RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 MYO16Q9Y6X6 1858 aa27.15■■□□□ 1.94
TRIM28-204ENST00000594806 HEPACAM2A8MVW5 462 aa27.15■■□□□ 1.94
TRIM28-204ENST00000594806 M0QYV0 167 aa27.15■■□□□ 1.94
TRIM28-204ENST00000594806 THAP12O43422 761 aa27.15■■□□□ 1.94
TRIM28-204ENST00000594806 SERPINC1P01008 464 aa27.15■■□□□ 1.94
TRIM28-204ENST00000594806 PFKPQ01813 784 aa27.15■■□□□ 1.94
TRIM28-204ENST00000594806 GPRIN1Q7Z2K8 1008 aa27.15■■□□□ 1.94
TRIM28-204ENST00000594806 UBA3Q8TBC4 463 aa27.15■■□□□ 1.94
TRIM28-204ENST00000594806 HSFY1Q96LI6 401 aa27.15■■□□□ 1.94
TRIM28-204ENST00000594806 TRMT61BQ9BVS5 477 aaKnown RBP27.15■■□□□ 1.94
TRIM28-204ENST00000594806 PLA2G2FQ9BZM2 168 aa27.15■■□□□ 1.94
TRIM28-204ENST00000594806 EPHX3Q9H6B9 360 aa27.15■■□□□ 1.94
TRIM28-204ENST00000594806 LRRC4Q9HBW1 653 aa27.15■■□□□ 1.94
TRIM28-204ENST00000594806 FAM207AQ9NSI2 230 aaPredicted RBP27.15■■□□□ 1.94
TRIM28-204ENST00000594806 CHORDC1Q9UHD1 332 aaPredicted RBP27.15■■□□□ 1.94
TRIM28-204ENST00000594806 A0A1B0GTH6 734 aa27.14■■□□□ 1.94
TRIM28-204ENST00000594806 CYP26A1O43174 497 aa27.14■■□□□ 1.94
TRIM28-204ENST00000594806 OLFM2O95897 454 aa27.14■■□□□ 1.94
TRIM28-204ENST00000594806 ABL1P00519 1130 aa27.14■■□□□ 1.94
TRIM28-204ENST00000594806 OAS1P00973 400 aaKnown RBP27.14■■□□□ 1.94
TRIM28-204ENST00000594806 TCF3P15923 654 aa27.14■■□□□ 1.94
TRIM28-204ENST00000594806 VIPR2P41587 438 aa27.14■■□□□ 1.94
TRIM28-204ENST00000594806 HECTD3Q5T447 861 aa27.14■■□□□ 1.94
TRIM28-204ENST00000594806 VITQ6UXI7 678 aa27.14■■□□□ 1.94
TRIM28-204ENST00000594806 TRIM67Q6ZTA4 783 aa27.14■■□□□ 1.94
TRIM28-204ENST00000594806 SCML4Q8N228 414 aa27.14■■□□□ 1.94
TRIM28-204ENST00000594806 ARHGAP18Q8N392 663 aa27.14■■□□□ 1.94
TRIM28-204ENST00000594806 ZNF276Q8N554 614 aa27.14■■□□□ 1.94
TRIM28-204ENST00000594806 GMIPQ9P107 970 aa27.14■■□□□ 1.94
TRIM28-204ENST00000594806 WNT16Q9UBV4 365 aa27.14■■□□□ 1.94
TRIM28-204ENST00000594806 C2orf78A6NCI8 922 aa27.13■■□□□ 1.93
TRIM28-204ENST00000594806 CKMP06732 381 aa27.13■■□□□ 1.93
TRIM28-204ENST00000594806 CLCN1P35523 988 aa27.13■■□□□ 1.93
TRIM28-204ENST00000594806 TKTL1P51854 596 aa27.13■■□□□ 1.93
TRIM28-204ENST00000594806 POLR2FP61218 127 aaKnown RBP27.13■■□□□ 1.93
TRIM28-204ENST00000594806 SLC7A9P82251 487 aa27.13■■□□□ 1.93
TRIM28-204ENST00000594806 FCHO2Q0JRZ9 810 aa27.13■■□□□ 1.93
TRIM28-204ENST00000594806 YAF2Q8IY57 180 aa27.13■■□□□ 1.93
TRIM28-204ENST00000594806 KIAA1958Q8N8K9 716 aa27.13■■□□□ 1.93
TRIM28-204ENST00000594806 ARL14EPQ8N8R7 260 aaPredicted RBP27.13■■□□□ 1.93
TRIM28-204ENST00000594806 BPIFB1Q8TDL5 484 aa27.13■■□□□ 1.93
TRIM28-204ENST00000594806 STK32AQ8WU08 396 aa27.13■■□□□ 1.93
TRIM28-204ENST00000594806 IRF7Q92985 503 aa27.13■■□□□ 1.93
TRIM28-204ENST00000594806 USP13Q92995 863 aaPredicted RBP27.13■■□□□ 1.93
TRIM28-204ENST00000594806 SECISBP2LQ93073 1101 aaKnown RBP27.13■■□□□ 1.93
TRIM28-204ENST00000594806 TRPV5Q9NQA5 729 aa27.13■■□□□ 1.93
TRIM28-204ENST00000594806 PCDHGC3Q9UN70 934 aa27.13■■□□□ 1.93
TRIM28-204ENST00000594806 ARHGAP26Q9UNA1 814 aa27.13■■□□□ 1.93
TRIM28-204ENST00000594806 A0A1W2PQC6 194 aa27.12■■□□□ 1.93
TRIM28-204ENST00000594806 F8VZ95 297 aa27.12■■□□□ 1.93
TRIM28-204ENST00000594806 PRAMEF12O95522 483 aa27.12■■□□□ 1.93
TRIM28-204ENST00000594806 GPD2P43304 727 aa27.12■■□□□ 1.93
TRIM28-204ENST00000594806 KLK7P49862 253 aa27.12■■□□□ 1.93
TRIM28-204ENST00000594806 ZNF445P59923 1031 aa27.12■■□□□ 1.93
TRIM28-204ENST00000594806 PM20D1Q6GTS8 502 aa27.12■■□□□ 1.93
TRIM28-204ENST00000594806 TADA2BQ86TJ2 420 aa27.12■■□□□ 1.93
TRIM28-204ENST00000594806 ST13P5Q8NFI4 369 aaPredicted RBP27.12■■□□□ 1.93
TRIM28-204ENST00000594806 CDK5RAP1Q96SZ6 601 aaKnown RBP27.12■■□□□ 1.93
TRIM28-204ENST00000594806 CYLDQ9NQC7 956 aa27.12■■□□□ 1.93
TRIM28-204ENST00000594806 CNGB3Q9NQW8 809 aa27.12■■□□□ 1.93
TRIM28-204ENST00000594806 THG1LQ9NWX6 298 aaKnown RBP27.12■■□□□ 1.93
TRIM28-204ENST00000594806 TECTAO75443 2155 aa27.11■■□□□ 1.93
TRIM28-204ENST00000594806 CHADO15335 359 aa27.11■■□□□ 1.93
TRIM28-204ENST00000594806 NARSO43776 548 aaKnown RBP27.11■■□□□ 1.93
TRIM28-204ENST00000594806 ZBED1O96006 694 aa27.11■■□□□ 1.93
TRIM28-204ENST00000594806 GPC5P78333 572 aa27.11■■□□□ 1.93
TRIM28-204ENST00000594806 PLCB2Q00722 1185 aa27.11■■□□□ 1.93
TRIM28-204ENST00000594806 NR1I3Q14994 352 aa27.11■■□□□ 1.93
TRIM28-204ENST00000594806 ARHGAP29Q52LW3 1261 aa27.11■■□□□ 1.93
TRIM28-204ENST00000594806 DNASE1L2Q92874 299 aa27.11■■□□□ 1.93
TRIM28-204ENST00000594806 SPAG5Q96R06 1193 aa27.11■■□□□ 1.93
TRIM28-204ENST00000594806 SLC22A12Q96S37 553 aa27.11■■□□□ 1.93
TRIM28-204ENST00000594806 CYP2S1Q96SQ9 504 aa27.11■■□□□ 1.93
TRIM28-204ENST00000594806 LHX5Q9H2C1 402 aa27.11■■□□□ 1.93
TRIM28-204ENST00000594806 CLIC5Q9NZA1 410 aa27.11■■□□□ 1.93
TRIM28-204ENST00000594806 HELZP42694 1942 aaKnown RBP27.11■■□□□ 1.93
TRIM28-204ENST00000594806 MUC3AQ02505 3323 aa27.1■■□□□ 1.93
TRIM28-204ENST00000594806 TULP2O00295 520 aa27.1■■□□□ 1.93
TRIM28-204ENST00000594806 ZNF263O14978 683 aa27.1■■□□□ 1.93
TRIM28-204ENST00000594806 TEX33O43247 280 aa27.1■■□□□ 1.93
TRIM28-204ENST00000594806 GPR37L1O60883 481 aa27.1■■□□□ 1.93
TRIM28-204ENST00000594806 CALCAP01258 141 aa27.1■■□□□ 1.93
TRIM28-204ENST00000594806 RALAP11233 206 aa27.1■■□□□ 1.93
TRIM28-204ENST00000594806 KRT9P35527 623 aa27.1■■□□□ 1.93
TRIM28-204ENST00000594806 ACADSBP45954 432 aa27.1■■□□□ 1.93
TRIM28-204ENST00000594806 RPL34P49207 117 aaKnown RBP27.1■■□□□ 1.93
TRIM28-204ENST00000594806 JAM2P57087 298 aa27.1■■□□□ 1.93
TRIM28-204ENST00000594806 FANCCQ00597 558 aa27.1■■□□□ 1.93
TRIM28-204ENST00000594806 PMF1Q6P1K2 205 aa27.1■■□□□ 1.93
TRIM28-204ENST00000594806 KLHDC10Q6PID8 442 aa27.1■■□□□ 1.93
TRIM28-204ENST00000594806 SLC47A2Q86VL8 602 aa27.1■■□□□ 1.93
TRIM28-204ENST00000594806 DDX42Q86XP3 938 aaKnown RBP eCLIP27.1■■□□□ 1.93
TRIM28-204ENST00000594806 FMNL3Q8IVF7 1028 aa27.1■■□□□ 1.93
TRIM28-204ENST00000594806 SIX6OS1Q8N1H7 587 aa27.1■■□□□ 1.93
TRIM28-204ENST00000594806 RSPRY1Q96DX4 576 aa27.1■■□□□ 1.93
TRIM28-204ENST00000594806 BRD9Q9H8M2 597 aa27.1■■□□□ 1.93
TRIM28-204ENST00000594806 ACP6Q9NPH0 428 aa27.1■■□□□ 1.93
TRIM28-204ENST00000594806 FBXL21Q9UKT6 434 aa27.1■■□□□ 1.93
TRIM28-204ENST00000594806 FBXO21O94952 628 aa27.09■■□□□ 1.93
TRIM28-204ENST00000594806 GDI1P31150 447 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms