RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 IL31Q6EBC2 164 aa5.67□□□□□ -1.5
USP8-218ENST00000561330 MZT2AQ6P582 158 aa5.67□□□□□ -1.5
USP8-218ENST00000561330 BEND5Q7L4P6 421 aa5.67□□□□□ -1.5
USP8-218ENST00000561330 DPP9Q86TI2 863 aa5.67□□□□□ -1.5
USP8-218ENST00000561330 RNF152Q8N8N0 203 aa5.67□□□□□ -1.5
USP8-218ENST00000561330 ZNF384Q8TF68 577 aa5.67□□□□□ -1.5
USP8-218ENST00000561330 COLEC11Q9BWP8 271 aa5.67□□□□□ -1.5
USP8-218ENST00000561330 FSD1LQ9BXM9 530 aa5.67□□□□□ -1.5
USP8-218ENST00000561330 HEYLQ9NQ87 328 aaPredicted RBP5.67□□□□□ -1.5
USP8-218ENST00000561330 STARD7Q9NQZ5 370 aa5.67□□□□□ -1.5
USP8-218ENST00000561330 AP4M1O00189 453 aa5.66□□□□□ -1.5
USP8-218ENST00000561330 APOL1O14791 398 aa5.66□□□□□ -1.5
USP8-218ENST00000561330 AREL1O15033 823 aa5.66□□□□□ -1.5
USP8-218ENST00000561330 SNX2O60749 519 aa5.66□□□□□ -1.5
USP8-218ENST00000561330 C1RP00736 705 aa5.66□□□□□ -1.5
USP8-218ENST00000561330 FGFR2P21802 821 aa5.66□□□□□ -1.5
USP8-218ENST00000561330 CTGFP29279 349 aa5.66□□□□□ -1.5
USP8-218ENST00000561330 AK2P54819 239 aa5.66□□□□□ -1.5
USP8-218ENST00000561330 TIRAPP58753 221 aa5.66□□□□□ -1.5
USP8-218ENST00000561330 E2F1Q01094 437 aa5.66□□□□□ -1.5
USP8-218ENST00000561330 CYP1B1Q16678 543 aa5.66□□□□□ -1.5
USP8-218ENST00000561330 KRTAP5-3Q6L8H2 238 aa5.66□□□□□ -1.5
USP8-218ENST00000561330 DPY19L3Q6ZPD9 716 aa5.66□□□□□ -1.5
USP8-218ENST00000561330 SIRT6Q8N6T7 355 aa5.66□□□□□ -1.5
USP8-218ENST00000561330 VGLL2Q8N8G2 317 aa5.66□□□□□ -1.5
USP8-218ENST00000561330 PARD3BQ8TEW8 1205 aa5.66□□□□□ -1.5
USP8-218ENST00000561330 ZCWPW1Q9H0M4 648 aa5.66□□□□□ -1.5
USP8-218ENST00000561330 PTGFRNQ9P2B2 879 aa5.66□□□□□ -1.5
USP8-218ENST00000561330 DNAJB11Q9UBS4 358 aa5.66□□□□□ -1.5
USP8-218ENST00000561330 A0A1W2PPC4 97 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 CLCA1A8K7I4 914 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 TARM1B6A8C7 271 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 ZNF213O14771 459 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 PLIN1O60240 522 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 JTBO76095 146 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 GKP32189 559 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 NEK3P51956 506 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 SUMO2P61956 95 aaKnown RBP5.65□□□□□ -1.5
USP8-218ENST00000561330 NHLH1Q02575 133 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 MAP9Q49MG5 647 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 L1TD1Q5T7N2 865 aaKnown RBP5.65□□□□□ -1.5
USP8-218ENST00000561330 MANEALQ5VSG8 457 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 SUMO4Q6EEV6 95 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 NAPRTQ6XQN6 538 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 KRT28Q7Z3Y7 464 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 LRRC46Q96FV0 321 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 HIST1H2AAQ96QV6 131 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 PRR25Q96S07 402 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 MAGEB5Q9BZ81 275 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 TRIM36Q9NQ86 728 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 SH3BP4Q9P0V3 963 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 MYO1AQ9UBC5 1043 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 AMFRQ9UKV5 643 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 PHTF1Q9UMS5 762 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 HPSEQ9Y251 543 aa5.65□□□□□ -1.5
USP8-218ENST00000561330 RASA4BC9J798 803 aa5.64□□□□□ -1.51
USP8-218ENST00000561330 M0R3H8 397 aa5.64□□□□□ -1.51
USP8-218ENST00000561330 CES2O00748 559 aa5.64□□□□□ -1.51
USP8-218ENST00000561330 RASA4O43374 803 aa5.64□□□□□ -1.51
USP8-218ENST00000561330 PMPCBO75439 489 aa5.64□□□□□ -1.51
USP8-218ENST00000561330 MYCLP12524 364 aaPredicted RBP5.64□□□□□ -1.51
USP8-218ENST00000561330 CD19P15391 556 aa5.64□□□□□ -1.51
USP8-218ENST00000561330 TNFSF4P23510 183 aa5.64□□□□□ -1.51
USP8-218ENST00000561330 TM4SF4P48230 202 aa5.64□□□□□ -1.51
USP8-218ENST00000561330 ALDH5A1P51649 535 aaPredicted RBP5.64□□□□□ -1.51
USP8-218ENST00000561330 CYP4F2P78329 520 aa5.64□□□□□ -1.51
USP8-218ENST00000561330 FAM209BQ5JX69 171 aa5.64□□□□□ -1.51
USP8-218ENST00000561330 FCRLBQ6BAA4 426 aa5.64□□□□□ -1.51
USP8-218ENST00000561330 CATSPERGQ6ZRH7 1159 aa5.64□□□□□ -1.51
USP8-218ENST00000561330 NOL8Q76FK4 1167 aaKnown RBP5.64□□□□□ -1.51
USP8-218ENST00000561330 CCDC146Q8IYE0 955 aa5.64□□□□□ -1.51
USP8-218ENST00000561330 CCDC150Q8NCX0 1101 aa5.64□□□□□ -1.51
USP8-218ENST00000561330 ZDHHC12Q96GR4 267 aa5.64□□□□□ -1.51
USP8-218ENST00000561330 CCDC138Q96M89 665 aa5.64□□□□□ -1.51
USP8-218ENST00000561330 LENG8Q96PV6 779 aaPredicted RBP5.64□□□□□ -1.51
USP8-218ENST00000561330 GJB4Q9NTQ9 266 aa5.64□□□□□ -1.51
USP8-218ENST00000561330 AGPSO00116 658 aa5.63□□□□□ -1.51
USP8-218ENST00000561330 EXOC5O00471 708 aa5.63□□□□□ -1.51
USP8-218ENST00000561330 PDE8BO95263 885 aa5.63□□□□□ -1.51
USP8-218ENST00000561330 MYL4P12829 197 aa5.63□□□□□ -1.51
USP8-218ENST00000561330 CD38P28907 300 aa5.63□□□□□ -1.51
USP8-218ENST00000561330 NTSR1P30989 418 aa5.63□□□□□ -1.51
USP8-218ENST00000561330 ATICP31939 592 aa5.63□□□□□ -1.51
USP8-218ENST00000561330 HOXA4Q00056 320 aaPredicted RBP5.63□□□□□ -1.51
USP8-218ENST00000561330 ARL13BQ3SXY8 428 aa5.63□□□□□ -1.51
USP8-218ENST00000561330 HIBCHQ6NVY1 386 aaPredicted RBP5.63□□□□□ -1.51
USP8-218ENST00000561330 DPY19L2P1Q6NXN4 242 aa5.63□□□□□ -1.51
USP8-218ENST00000561330 CLEC9AQ6UXN8 241 aa5.63□□□□□ -1.51
USP8-218ENST00000561330 BRI3BPQ8WY22 251 aa5.63□□□□□ -1.51
USP8-218ENST00000561330 ZNF764Q96H86 408 aaPredicted RBP5.63□□□□□ -1.51
USP8-218ENST00000561330 TNIP3Q96KP6 325 aa5.63□□□□□ -1.51
USP8-218ENST00000561330 FAM227BQ96M60 508 aa5.63□□□□□ -1.51
USP8-218ENST00000561330 RIPOR3Q96MK2 946 aa5.63□□□□□ -1.51
USP8-218ENST00000561330 MYD88Q99836 296 aa5.63□□□□□ -1.51
USP8-218ENST00000561330 THAP7Q9BT49 309 aaPredicted RBP5.63□□□□□ -1.51
USP8-218ENST00000561330 AS3MTQ9HBK9 375 aa5.63□□□□□ -1.51
USP8-218ENST00000561330 NKX1-2Q9UD57 310 aaPredicted RBP5.63□□□□□ -1.51
USP8-218ENST00000561330 RIMKLBQ9ULI2 386 aa5.63□□□□□ -1.51
USP8-218ENST00000561330 NCK2O43639 380 aa5.62□□□□□ -1.51
USP8-218ENST00000561330 EXOC3O60645 756 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms