnown RBP0.77□□□□□ -2.29
DPB3YBR278W SUS1Q6WNK7 96 aa0.77□□□□□ -2.29
DPB3YBR278W FIG2P25653 1609 aa0.77□□□□□ -2.29
DPB3YBR278W FAS2P19097 1887 aaKnown RBP0.77□□□□□ -2.29
DPB3YBR278W BRR2P32639 2163 aaKnown RBP0.77□□□□□ -2.29
DPB3YBR278W POL2P21951 2222 aaKnown RBP0.76□□□□□ -2.29
DPB3YBR278W YDR042CQ03205 200 aa0.75□□□□□ -2.29
DPB3YBR278W YNL190WP53872 204 aa0.74□□□□□ -2.29
DPB3YBR278W YDR034W-BQ6Q5X2 51 aa0.74□□□□□ -2.29
DPB3YBR278W MEC1P38111 2368 aa0.74□□□□□ -2.29
DPB3YBR278W MHF2Q3E829 80 aa0.73□□□□□ -2.29
DPB3YBR278W YCR075W-AQ3E830 75 aa0.73□□□□□ -2.29
DPB3YBR278W RPC10P40422 70 aa0.72□□□□□ -2.29
DPB3YBR278W BLM10P43583 2143 aa0.71□□□□□ -2.3
DPB3YBR278W IRA1P18963 3092 aa0.71□□□□□ -2.3
DPB3YBR278W IRA2P19158 3079 aa0.71□□□□□ -2.3
DPB3YBR278W YCL001W-BQ96VH2 84 aa0.71□□□□□ -2.3
DPB3YBR278W FLO1P32768 1537 aa0.7□□□□□ -2.3
DPB3YBR278W YNL198CP40166 100 aa0.7□□□□□ -2.3
DPB3YBR278W BSC4P53841 131 aa0.7□□□□□ -2.3
DPB3YBR278W YNL042W-BQ3E7Z2 85 aa0.7□□□□□ -2.3
DPB3YBR278W Q0032Q9ZZX7 96 aa0.7□□□□□ -2.3
DPB3YBR278W NHP2P32495 156 aaPredicted RBP0.69□□□□□ -2.3
DPB3YBR278W HKR1P41809 1802 aa0.68□□□□□ -2.3
DPB3YBR278W CSF1Q12150 2958 aa0.68□□□□□ -2.3
DPB3YBR278W PMD1P32634 1753 aa0.68□□□□□ -2.3
DPB3YBR278W UTP10P42945 1769 aaKnown RBP0.68□□□□□ -2.3
DPB3YBR278W ECM12O13529 151 aa0.67□□□□□ -2.3
DPB3YBR278W COX7P10174 60 aa0.67□□□□□ -2.3
DPB3YBR278W RPL38P49167 78 aaKnown RBP0.67□□□□□ -2.3
DPB3YBR278W YMR082CQ04276 118 aa0.67□□□□□ -2.3
DPB3YBR278W YBR201C-AQ2V2Q3 67 aa0.66□□□□□ -2.3
DPB3YBR278W PDX3P38075 228 aaKnown RBP0.65□□□□□ -2.31
DPB3YBR278W SCP1Q08873 200 aa0.64□□□□□ -2.31
DPB3YBR278W TRA1P38811 3744 aa0.63□□□□□ -2.31
DPB3YBR278W YJR107C-AP0CT86 78 aa0.63□□□□□ -2.31
DPB3YBR278W YGL194C-AQ2V2P6 80 aa0.63□□□□□ -2.31
DPB3YBR278W ECM29P38737 1868 aa0.63□□□□□ -2.31
DPB3YBR278W YHR214C-DP0CX93 97 aa0.62□□□□□ -2.31
DPB3YBR278W YDR524C-BQ3E6R4 66 aa0.61□□□□□ -2.31
DPB3YBR278W YMR122W-AQ3E842 84 aa0.61□□□□□ -2.31
DPB3YBR278W MOT1P32333 1867 aa0.61□□□□□ -2.31
DPB3YBR278W FPR2P32472 135 aa0.6□□□□□ -2.31
DPB3YBR278W TOM6P33448 61 aa0.6□□□□□ -2.31
DPB3YBR278W MDN1Q12019 4910 aaKnown RBP0.59□□□□□ -2.31
DPB3YBR278W YAL065CO13511 128 aa0.59□□□□□ -2.31
DPB3YBR278W YFR009W-AP0C5M9 85 aa0.59□□□□□ -2.31
DPB3YBR278W PAU23Q07987 124 aa0.59□□□□□ -2.31
DPB3YBR278W PAU17Q12370 124 aa0.59□□□□□ -2.31
DPB3YBR278W YBR016WP38216 128 aa0.58□□□□□ -2.32
DPB3YBR278W ATX1P38636 73 aa0.58□□□□□ -2.32
DPB3YBR278W YMR175W-AQ3E766 64 aa0.58□□□□□ -2.32
DPB3YBR278W DYN1P36022 4092 aa0.58□□□□□ -2.32
DPB3YBR278W ATP18P81450 59 aa0.56□□□□□ -2.32
DPB3YBR278W YOR343CQ12484 108 aa0.55□□□□□ -2.32
DPB3YBR278W SDH6Q3E785 79 aa0.55□□□□□ -2.32
DPB3YBR278W YIL046W-AQ3E7Z4 54 aa0.55□□□□□ -2.32
DPB3YBR278W YIL134C-AQ45U18 67 aa0.55□□□□□ -2.32
DPB3YBR278W YBR056W-AI2HB52 66 aa0.54□□□□□ -2.32
DPB3YBR278W NOP10Q6Q547 58 aaPredicted RBP0.53□□□□□ -2.32
DPB3YBR278W MLP1Q02455 1875 aaKnown RBP0.52□□□□□ -2.33
DPB3YBR278W CWP2P43497 92 aa0.5□□□□□ -2.33
DPB3YBR278W STT4P37297 1900 aa0.49□□□□□ -2.33
DPB3YBR278W YIL156W-BQ2V2P4 73 aa0.49□□□□□ -2.33
DPB3YBR278W YOR105WQ08504 108 aa0.48□□□□□ -2.33
DPB3YBR278W POC4Q12245 148 aaPredicted RBP0.48□□□□□ -2.33
DPB3YBR278W YCR085WP25650 117 aa0.47□□□□□ -2.33
DPB3YBR278W YKL068W-AQ3E826 78 aa0.47□□□□□ -2.33
DPB3YBR278W SGF11Q03067 99 aa0.46□□□□□ -2.34
DPB3YBR278W YPR145C-AQ2V2P0 78 aa0.46□□□□□ -2.34
DPB3YBR278W YPR108W-AQ3E7B3 70 aa0.46□□□□□ -2.34
DPB3YBR278W YOL097W-AQ3E7Y9 61 aa0.44□□□□□ -2.34
DPB3YBR278W Q0297Q9ZZV8 51 aa0.43□□□□□ -2.34
DPB3YBR278W BPH1P25356 2167 aa0.43□□□□□ -2.34
DPB3YBR278W YKL065W-AQ2V2P2 73 aa0.42□□□□□ -2.34
DPB3YBR278W EDC1P53080 175 aaPredicted RBP0.41□□□□□ -2.34
DPB3YBR278W YOR314WQ12506 109 aa0.41□□□□□ -2.34
DPB3YBR278W YBR032WP38223 100 aa0.4□□□□□ -2.35
DPB3YBR278W YDR381C-AQ3E6R5 114 aa0.4□□□□□ -2.35
DPB3YBR278W YGR035W-AQ45U48 73 aa0.4□□□□□ -2.35
DPB3YBR278W YOR032W-AQ8TGS1 66 aa0.39□□□□□ -2.35
DPB3YBR278W YDL022C-AP0C5L6 82 aa0.37□□□□□ -2.35
DPB3YBR278W YGR025WP53216 100 aa0.36□□□□□ -2.35
DPB3YBR278W YFR010W-AP0C5N0 62 aa0.34□□□□□ -2.36
DPB3YBR278W RPS27AP35997 82 aaKnown RBP0.33□□□□□ -2.36
DPB3YBR278W RPS27BP38711 82 aa0.33□□□□□ -2.36
DPB3YBR278W YGR121W-AQ3E816 71 aa0.33□□□□□ -2.36
DPB3YBR278W YCR108CQ3E819 63 aa0.33□□□□□ -2.36
DPB3YBR278W QCR9P22289 66 aa0.32□□□□□ -2.36
DPB3YBR278W SWM2P40342 146 aa0.32□□□□□ -2.36
DPB3YBR278W YBL044WP38194 122 aa0.31□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms