RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 C3orf20Q8ND61 904 aa6.87□□□□□ -1.31
RTTN-215ENST00000639487 ADAMTS19Q8TE59 1207 aa6.87□□□□□ -1.31
RTTN-215ENST00000639487 ERCC4Q92889 916 aaPredicted RBP6.87□□□□□ -1.31
RTTN-215ENST00000639487 RANBP9Q96S59 729 aa6.87□□□□□ -1.31
RTTN-215ENST00000639487 CXorf56Q9H5V9 222 aa6.87□□□□□ -1.31
RTTN-215ENST00000639487 ZNF576Q9H609 170 aa6.87□□□□□ -1.31
RTTN-215ENST00000639487 ERVMER34-1Q9H9K5 563 aa6.87□□□□□ -1.31
RTTN-215ENST00000639487 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.87□□□□□ -1.31
RTTN-215ENST00000639487 SEMA5BQ9P283 1151 aa6.87□□□□□ -1.31
RTTN-215ENST00000639487 PCDHGA5Q9Y5G8 931 aa6.87□□□□□ -1.31
RTTN-215ENST00000639487 INSL5Q9Y5Q6 135 aa6.87□□□□□ -1.31
RTTN-215ENST00000639487 PSMD11O00231 422 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 B4GALT3O60512 393 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 KCNJ13O60928 360 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 CALB1P05937 261 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 SRFP11831 508 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 CSRP3P50461 194 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 CLCN3P51790 818 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 DEFB103AP81534 67 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 MRPS5P82675 430 aaKnown RBP6.86□□□□□ -1.31
RTTN-215ENST00000639487 PAFAH1B3Q15102 231 aaKnown RBP6.86□□□□□ -1.31
RTTN-215ENST00000639487 ARHGAP29Q52LW3 1261 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 TJAP1Q5JTD0 557 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 C16orf87Q6PH81 154 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 OLFML1Q6UWY5 402 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.86□□□□□ -1.31
RTTN-215ENST00000639487 CATSPER4Q7RTX7 472 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 SETD3Q86TU7 594 aaPredicted RBP6.86□□□□□ -1.31
RTTN-215ENST00000639487 PMM1Q92871 262 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 HPS3Q969F9 1004 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 CLIC6Q96NY7 704 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 CPEB1Q9BZB8 566 aaKnown RBP6.86□□□□□ -1.31
RTTN-215ENST00000639487 TASP1Q9H6P5 420 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 EIF2B3Q9NR50 452 aaKnown RBP6.86□□□□□ -1.31
RTTN-215ENST00000639487 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.86□□□□□ -1.31
RTTN-215ENST00000639487 RNF14Q9UBS8 474 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 CDH7Q9ULB5 785 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 PCDHB5Q9Y5E4 795 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 PCDHGC5Q9Y5F6 944 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 SIGLEC16A6NMB1 481 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 FGF10O15520 208 aaPredicted RBP6.86□□□□□ -1.31
RTTN-215ENST00000639487 PSTPIP1O43586 416 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 CISD3P0C7P0 127 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 MSL3P1P0C860 447 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 BDNFP23560 247 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 SOX5P35711 763 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 KCNA1Q09470 495 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 CYP4V2Q6ZWL3 525 aaPredicted RBP6.86□□□□□ -1.31
RTTN-215ENST00000639487 USP30Q70CQ3 517 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 CCDC105Q8IYK2 499 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 KLHL23Q8NBE8 558 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 EDAQ92838 391 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 TMEM176AQ96HP8 235 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 ACE2Q9BYF1 805 aaPredicted RBP6.86□□□□□ -1.31
RTTN-215ENST00000639487 EPC1Q9H2F5 836 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 MRPL17Q9NRX2 175 aaKnown RBP6.86□□□□□ -1.31
RTTN-215ENST00000639487 CALCOCO1Q9P1Z2 691 aa6.86□□□□□ -1.31
RTTN-215ENST00000639487 SIN3BO75182 1162 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 SERPING1P05155 500 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 NDST2P52849 883 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 DCDC1P59894 354 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 CETN1Q12798 172 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 TMEM196Q5HYL7 178 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 EFHC1Q5JVL4 640 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 SWT1Q5T5J6 900 aaKnown RBP6.85□□□□□ -1.31
RTTN-215ENST00000639487 PDPK2PQ6A1A2 396 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 USP49Q70CQ1 688 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 OTOP3Q7RTS5 596 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 TRMT11Q7Z4G4 463 aaKnown RBP6.85□□□□□ -1.31
RTTN-215ENST00000639487 NLRP14Q86W24 1093 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 METTL23Q86XA0 190 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 MAB21L3Q8N8X9 362 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 PHC3Q8NDX5 983 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 DENND6BQ8NEG7 585 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 NELFBQ8WX92 580 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 RFFLQ8WZ73 363 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 SPOCK3Q9BQ16 436 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 INTS2Q9H0H0 1204 aaKnown RBP6.85□□□□□ -1.31
RTTN-215ENST00000639487 MRPL44Q9H9J2 332 aaKnown RBP6.85□□□□□ -1.31
RTTN-215ENST00000639487 APOBEC3GQ9HC16 384 aaKnown RBP6.85□□□□□ -1.31
RTTN-215ENST00000639487 DMAP1Q9NPF5 467 aaPredicted RBP6.85□□□□□ -1.31
RTTN-215ENST00000639487 MAGEC2Q9UBF1 373 aaPredicted RBP6.85□□□□□ -1.31
RTTN-215ENST00000639487 FZD4Q9ULV1 537 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 CPAMD8Q8IZJ3 1885 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 NUP205Q92621 2012 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 DOCK6Q96HP0 2047 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 HACD1B0YJ81 288 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 KRIT1O00522 736 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 RECKO95980 971 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 PTPN2P17706 415 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 CHRNB2P17787 502 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 KIF11P52732 1056 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 COPB1P53618 953 aaKnown RBP6.85□□□□□ -1.31
RTTN-215ENST00000639487 PEX3P56589 373 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 NOMO3P69849 1222 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 PKP1Q13835 747 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 LZTR1Q8N653 840 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 CCDC150Q8NCX0 1101 aa6.85□□□□□ -1.31
RTTN-215ENST00000639487 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.85□□□□□ -1.31
RTTN-215ENST00000639487 BAHD1Q8TBE0 780 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms