RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 THAP9Q9H5L6 903 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 METTL14Q9HCE5 456 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 ZNF334Q9HCZ1 680 aaPredicted RBP10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 FANCLQ9NW38 375 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 ABI2Q9NYB9 513 aaPredicted RBP10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 ATXN7L1Q9ULK2 861 aaPredicted RBP10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 NFE2L3Q9Y4A8 694 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 WDFY4Q6ZS81 3184 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 MTCL1Q9Y4B5 1905 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 C2CD4DB7Z1M9 353 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 AFPP02771 609 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 VSIG8P0DPA2 414 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 HAPLN1P10915 354 aaPredicted RBP10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 GJA1P17302 382 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 PTPN1P18031 435 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 SLC9A1P19634 815 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 MZF1P28698 734 aaPredicted RBP10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 HOXA9P31269 272 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 GNL1P36915 607 aaPredicted RBP10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 LHX1P48742 406 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 INCA1Q0VD86 236 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 ZSCAN23Q3MJ62 389 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 GJB7Q6PEY0 223 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 APTXQ7Z2E3 356 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 ACOT1Q86TX2 421 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 TMC8Q8IU68 726 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 CREBRFQ8IUR6 639 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 DHX40Q8IX18 779 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 THEM5Q8N1Q8 247 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 AOPEPQ8N6M6 819 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 GPR161Q8N6U8 529 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 C12orf29Q8N999 325 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 EDEM1Q92611 657 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 TAF4BQ92750 862 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 PCED1BQ96HM7 432 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 RPGRIP1Q96KN7 1286 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 KREMEN1Q96MU8 473 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 MYADMQ96S97 322 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 CRACR2AQ9BSW2 395 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 B3GNT5Q9BYG0 378 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 ZNF518BQ9C0D4 1074 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 WDR6Q9NNW5 1121 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 ANO10Q9NW15 660 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 CDH9Q9ULB4 789 aa10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 R3HCC1Q9Y3T6 440 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.08□□□□□ -0.8
NPLOC4-219ENST00000576713 CLUHO75153 1309 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 A8MXQ7 604 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 KCNJ18B7U540 433 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 LOC730098B7Z3J9 87 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 RNF225M0QZC1 329 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 PMM2O15305 246 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 STX10O60499 249 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 CILPO75339 1184 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 CLSTN1O94985 981 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 GNA14O95837 355 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 HNRNPA1P09651 372 aaKnown RBP eCLIP10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 CCDC192P0DO97 292 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 ATP1A3P13637 1013 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 CCDC130P13994 396 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 EPB42P16452 691 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 ZNF18P17022 549 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 HMGA1P17096 107 aaKnown RBP10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 ACO1P21399 889 aaKnown RBP10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 BDNFP23560 247 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 TSPY1Q01534 308 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 CUL2Q13617 745 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 KCNJ12Q14500 433 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 PTPN21Q16825 1174 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 DDR2Q16832 855 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 UVSSAQ2YD98 709 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 MGAT5BQ3V5L5 792 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 ZNF394Q53GI3 561 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 TCP11X2Q5H9J9 407 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 PRSS36Q5K4E3 855 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 CES5AQ6NT32 575 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 RRAGAQ7L523 313 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 ADHFE1Q8IWW8 467 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 FUKQ8N0W3 1084 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 B3GALNT2Q8NCR0 500 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 MYCBPAPQ8TBZ2 947 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 SPATA18Q8TC71 538 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 GIPC2Q8TF65 315 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 ING5Q8WYH8 240 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 SEPT5Q99719 369 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 ZSWIM1Q9BR11 485 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 PHF7Q9BWX1 381 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 OXCT2Q9BYC2 517 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 INTS2Q9H0H0 1204 aaKnown RBP10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 SNX25Q9H3E2 840 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 SMOC2Q9H3U7 446 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 SIX2Q9NPC8 291 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 CISHQ9NSE2 258 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 TAB2Q9NYJ8 693 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 PRKAG3Q9UGI9 489 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 PCDHB5Q9Y5E4 795 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 NCANO14594 1321 aa10.07□□□□□ -0.8
NPLOC4-219ENST00000576713 DOCK6Q96HP0 2047 aa10.06□□□□□ -0.8
NPLOC4-219ENST00000576713 BEST1O76090 585 aa10.06□□□□□ -0.8
NPLOC4-219ENST00000576713 LRG1P02750 347 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms