RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 SLC8A2Q9UPR5 921 aa20.21■□□□□ 0.83
CCDC28A-203ENST00000617445 SPAG17Q6Q759 2223 aa20.21■□□□□ 0.83
CCDC28A-203ENST00000617445 LRP3O75074 770 aa20.2■□□□□ 0.82
CCDC28A-203ENST00000617445 MBL2P11226 248 aaPredicted RBP20.2■□□□□ 0.82
CCDC28A-203ENST00000617445 SDHBP21912 280 aa20.2■□□□□ 0.82
CCDC28A-203ENST00000617445 IFRD2Q12894 506 aaPredicted RBP20.2■□□□□ 0.82
CCDC28A-203ENST00000617445 ZNF658Q5TYW1 1059 aaPredicted RBP20.2■□□□□ 0.82
CCDC28A-203ENST00000617445 SPOPLQ6IQ16 392 aa20.2■□□□□ 0.82
CCDC28A-203ENST00000617445 ADGRG2Q8IZP9 1017 aa20.2■□□□□ 0.82
CCDC28A-203ENST00000617445 SCAMP5Q8TAC9 235 aa20.2■□□□□ 0.82
CCDC28A-203ENST00000617445 SLC2A14Q8TDB8 520 aa20.2■□□□□ 0.82
CCDC28A-203ENST00000617445 TAS1R2Q8TE23 839 aa20.2■□□□□ 0.82
CCDC28A-203ENST00000617445 OTUB2Q96DC9 234 aa20.2■□□□□ 0.82
CCDC28A-203ENST00000617445 TIGD1Q96MW7 591 aa20.2■□□□□ 0.82
CCDC28A-203ENST00000617445 HNRNPABQ99729 332 aaKnown RBP20.2■□□□□ 0.82
CCDC28A-203ENST00000617445 DUSP9Q99956 384 aaKnown RBP20.2■□□□□ 0.82
CCDC28A-203ENST00000617445 FBRSL1Q9HCM7 1045 aaKnown RBP20.2■□□□□ 0.82
CCDC28A-203ENST00000617445 CHORDC1Q9UHD1 332 aaPredicted RBP20.2■□□□□ 0.82
CCDC28A-203ENST00000617445 CACNA1AO00555 2505 aa20.19■□□□□ 0.82
CCDC28A-203ENST00000617445 E2F8A0AVK6 867 aa20.19■□□□□ 0.82
CCDC28A-203ENST00000617445 HRO43593 1189 aa20.19■□□□□ 0.82
CCDC28A-203ENST00000617445 RNF40O75150 1001 aa20.19■□□□□ 0.82
CCDC28A-203ENST00000617445 RETP07949 1114 aa20.19■□□□□ 0.82
CCDC28A-203ENST00000617445 ZDHHC11BP0C7U3 371 aa20.19■□□□□ 0.82
CCDC28A-203ENST00000617445 FAM200BP0CF97 657 aa20.19■□□□□ 0.82
CCDC28A-203ENST00000617445 TRIM49P0CI25 452 aa20.19■□□□□ 0.82
CCDC28A-203ENST00000617445 TRIM49CP0CI26 452 aa20.19■□□□□ 0.82
CCDC28A-203ENST00000617445 EPB41P11171 864 aaKnown RBP20.19■□□□□ 0.82
CCDC28A-203ENST00000617445 PNOCQ13519 176 aa20.19■□□□□ 0.82
CCDC28A-203ENST00000617445 FILIP1Q7Z7B0 1213 aa20.19■□□□□ 0.82
CCDC28A-203ENST00000617445 ENGASEQ8NFI3 743 aa20.19■□□□□ 0.82
CCDC28A-203ENST00000617445 SPATA20Q8TB22 786 aa20.19■□□□□ 0.82
CCDC28A-203ENST00000617445 ACDQ96AP0 544 aa20.19■□□□□ 0.82
CCDC28A-203ENST00000617445 ELMO3Q96BJ8 720 aa20.19■□□□□ 0.82
CCDC28A-203ENST00000617445 TSG101Q99816 390 aa20.19■□□□□ 0.82
CCDC28A-203ENST00000617445 SMOQ99835 787 aa20.19■□□□□ 0.82
CCDC28A-203ENST00000617445 PNPLA8Q9NP80 782 aa20.19■□□□□ 0.82
CCDC28A-203ENST00000617445 C2orf42Q9NWW7 574 aa20.19■□□□□ 0.82
CCDC28A-203ENST00000617445 CCDC130P13994 396 aa20.18■□□□□ 0.82
CCDC28A-203ENST00000617445 PRCPP42785 496 aa20.18■□□□□ 0.82
CCDC28A-203ENST00000617445 DMWDQ09019 674 aa20.18■□□□□ 0.82
CCDC28A-203ENST00000617445 HEATR6Q6AI08 1181 aaKnown RBP20.18■□□□□ 0.82
CCDC28A-203ENST00000617445 PRR23BQ6ZRT6 265 aa20.18■□□□□ 0.82
CCDC28A-203ENST00000617445 SYT13Q7L8C5 426 aa20.18■□□□□ 0.82
CCDC28A-203ENST00000617445 ELOA2Q8IYF1 753 aaPredicted RBP20.18■□□□□ 0.82
CCDC28A-203ENST00000617445 C12orf29Q8N999 325 aa20.18■□□□□ 0.82
CCDC28A-203ENST00000617445 ZMIZ2Q8NF64 920 aa20.18■□□□□ 0.82
CCDC28A-203ENST00000617445 CYFIP2Q96F07 1278 aa20.18■□□□□ 0.82
CCDC28A-203ENST00000617445 APOBEC3GQ9HC16 384 aaKnown RBP20.18■□□□□ 0.82
CCDC28A-203ENST00000617445 TLR8Q9NR97 1041 aaKnown RBP20.18■□□□□ 0.82
CCDC28A-203ENST00000617445 SMPD4Q9NXE4 827 aa20.18■□□□□ 0.82
CCDC28A-203ENST00000617445 CFAP97Q9P2B7 532 aa20.18■□□□□ 0.82
CCDC28A-203ENST00000617445 HMGXB4Q9UGU5 601 aa20.18■□□□□ 0.82
CCDC28A-203ENST00000617445 RALGAPA1Q6GYQ0 2036 aa20.18■□□□□ 0.82
CCDC28A-203ENST00000617445 DMXL1Q9Y485 3027 aa20.17■□□□□ 0.82
CCDC28A-203ENST00000617445 SDK1Q7Z5N4 2213 aa20.17■□□□□ 0.82
CCDC28A-203ENST00000617445 PRR5-ARHGAP8B1AHC4 643 aa20.17■□□□□ 0.82
CCDC28A-203ENST00000617445 SLC16A3O15427 465 aaKnown RBP20.17■□□□□ 0.82
CCDC28A-203ENST00000617445 COCHO43405 550 aa20.17■□□□□ 0.82
CCDC28A-203ENST00000617445 CILPO75339 1184 aa20.17■□□□□ 0.82
CCDC28A-203ENST00000617445 ADH1CP00326 375 aa20.17■□□□□ 0.82
CCDC28A-203ENST00000617445 EIF2DP41214 584 aaKnown RBP20.17■□□□□ 0.82
CCDC28A-203ENST00000617445 MAP3K7CLP57077 242 aa20.17■□□□□ 0.82
CCDC28A-203ENST00000617445 ARHGAP8P85298 464 aa20.17■□□□□ 0.82
CCDC28A-203ENST00000617445 FKBP3Q00688 224 aaKnown RBP20.17■□□□□ 0.82
CCDC28A-203ENST00000617445 LMNB2Q03252 620 aa20.17■□□□□ 0.82
CCDC28A-203ENST00000617445 PUM1Q14671 1186 aaKnown RBP eCLIP20.17■□□□□ 0.82
CCDC28A-203ENST00000617445 DHCR24Q15392 516 aa20.17■□□□□ 0.82
CCDC28A-203ENST00000617445 PKN3Q6P5Z2 889 aa20.17■□□□□ 0.82
CCDC28A-203ENST00000617445 SMYD4Q8IYR2 804 aaPredicted RBP20.17■□□□□ 0.82
CCDC28A-203ENST00000617445 FBXL13Q8NEE6 735 aa20.17■□□□□ 0.82
CCDC28A-203ENST00000617445 SMARCE1Q969G3 411 aa20.17■□□□□ 0.82
CCDC28A-203ENST00000617445 FAM49BQ9NUQ9 324 aa20.17■□□□□ 0.82
CCDC28A-203ENST00000617445 MYOFQ9NZM1 2061 aa20.17■□□□□ 0.82
CCDC28A-203ENST00000617445 FOXD2O60548 495 aaPredicted RBP20.16■□□□□ 0.82
CCDC28A-203ENST00000617445 BEST1O76090 585 aa20.16■□□□□ 0.82
CCDC28A-203ENST00000617445 CYP17A1P05093 508 aa20.16■□□□□ 0.82
CCDC28A-203ENST00000617445 OPRD1P41143 372 aa20.16■□□□□ 0.82
CCDC28A-203ENST00000617445 MXI1P50539 228 aa20.16■□□□□ 0.82
CCDC28A-203ENST00000617445 LRRC63Q05C16 580 aa20.16■□□□□ 0.82
CCDC28A-203ENST00000617445 CEP68Q76N32 757 aa20.16■□□□□ 0.82
CCDC28A-203ENST00000617445 RPLP0P6Q8NHW5 317 aa20.16■□□□□ 0.82
CCDC28A-203ENST00000617445 RMDN1Q96DB5 314 aa20.16■□□□□ 0.82
CCDC28A-203ENST00000617445 NACA2Q9H009 215 aa20.16■□□□□ 0.82
CCDC28A-203ENST00000617445 MMRN2Q9H8L6 949 aa20.16■□□□□ 0.82
CCDC28A-203ENST00000617445 RAB20Q9NX57 234 aa20.16■□□□□ 0.82
CCDC28A-203ENST00000617445 GMIPQ9P107 970 aa20.16■□□□□ 0.82
CCDC28A-203ENST00000617445 SCML2Q9UQR0 700 aa20.16■□□□□ 0.82
CCDC28A-203ENST00000617445 PCDHA5Q9Y5H7 936 aa20.16■□□□□ 0.82
CCDC28A-203ENST00000617445 DCHS1Q96JQ0 3298 aa20.15■□□□□ 0.82
CCDC28A-203ENST00000617445 ADORA2BP29275 332 aa20.15■□□□□ 0.82
CCDC28A-203ENST00000617445 PPP1R2P41236 205 aa20.15■□□□□ 0.82
CCDC28A-203ENST00000617445 ORC1Q13415 861 aa20.15■□□□□ 0.82
CCDC28A-203ENST00000617445 STIM1Q13586 685 aa20.15■□□□□ 0.82
CCDC28A-203ENST00000617445 PREPLQ4J6C6 727 aaPredicted RBP20.15■□□□□ 0.82
CCDC28A-203ENST00000617445 NAIF1Q69YI7 327 aaPredicted RBP20.15■□□□□ 0.82
CCDC28A-203ENST00000617445 CLEC20AQ6ZU45 233 aa20.15■□□□□ 0.82
CCDC28A-203ENST00000617445 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.15■□□□□ 0.82
CCDC28A-203ENST00000617445 ZC3H3Q8IXZ2 948 aaKnown RBP20.15■□□□□ 0.82
CCDC28A-203ENST00000617445 WHAMMQ8TF30 809 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms