RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 HEATR6Q6AI08 1181 aaKnown RBP12.18□□□□□ -0.46
LINC00538-201ENST00000626109 LRRC8DQ7L1W4 858 aa12.18□□□□□ -0.46
LINC00538-201ENST00000626109 TBC1D21Q8IYX1 336 aa12.18□□□□□ -0.46
LINC00538-201ENST00000626109 SUN5Q8TC36 379 aa12.18□□□□□ -0.46
LINC00538-201ENST00000626109 ZNF606Q8WXB4 792 aa12.18□□□□□ -0.46
LINC00538-201ENST00000626109 KCNN1Q92952 543 aa12.18□□□□□ -0.46
LINC00538-201ENST00000626109 HIC2Q96JB3 615 aa12.18□□□□□ -0.46
LINC00538-201ENST00000626109 PRMT7Q9NVM4 692 aaPredicted RBP12.18□□□□□ -0.46
LINC00538-201ENST00000626109 SALL4Q9UJQ4 1053 aa12.18□□□□□ -0.46
LINC00538-201ENST00000626109 PCDHB3Q9Y5E6 796 aa12.18□□□□□ -0.46
LINC00538-201ENST00000626109 ATP8B3O60423 1300 aa12.18□□□□□ -0.46
LINC00538-201ENST00000626109 AGPSO00116 658 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 SLC16A3O15427 465 aaKnown RBP12.17□□□□□ -0.46
LINC00538-201ENST00000626109 ERLIN2O94905 339 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 PRKCBP05771 671 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 MX2P20592 715 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 EIF1AXP47813 144 aaKnown RBP12.17□□□□□ -0.46
LINC00538-201ENST00000626109 MBTD1Q05BQ5 628 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 PCBP1Q15365 356 aaKnown RBP eCLIP12.17□□□□□ -0.46
LINC00538-201ENST00000626109 EXOC3L4Q17RC7 722 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 WSCD2Q2TBF2 565 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 LRRC31Q6UY01 552 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 PACS1Q6VY07 963 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 ARHGEF18Q6ZSZ5 1173 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 EPM2AIP1Q7L775 607 aaPredicted RBP12.17□□□□□ -0.46
LINC00538-201ENST00000626109 HDAC2Q92769 488 aaKnown RBP12.17□□□□□ -0.46
LINC00538-201ENST00000626109 ALKBH8Q96BT7 664 aaKnown RBP12.17□□□□□ -0.46
LINC00538-201ENST00000626109 PBKQ96KB5 322 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 CNDP2Q96KP4 475 aaKnown RBP12.17□□□□□ -0.46
LINC00538-201ENST00000626109 GDAP1L1Q96MZ0 367 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 ACCSQ96QU6 501 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 PSMB7Q99436 277 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 TBX20Q9UMR3 447 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 EXOC7Q9UPT5 735 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 H0YC42 278 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 M0QX08 132 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 SART1O43290 800 aaKnown RBP12.17□□□□□ -0.46
LINC00538-201ENST00000626109 NCK2O43639 380 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 SHOX2O60902 331 aaPredicted RBP12.17□□□□□ -0.46
LINC00538-201ENST00000626109 CYP1A2P05177 515 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 HADHAP40939 763 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 KCNC4Q03721 635 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 ZBTB17Q13105 803 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 GBX1Q14549 363 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 SLC9A5Q14940 896 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 RPS6KA1Q15418 735 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 BMT2Q1RMZ1 405 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 ZER1Q7Z7L7 766 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 MYLK4Q86YV6 388 aaPredicted RBP12.17□□□□□ -0.46
LINC00538-201ENST00000626109 MAP4K3Q8IVH8 894 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 GSPT2Q8IYD1 628 aaKnown RBP12.17□□□□□ -0.46
LINC00538-201ENST00000626109 SYCP3Q8IZU3 236 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 LRRC43Q8N309 656 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 EIF1ADQ8N9N8 165 aaKnown RBP12.17□□□□□ -0.46
LINC00538-201ENST00000626109 USP38Q8NB14 1042 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 HDAC7Q8WUI4 952 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 BICD1Q96G01 975 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 SH3GL2Q99962 352 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 STRA6Q9BX79 667 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 LMAN2LQ9H0V9 348 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 GANQ9H2C0 597 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 RASSF4Q9H2L5 321 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 TMEM206Q9H813 350 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 MINDY3Q9H8M7 445 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 TCF7L2Q9NQB0 619 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 GDF3Q9NR23 364 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 MAN1C1Q9NR34 630 aa12.17□□□□□ -0.46
LINC00538-201ENST00000626109 RBM12Q9NTZ6 932 aaKnown RBP12.17□□□□□ -0.46
LINC00538-201ENST00000626109 MTF2Q9Y483 593 aaPredicted RBP12.17□□□□□ -0.46
LINC00538-201ENST00000626109 MYO1CO00159 1063 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 KIAA0355O15063 1070 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 CSDE1O75534 798 aaKnown RBP12.16□□□□□ -0.46
LINC00538-201ENST00000626109 GHRP10912 638 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 UCHL3P15374 230 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 NRLP54845 237 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 AP1B1Q10567 949 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 EML3Q32P44 896 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 FBXO47Q5MNV8 452 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 TRAF7Q6Q0C0 670 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 C4orf50Q6ZRC1 276 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 SYNPOQ8N3V7 929 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 IPMKQ8NFU5 416 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 WHAMMQ8TF30 809 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 TMEM40Q8WWA1 233 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 HLA-CQ95604 372 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 TRIM63Q969Q1 353 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 MAK16Q9BXY0 300 aaKnown RBP12.16□□□□□ -0.46
LINC00538-201ENST00000626109 CAPS2Q9BXY5 557 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 MRPL4Q9BYD3 311 aaKnown RBP12.16□□□□□ -0.46
LINC00538-201ENST00000626109 FZD8Q9H461 694 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 BRD9Q9H8M2 597 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 TRPV5Q9NQA5 729 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 UBAP1Q9NZ09 502 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 SEPT10Q9P0V9 454 aa12.16□□□□□ -0.46
LINC00538-201ENST00000626109 UMODL1Q5DID0 1318 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 A0A087X0T9 212 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 H3BRJ5 948 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 PLOD2O00469 737 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 ACKR2O00590 384 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 CASQ2O14958 399 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms