RNA–Protein interactions for RNA: YBR275C

RIF1, Transcript of Protein that binds to the Rap1p C-terminus, yeastyeast

Gene RIF1, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIF1YBR275C TY2B-OR2Q12501 1770 aa2.02□□□□□ -2.09
RIF1YBR275C YNL208WP40159 199 aaKnown RBP2.02□□□□□ -2.09
RIF1YBR275C KRE9P39005 276 aa2.02□□□□□ -2.09
RIF1YBR275C TOM6P33448 61 aa2.01□□□□□ -2.09
RIF1YBR275C YPR153WQ06537 140 aa2.01□□□□□ -2.09
RIF1YBR275C YHR213W-BQ8TGK1 99 aa2.01□□□□□ -2.09
RIF1YBR275C YBR230W-AQ3E762 66 aa2.01□□□□□ -2.09
RIF1YBR275C YCR025CP25352 136 aa2□□□□□ -2.09
RIF1YBR275C YAR064WP39563 99 aa2□□□□□ -2.09
RIF1YBR275C YDR381C-AQ3E6R5 114 aa2□□□□□ -2.09
RIF1YBR275C YHR073W-AP0C5N7 58 aa1.99□□□□□ -2.09
RIF1YBR275C RSM19P53733 91 aaPredicted RBP1.99□□□□□ -2.09
RIF1YBR275C APC1P53886 1748 aa1.99□□□□□ -2.09
RIF1YBR275C RPL29P05747 59 aaPredicted RBP1.99□□□□□ -2.09
RIF1YBR275C MLP1Q02455 1875 aaKnown RBP1.99□□□□□ -2.09
RIF1YBR275C YBR298C-AQ8TGK4 73 aa1.99□□□□□ -2.09
RIF1YBR275C TY1B-DR4Q07793 1604 aa1.99□□□□□ -2.09
RIF1YBR275C RRP5Q05022 1729 aaKnown RBP1.99□□□□□ -2.09
RIF1YBR275C YIL002W-AQ3E7Z5 69 aa1.98□□□□□ -2.09
RIF1YBR275C YDR034W-BQ6Q5X2 51 aa1.98□□□□□ -2.09
RIF1YBR275C YMR122CQ03879 124 aa1.98□□□□□ -2.09
RIF1YBR275C YIL177CP40434 1758 aa1.98□□□□□ -2.09
RIF1YBR275C YJL225CP40889 1758 aa1.98□□□□□ -2.09
RIF1YBR275C YBR027CP38220 110 aa1.98□□□□□ -2.09
RIF1YBR275C YBR090CP38253 122 aa1.98□□□□□ -2.09
RIF1YBR275C COX14P39103 70 aa1.98□□□□□ -2.09
RIF1YBR275C NUP42P49686 430 aaKnown RBP1.98□□□□□ -2.09
RIF1YBR275C YGL193CP53097 103 aa1.97□□□□□ -2.09
RIF1YBR275C YIL102C-AQ2V2P5 75 aa1.97□□□□□ -2.09
RIF1YBR275C UTP10P42945 1769 aaKnown RBP1.97□□□□□ -2.09
RIF1YBR275C TMA7Q3E764 64 aaKnown RBP1.96□□□□□ -2.09
RIF1YBR275C YOR394C-AQ8TGJ0 55 aa1.96□□□□□ -2.09
RIF1YBR275C HHY1P39982 102 aa1.96□□□□□ -2.1
RIF1YBR275C AUA1P32450 94 aa1.96□□□□□ -2.1
RIF1YBR275C VMA9Q3E7B6 73 aa1.95□□□□□ -2.1
RIF1YBR275C CDC39P25655 2108 aaKnown RBP1.95□□□□□ -2.1
RIF1YBR275C SNF2P22082 1703 aa1.95□□□□□ -2.1
RIF1YBR275C YHR125WP38831 101 aa1.95□□□□□ -2.1
RIF1YBR275C RPO21P04050 1733 aaKnown RBP1.94□□□□□ -2.1
RIF1YBR275C COX19Q3E731 98 aa1.93□□□□□ -2.1
RIF1YBR275C ECM29P38737 1868 aa1.93□□□□□ -2.1
RIF1YBR275C YLR255CO13574 117 aa1.93□□□□□ -2.1
RIF1YBR275C YLR157W-EP0CF00 54 aa1.92□□□□□ -2.1
RIF1YBR275C COX23P38824 151 aa1.92□□□□□ -2.1
RIF1YBR275C YIL014C-AQ02598 104 aa1.92□□□□□ -2.1
RIF1YBR275C YRF1-3P0CX14 1859 aa1.92□□□□□ -2.1
RIF1YBR275C YRF1-7P0CX15 1859 aa1.92□□□□□ -2.1
RIF1YBR275C YRF1-6P53819 1859 aa1.92□□□□□ -2.1
RIF1YBR275C YLR162WQ06235 118 aa1.92□□□□□ -2.1
RIF1YBR275C YBR072C-AQ3E794 53 aa1.91□□□□□ -2.1
RIF1YBR275C YPL038W-AQ3E7B4 63 aa1.91□□□□□ -2.1
RIF1YBR275C MGR2Q02889 113 aa1.91□□□□□ -2.1
RIF1YBR275C TY4B-JP47024 1803 aa1.9□□□□□ -2.1
RIF1YBR275C YOR381W-AQ3E804 55 aa1.9□□□□□ -2.1
RIF1YBR275C YOR316C-AQ3E806 69 aa1.9□□□□□ -2.11
RIF1YBR275C YDR278CQ05612 105 aa1.9□□□□□ -2.11
RIF1YBR275C UTP20P35194 2493 aaKnown RBP1.9□□□□□ -2.11
RIF1YBR275C TY4B-HP0C2J7 1802 aa1.89□□□□□ -2.11
RIF1YBR275C RIM15P43565 1770 aa1.89□□□□□ -2.11
RIF1YBR275C RPA12P32529 125 aaKnown RBP1.89□□□□□ -2.11
RIF1YBR275C MYO1P08964 1928 aa1.89□□□□□ -2.11
RIF1YBR275C SOM1Q05676 74 aa1.88□□□□□ -2.11
RIF1YBR275C RIF1P29539 1916 aa1.88□□□□□ -2.11
RIF1YBR275C YKL023C-AQ2V2P3 75 aa1.88□□□□□ -2.11
RIF1YBR275C YAL065CO13511 128 aa1.87□□□□□ -2.11
RIF1YBR275C YNL198CP40166 100 aa1.87□□□□□ -2.11
RIF1YBR275C YBR016WP38216 128 aa1.87□□□□□ -2.11
RIF1YBR275C YER188C-AP0C0V2 99 aa1.87□□□□□ -2.11
RIF1YBR275C YBL008W-AQ3E821 79 aa1.87□□□□□ -2.11
RIF1YBR275C YHR032W-AP0C5N6 59 aa1.86□□□□□ -2.11
RIF1YBR275C YDL012CQ12489 107 aa1.85□□□□□ -2.11
RIF1YBR275C FAS2P19097 1887 aaKnown RBP1.85□□□□□ -2.11
RIF1YBR275C YGR146C-AQ8TGT9 53 aa1.85□□□□□ -2.11
RIF1YBR275C YBR056W-AI2HB52 66 aa1.83□□□□□ -2.12
RIF1YBR275C FIG2P25653 1609 aa1.81□□□□□ -2.12
RIF1YBR275C YBR255C-AQ3E776 120 aa1.81□□□□□ -2.12
RIF1YBR275C YNR077CP53758 84 aa1.8□□□□□ -2.12
RIF1YBR275C YLL066W-BQ8TGJ7 56 aa1.8□□□□□ -2.12
RIF1YBR275C YDR115WQ04598 105 aa1.79□□□□□ -2.12
RIF1YBR275C FKS3Q04952 1785 aa1.79□□□□□ -2.12
RIF1YBR275C YDR182W-AQ3E796 67 aa1.79□□□□□ -2.12
RIF1YBR275C BNI1P41832 1953 aa1.78□□□□□ -2.12
RIF1YBR275C YML122CQ03207 126 aa1.78□□□□□ -2.12
RIF1YBR275C UBR1P19812 1950 aa1.77□□□□□ -2.13
RIF1YBR275C YOL164W-AQ3E7A5 60 aa1.77□□□□□ -2.13
RIF1YBR275C GSC2P40989 1895 aa1.77□□□□□ -2.13
RIF1YBR275C QCR10P37299 77 aa1.77□□□□□ -2.13
RIF1YBR275C YJR128WP47162 119 aa1.77□□□□□ -2.13
RIF1YBR275C EDC1P53080 175 aaPredicted RBP1.76□□□□□ -2.13
RIF1YBR275C FKS1P38631 1876 aaKnown RBP1.76□□□□□ -2.13
RIF1YBR275C YMR230W-AQ3E7B5 62 aa1.76□□□□□ -2.13
RIF1YBR275C SLH1P53327 1967 aaKnown RBP1.76□□□□□ -2.13
RIF1YBR275C YDR246W-AQ3E763 66 aa1.75□□□□□ -2.13
RIF1YBR275C TY1B-DR1Q03855 1755 aa1.75□□□□□ -2.13
RIF1YBR275C YDR210WQ03482 75 aa1.74□□□□□ -2.13
RIF1YBR275C FAS1P07149 2051 aaKnown RBP1.74□□□□□ -2.13
RIF1YBR275C YOL013W-AP0C272 63 aaPredicted RBP1.74□□□□□ -2.13
RIF1YBR275C TDA8Q6B2U8 126 aa1.73□□□□□ -2.13
RIF1YBR275C TY1B-DR5P0C2I2 1755 aa1.73□□□□□ -2.13
RIF1YBR275C TY1B-DR6P0C2I3 1755 aa1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 67 ms