RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C SPC1P46965 94 aa1.71□□□□□ -2.13
NPL4YBR170C MRX7P53869 86 aa1.71□□□□□ -2.14
NPL4YBR170C TOM6P33448 61 aa1.7□□□□□ -2.14
NPL4YBR170C YIL102C-AQ2V2P5 75 aa1.7□□□□□ -2.14
NPL4YBR170C YMR175W-AQ3E766 64 aa1.7□□□□□ -2.14
NPL4YBR170C YER188C-AP0C0V2 99 aa1.69□□□□□ -2.14
NPL4YBR170C YBR292CP38357 123 aa1.69□□□□□ -2.14
NPL4YBR170C YFL041W-AQ3E817 63 aa1.69□□□□□ -2.14
NPL4YBR170C ICY1Q04329 127 aa1.68□□□□□ -2.14
NPL4YBR170C POL2P21951 2222 aaKnown RBP1.67□□□□□ -2.14
NPL4YBR170C FKS3Q04952 1785 aa1.67□□□□□ -2.14
NPL4YBR170C MPC2P38857 129 aa1.67□□□□□ -2.14
NPL4YBR170C AUA1P32450 94 aa1.66□□□□□ -2.14
NPL4YBR170C NHP2P32495 156 aaPredicted RBP1.66□□□□□ -2.14
NPL4YBR170C COX19Q3E731 98 aa1.66□□□□□ -2.14
NPL4YBR170C YKL018C-AQ3E7A7 99 aa1.66□□□□□ -2.14
NPL4YBR170C YLR307C-AQ3E825 87 aa1.66□□□□□ -2.14
NPL4YBR170C MHF2Q3E829 80 aa1.66□□□□□ -2.14
NPL4YBR170C PAU20Q08322 120 aa1.66□□□□□ -2.14
NPL4YBR170C MOT1P32333 1867 aa1.65□□□□□ -2.15
NPL4YBR170C YLR157W-EP0CF00 54 aa1.65□□□□□ -2.15
NPL4YBR170C YKL023C-AQ2V2P3 75 aa1.65□□□□□ -2.15
NPL4YBR170C YDR381C-AQ3E6R5 114 aa1.65□□□□□ -2.15
NPL4YBR170C PAU1P0CE88 120 aa1.64□□□□□ -2.15
NPL4YBR170C PAU14P0CE89 120 aa1.64□□□□□ -2.15
NPL4YBR170C PAU8P0CE92 120 aa1.64□□□□□ -2.15
NPL4YBR170C PAU11P0CE93 120 aa1.64□□□□□ -2.15
NPL4YBR170C PAU13P38725 120 aa1.64□□□□□ -2.15
NPL4YBR170C AIM19P40502 157 aa1.64□□□□□ -2.15
NPL4YBR170C PAU10Q03050 120 aa1.64□□□□□ -2.15
NPL4YBR170C YOR105WQ08504 108 aa1.64□□□□□ -2.15
NPL4YBR170C PAU9Q3E770 120 aa1.64□□□□□ -2.15
NPL4YBR170C ECM29P38737 1868 aa1.63□□□□□ -2.15
NPL4YBR170C RIM15P43565 1770 aa1.62□□□□□ -2.15
NPL4YBR170C FLO1P32768 1537 aa1.62□□□□□ -2.15
NPL4YBR170C RPS11AP0CX47 156 aaKnown RBP1.62□□□□□ -2.15
NPL4YBR170C RPS11BP0CX48 156 aaKnown RBP1.62□□□□□ -2.15
NPL4YBR170C PAU4P53427 120 aa1.62□□□□□ -2.15
NPL4YBR170C YHR214C-DP0CX93 97 aa1.61□□□□□ -2.15
NPL4YBR170C YHR173CP38864 112 aa1.61□□□□□ -2.15
NPL4YBR170C FIG2P25653 1609 aa1.61□□□□□ -2.15
NPL4YBR170C YBR072C-AQ3E794 53 aa1.6□□□□□ -2.15
NPL4YBR170C HKR1P41809 1802 aa1.6□□□□□ -2.15
NPL4YBR170C TIM12P32830 109 aa1.6□□□□□ -2.15
NPL4YBR170C YOR343CQ12484 108 aa1.6□□□□□ -2.15
NPL4YBR170C YAL065CO13511 128 aa1.59□□□□□ -2.16
NPL4YBR170C FPR2P32472 135 aa1.59□□□□□ -2.16
NPL4YBR170C YSY6P38374 65 aa1.58□□□□□ -2.16
NPL4YBR170C YOR314WQ12506 109 aa1.58□□□□□ -2.16
NPL4YBR170C COX9P07255 59 aa1.57□□□□□ -2.16
NPL4YBR170C SPI1P40092 148 aa1.57□□□□□ -2.16
NPL4YBR170C YDR246W-AQ3E763 66 aa1.57□□□□□ -2.16
NPL4YBR170C YGR121W-AQ3E816 71 aa1.57□□□□□ -2.16
NPL4YBR170C PMD1P32634 1753 aa1.57□□□□□ -2.16
NPL4YBR170C YLR146W-AQ2V2P1 62 aa1.56□□□□□ -2.16
NPL4YBR170C YKL065W-AQ2V2P2 73 aa1.56□□□□□ -2.16
NPL4YBR170C QCR9P22289 66 aa1.55□□□□□ -2.16
NPL4YBR170C BSC4P53841 131 aa1.55□□□□□ -2.16
NPL4YBR170C ERI1P62651 68 aaKnown RBP1.55□□□□□ -2.16
NPL4YBR170C YDR010CQ12426 110 aa1.54□□□□□ -2.16
NPL4YBR170C YGR035W-AQ45U48 73 aa1.54□□□□□ -2.16
NPL4YBR170C STT4P37297 1900 aa1.54□□□□□ -2.16
NPL4YBR170C COA2Q3E823 68 aa1.52□□□□□ -2.17
NPL4YBR170C YDR182W-AQ3E796 67 aa1.51□□□□□ -2.17
NPL4YBR170C BLM10P43583 2143 aa1.5□□□□□ -2.17
NPL4YBR170C PAU7P39545 55 aa1.49□□□□□ -2.17
NPL4YBR170C EDC1P53080 175 aaPredicted RBP1.49□□□□□ -2.17
NPL4YBR170C YIL156W-BQ2V2P4 73 aa1.49□□□□□ -2.17
NPL4YBR170C YOR192C-CQ3E736 78 aa1.49□□□□□ -2.17
NPL4YBR170C YNL042W-BQ3E7Z2 85 aa1.49□□□□□ -2.17
NPL4YBR170C NOP10Q6Q547 58 aaPredicted RBP1.48□□□□□ -2.17
NPL4YBR170C YOL166W-AQ8TGJ1 51 aa1.48□□□□□ -2.17
NPL4YBR170C RPS30AP0CX33 63 aaKnown RBP1.47□□□□□ -2.17
NPL4YBR170C RPS30BP0CX34 63 aaKnown RBP1.47□□□□□ -2.17
NPL4YBR170C YOL164W-AQ3E7A5 60 aa1.47□□□□□ -2.17
NPL4YBR170C YDL022C-AP0C5L6 82 aa1.46□□□□□ -2.18
NPL4YBR170C YPR108W-AQ3E7B3 70 aa1.46□□□□□ -2.18
NPL4YBR170C YOR032W-AQ8TGS1 66 aa1.46□□□□□ -2.18
NPL4YBR170C Q0032Q9ZZX7 96 aa1.46□□□□□ -2.18
NPL4YBR170C PRP8P33334 2413 aaKnown RBP1.44□□□□□ -2.18
NPL4YBR170C RPC10P40422 70 aa1.44□□□□□ -2.18
NPL4YBR170C YBR201C-AQ2V2Q3 67 aa1.44□□□□□ -2.18
NPL4YBR170C HUB1Q6Q546 73 aa1.43□□□□□ -2.18
NPL4YBR170C YNL190WP53872 204 aa1.43□□□□□ -2.18
NPL4YBR170C NCE101Q02820 53 aa1.43□□□□□ -2.18
NPL4YBR170C ATP17Q06405 101 aa1.43□□□□□ -2.18
NPL4YBR170C YGL258W-AQ3E740 77 aa1.41□□□□□ -2.18
NPL4YBR170C YMR122W-AQ3E842 84 aa1.41□□□□□ -2.18
NPL4YBR170C TOS6P48560 102 aa1.4□□□□□ -2.18
NPL4YBR170C TOM7P53507 60 aa1.4□□□□□ -2.18
NPL4YBR170C TOM1Q03280 3268 aa1.4□□□□□ -2.19
NPL4YBR170C COX7P10174 60 aa1.4□□□□□ -2.19
NPL4YBR170C YJR107C-AP0CT86 78 aa1.39□□□□□ -2.19
NPL4YBR170C SGF11Q03067 99 aa1.38□□□□□ -2.19
NPL4YBR170C YMR001C-AQ8TGS9 76 aa1.38□□□□□ -2.19
NPL4YBR170C YLR157W-DP0CE99 70 aa1.37□□□□□ -2.19
NPL4YBR170C RPL38P49167 78 aaKnown RBP1.37□□□□□ -2.19
NPL4YBR170C ATP18P81450 59 aa1.37□□□□□ -2.19
NPL4YBR170C SDH6Q3E785 79 aa1.37□□□□□ -2.19
NPL4YBR170C YLR342W-AQ3E810 57 aa1.37□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms